RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 RXRGP48443 463 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 CLCN6P51797 869 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 CLDN6P56747 220 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 TAS2R38P59533 333 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 KRT83P78385 493 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 DEUP1Q05D60 604 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 CYP4F3Q08477 520 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 OVGP1Q12889 678 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 STAT4Q14765 748 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 DRAP1Q14919 205 aaPredicted RBP9.34□□□□□ -0.91
NFIA-213ENST00000493627 HSP90AA4PQ58FG1 418 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 MIIPQ5JXC2 388 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 PIP5KL1Q5T9C9 394 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 TAF3Q5VWG9 929 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 DPY19L2P1Q6NXN4 242 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 TFAP2DQ7Z6R9 452 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 SETD3Q86TU7 594 aaPredicted RBP9.34□□□□□ -0.91
NFIA-213ENST00000493627 IQCHQ86VS3 1027 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 TMPRSS12Q86WS5 348 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 SPATS2Q86XZ4 545 aaKnown RBP9.34□□□□□ -0.91
NFIA-213ENST00000493627 XYLT1Q86Y38 959 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 PDCD7Q8N8D1 485 aaKnown RBP9.34□□□□□ -0.91
NFIA-213ENST00000493627 ATP11CQ8NB49 1132 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 TMEM145Q8NBT3 493 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 OR2A12Q8NGT7 310 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 NT5C3BQ969T7 300 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 PGAP3Q96FM1 320 aaPredicted RBP9.34□□□□□ -0.91
NFIA-213ENST00000493627 TBCBQ99426 244 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 MYOCQ99972 504 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 TUBGCP2Q9BSJ2 902 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 CLSTN2Q9H4D0 955 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 PREBQ9HCU5 417 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 CA5BQ9Y2D0 317 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 ACACAQ13085 2346 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 LOC400499M0QZD8 3231 aa9.34□□□□□ -0.91
NFIA-213ENST00000493627 IGLV3-10A0A075B6K4 115 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 A0A0D9SEW6 157 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 A0A1W2PQU0 124 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 DRGXA6NNA5 263 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 E9PAM4 449 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 PRAMEF26H0Y7S4 382 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 PES1O00541 588 aaKnown RBP9.33□□□□□ -0.92
NFIA-213ENST00000493627 RNGTTO60942 597 aaKnown RBP9.33□□□□□ -0.92
NFIA-213ENST00000493627 SDC3O75056 442 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 LSM8O95777 96 aaKnown RBP9.33□□□□□ -0.92
NFIA-213ENST00000493627 F9P00740 461 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 C1SP09871 688 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 CDK4P11802 303 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 PRLRP16471 622 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 RRM1P23921 792 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 CHRNA3P32297 505 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 HNF1BP35680 557 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 FLT3P36888 993 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 GABRB2P47870 512 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 KCNMA1Q12791 1236 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 BNIP3Q12983 259 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 COL9A2Q14055 689 aaPredicted RBP9.33□□□□□ -0.92
NFIA-213ENST00000493627 SLC25A52Q3SY17 297 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 C2CD6Q53TS8 623 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 C6orf118Q5T5N4 469 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 HES3Q5TGS1 186 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 KLHDC7AQ5VTJ3 777 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 C22orf39Q6P5X5 142 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 LRRC31Q6UY01 552 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 LINGO4Q6UY18 593 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 KANSL1Q7Z3B3 1105 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 NOP9Q86U38 636 aaKnown RBP9.33□□□□□ -0.92
NFIA-213ENST00000493627 PDZD3Q86UT5 571 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 ERICH1Q86X53 443 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 MSANTD4Q8NCY6 345 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 GRIN3AQ8TCU5 1115 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 TSC1Q92574 1164 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 ARRDC3Q96B67 414 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 NXPE2Q96DL1 559 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 C18orf8Q96DM3 657 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 SCUBE2Q9NQ36 999 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 DYRK4Q9NR20 520 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 TMPRSS4Q9NRS4 437 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 MPP6Q9NZW5 540 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 DACH1Q9UI36 760 aa9.33□□□□□ -0.92
NFIA-213ENST00000493627 F8VZ95 297 aa9.32□□□□□ -0.92
NFIA-213ENST00000493627 GOLGA8SH3BPF8 625 aa9.32□□□□□ -0.92
NFIA-213ENST00000493627 RNF103O00237 685 aa9.32□□□□□ -0.92
NFIA-213ENST00000493627 SLC31A1O15431 190 aa9.32□□□□□ -0.92
NFIA-213ENST00000493627 SMAD6O43541 496 aaKnown RBP9.32□□□□□ -0.92
NFIA-213ENST00000493627 PRNPP04156 253 aa9.32□□□□□ -0.92
NFIA-213ENST00000493627 JUPP14923 745 aa9.32□□□□□ -0.92
NFIA-213ENST00000493627 UCHL3P15374 230 aa9.32□□□□□ -0.92
NFIA-213ENST00000493627 GLDCP23378 1020 aa9.32□□□□□ -0.92
NFIA-213ENST00000493627 ERCC5P28715 1186 aaPredicted RBP9.32□□□□□ -0.92
NFIA-213ENST00000493627 OR1E1P30953 314 aa9.32□□□□□ -0.92
NFIA-213ENST00000493627 RECQLP46063 649 aaPredicted RBP9.32□□□□□ -0.92
NFIA-213ENST00000493627 SERPINH1P50454 418 aaKnown RBP9.32□□□□□ -0.92
NFIA-213ENST00000493627 NOMO3P69849 1222 aa9.32□□□□□ -0.92
NFIA-213ENST00000493627 CCDC15Q0P6D6 951 aa9.32□□□□□ -0.92
NFIA-213ENST00000493627 ILKQ13418 452 aa9.32□□□□□ -0.92
NFIA-213ENST00000493627 ZNF284Q2VY69 593 aa9.32□□□□□ -0.92
NFIA-213ENST00000493627 ACBD5Q5T8D3 534 aaPredicted RBP9.32□□□□□ -0.92
NFIA-213ENST00000493627 NAA35Q5VZE5 725 aa9.32□□□□□ -0.92
NFIA-213ENST00000493627 TRNP1Q6NT89 227 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms