RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 EIF4EBP2Q13542 120 aaPredicted RBP11.29□□□□□ -0.6
SND1-215ENST00000492772 ZNF284Q2VY69 593 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 CCDC40Q4G0X9 1142 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 ZCCHC8Q6NZY4 707 aaKnown RBP11.29□□□□□ -0.6
SND1-215ENST00000492772 FBXL22Q6P050 247 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 GCNT7Q6ZNI0 430 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 ABI3BPQ7Z7G0 1075 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 SLC22A18ASQ8N1D0 253 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 TMIEQ8NEW7 156 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 IFI44Q8TCB0 444 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 MAPK15Q8TD08 544 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 TTC9Q92623 222 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 ALG14Q96F25 216 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 CCDC97Q96F63 343 aaPredicted RBP11.29□□□□□ -0.6
SND1-215ENST00000492772 CEP63Q96MT8 703 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 GSDMAQ96QA5 445 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 THAP9Q9H5L6 903 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 CLMPQ9H6B4 373 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 FZD3Q9NPG1 666 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 DDIT4Q9NX09 232 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 HS3ST2Q9Y278 367 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 TDRD6O60522 2096 aaKnown RBP11.28□□□□□ -0.6
SND1-215ENST00000492772 LY6G6EA0A0G2JKS1 128 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 H3BM21 787 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 K7ESM1 405 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 PSMA7O14818 248 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 SMC2O95347 1197 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 PRNPP04156 253 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 CTSLP07711 333 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 GLI1P08151 1106 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 SRCP12931 536 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 KRT5P13647 590 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 RBMS1P29558 406 aaKnown RBP11.28□□□□□ -0.6
SND1-215ENST00000492772 CHRNA3P32297 505 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 PITX1P78337 314 aaPredicted RBP11.28□□□□□ -0.6
SND1-215ENST00000492772 KRT83P78385 493 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 STIM1Q13586 685 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 AUHQ13825 339 aaKnown RBP11.28□□□□□ -0.6
SND1-215ENST00000492772 LY6DQ14210 128 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 ISXQ2M1V0 245 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 C3orf38Q5JPI3 329 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 DENND1BQ6P3S1 775 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 KYAT3Q6YP21 454 aaKnown RBP11.28□□□□□ -0.6
SND1-215ENST00000492772 RRAGAQ7L523 313 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 PTAR1Q7Z6K3 402 aaPredicted RBP11.28□□□□□ -0.6
SND1-215ENST00000492772 TMEM110Q86TL2 294 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 ARHGEF19Q8IW93 802 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 ZNF548Q8NEK5 533 aaPredicted RBP11.28□□□□□ -0.6
SND1-215ENST00000492772 LMO3Q8TAP4 145 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 KLK6Q92876 244 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 MED8Q96G25 268 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 PPP1R16AQ96I34 528 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 C2orf49Q9BVC5 232 aaPredicted RBP11.28□□□□□ -0.6
SND1-215ENST00000492772 SRRTQ9BXP5 876 aaKnown RBP11.28□□□□□ -0.6
SND1-215ENST00000492772 SEMA4CQ9C0C4 833 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 MUC3BQ9H195 1237 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 GPR27Q9NS67 375 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 ASNSD1Q9NWL6 643 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 DNAJC28Q9NX36 388 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 SATB2Q9UPW6 733 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 CNTN6Q9UQ52 1028 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 TBC1D30Q9Y2I9 924 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 SSUH2Q9Y2M2 353 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 ATP6V1DQ9Y5K8 247 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 OR51B4Q9Y5P0 310 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 U3KQA8 63 aa11.28□□□□□ -0.6
SND1-215ENST00000492772 SYNJ2BP-COX16A0A087WUM0 186 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 HSF2BPO75031 334 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 PCDH8O95206 1070 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 NME1P15531 152 aaKnown RBP11.27□□□□□ -0.61
SND1-215ENST00000492772 MLLT3P42568 568 aaPredicted RBP11.27□□□□□ -0.61
SND1-215ENST00000492772 CLCN6P51797 869 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 CDH4P55283 916 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 CLDN2P57739 230 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 PDCLQ13371 301 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 TMEM259Q4ZIN3 620 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 KIAA1161Q6NSJ0 714 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 Q6ZSR6 202 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 ERN2Q76MJ5 926 aaKnown RBP11.27□□□□□ -0.61
SND1-215ENST00000492772 ZSCAN30Q86W11 494 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 PARGQ86W56 976 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 ATP11CQ8NB49 1132 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 OR52K2Q8NGK3 314 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 OR2A12Q8NGT7 310 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 TPCN2Q8NHX9 752 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 ARRDC3Q96B67 414 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 NOX5Q96PH1 765 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 SLC2A13Q96QE2 648 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 HDAC8Q9BY41 377 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 COX16Q9P0S2 106 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 VANGL2Q9ULK5 521 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 PCDHGA8Q9Y5G5 932 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 HS3ST3A1Q9Y663 406 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 CSNK1G3Q9Y6M4 447 aa11.27□□□□□ -0.61
SND1-215ENST00000492772 SPTY2D1-AS1A0A0U1RR47 76 aa11.26□□□□□ -0.61
SND1-215ENST00000492772 K7ENP7 123 aa11.26□□□□□ -0.61
SND1-215ENST00000492772 THAP12O43422 761 aa11.26□□□□□ -0.61
SND1-215ENST00000492772 SLC28A2O43868 658 aa11.26□□□□□ -0.61
SND1-215ENST00000492772 TCEA3O75764 348 aa11.26□□□□□ -0.61
SND1-215ENST00000492772 LETM1O95202 739 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms