RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 CELF6Q96J87 481 aaKnown RBP12.7□□□□□ -0.38
SNX17-208ENST00000493711 MS4A14Q96JA4 679 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 CAPZA3Q96KX2 299 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 VAT1Q99536 393 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 SP110Q9HB58 689 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 C11orf16Q9NQ32 467 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 AMACRQ9UHK6 382 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 SLC25A13Q9UJS0 675 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 CLEC4EQ9ULY5 219 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 PLA2G4CQ9UP65 541 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 DRG1Q9Y295 367 aaKnown RBP12.7□□□□□ -0.38
SNX17-208ENST00000493711 VPS9D1Q9Y2B5 631 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 A0A0D9SEW6 157 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 BCLAF3A2AJT9 711 aaKnown RBP12.69□□□□□ -0.38
SNX17-208ENST00000493711 TK2O00142 265 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 CBX4O00257 560 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 MATN3O15232 486 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 MAFKO60675 156 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 SRPRAP08240 638 aaKnown RBP12.69□□□□□ -0.38
SNX17-208ENST00000493711 DLDP09622 509 aaKnown RBP12.69□□□□□ -0.38
SNX17-208ENST00000493711 RBP3P10745 1247 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 PECAM1P16284 738 aaPredicted RBP12.69□□□□□ -0.38
SNX17-208ENST00000493711 MZF1P28698 734 aaPredicted RBP12.69□□□□□ -0.38
SNX17-208ENST00000493711 CHRNA3P32297 505 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 HSPA9P38646 679 aaKnown RBP12.69□□□□□ -0.38
SNX17-208ENST00000493711 SLC6A11P48066 632 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 FNTAP49354 379 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 GALK1P51570 392 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 RENBPP51606 427 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 ST8SIA6P61647 398 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 ECT2LQ008S8 904 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 SLC10A2Q12908 348 aaPredicted RBP12.69□□□□□ -0.38
SNX17-208ENST00000493711 BYSLQ13895 437 aaKnown RBP12.69□□□□□ -0.38
SNX17-208ENST00000493711 PRKD1Q15139 912 aaPredicted RBP12.69□□□□□ -0.38
SNX17-208ENST00000493711 CYP1B1Q16678 543 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 FUT11Q495W5 492 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 INO80DQ53TQ3 878 aaPredicted RBP12.69□□□□□ -0.38
SNX17-208ENST00000493711 SLC45A4Q5BKX6 768 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 TMEM196Q5HYL7 178 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 DARS2Q6PI48 645 aaKnown RBP12.69□□□□□ -0.38
SNX17-208ENST00000493711 NPNTQ6UXI9 565 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 ZNF572Q7Z3I7 529 aaPredicted RBP12.69□□□□□ -0.38
SNX17-208ENST00000493711 ADIPOR2Q86V24 386 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 C12orf40Q86WS4 652 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 CCDC13Q8IYE1 715 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 PHTF2Q8N3S3 785 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 CEP112Q8N8E3 955 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 C12orf50Q8NA57 414 aaPredicted RBP12.69□□□□□ -0.38
SNX17-208ENST00000493711 OR7D4Q8NG98 312 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 SLC35B2Q8TB61 432 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 GRK7Q8WTQ7 553 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 FAM3CQ92520 227 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 QKIQ96PU8 341 aaKnown RBP eCLIP12.69□□□□□ -0.38
SNX17-208ENST00000493711 HERPUD2Q9BSE4 406 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 ARHGEF3Q9NR81 526 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 WDR70Q9NW82 654 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 ELOVL2Q9NXB9 296 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 MFHAS1Q9Y4C4 1052 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 MRFAP1Q9Y605 127 aa12.69□□□□□ -0.38
SNX17-208ENST00000493711 HELZP42694 1942 aaKnown RBP12.68□□□□□ -0.38
SNX17-208ENST00000493711 TCRBV7S2A1N4TA0A589 114 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 FAM86C2PA6NEL3 165 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 LIASO43766 372 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 PHF2O75151 1096 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 ZMPSTE24O75844 475 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 NEBLO76041 1014 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 ITGAVP06756 1048 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 ACVRL1P37023 503 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 KDSRQ06136 332 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 AP1B1Q10567 949 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 HNRNPDQ14103 355 aaKnown RBP12.68□□□□□ -0.38
SNX17-208ENST00000493711 LRRC32Q14392 662 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 SIX1Q15475 284 aaPredicted RBP12.68□□□□□ -0.38
SNX17-208ENST00000493711 HSF5Q4G112 596 aaPredicted RBP12.68□□□□□ -0.38
SNX17-208ENST00000493711 DGKKQ5KSL6 1271 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 HEATR6Q6AI08 1181 aaKnown RBP12.68□□□□□ -0.38
SNX17-208ENST00000493711 C4orf22Q6V702 233 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 TPRG1Q6ZUI0 275 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 TRMT11Q7Z4G4 463 aaKnown RBP12.68□□□□□ -0.38
SNX17-208ENST00000493711 ADAT2Q7Z6V5 191 aaKnown RBP12.68□□□□□ -0.38
SNX17-208ENST00000493711 APCDD1Q8J025 514 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 SYNPOQ8N3V7 929 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 PRELID2Q8N945 189 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 OR52K2Q8NGK3 314 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 ATL2Q8NHH9 583 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 MAGOHBQ96A72 148 aaKnown RBP12.68□□□□□ -0.38
SNX17-208ENST00000493711 CHFRQ96EP1 664 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 CIPCQ9C0C6 399 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 CEP44Q9C0F1 390 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 SAE1Q9UBE0 346 aaPredicted RBP12.68□□□□□ -0.38
SNX17-208ENST00000493711 UBA2Q9UBT2 640 aaPredicted RBP12.68□□□□□ -0.38
SNX17-208ENST00000493711 VPS51Q9UID3 782 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 TRHDEQ9UKU6 1024 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 INTS6Q9UL03 887 aaKnown RBP12.68□□□□□ -0.38
SNX17-208ENST00000493711 ZNF148Q9UQR1 794 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 HS3ST2Q9Y278 367 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 STARD13Q9Y3M8 1113 aa12.68□□□□□ -0.38
SNX17-208ENST00000493711 DOCK6Q96HP0 2047 aa12.67□□□□□ -0.38
SNX17-208ENST00000493711 TCF20Q9UGU0 1960 aaKnown RBP12.67□□□□□ -0.38
SNX17-208ENST00000493711 MUC6Q6W4X9 2439 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms