RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 KRT10P13645 584 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 TGM2P21980 687 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 RBMS1P29558 406 aaKnown RBP14.32□□□□□ -0.12
VARS-227ENST00000489979 IRAK1P51617 712 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 YWHAZP63104 245 aaKnown RBP14.32□□□□□ -0.12
VARS-227ENST00000489979 ZNF177Q13360 481 aaPredicted RBP14.32□□□□□ -0.12
VARS-227ENST00000489979 PNOCQ13519 176 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 TAF5Q15542 800 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 ISXQ2M1V0 245 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 KIAA1614Q5VZ46 1190 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 Q6ZSR6 202 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 ABI3BPQ7Z7G0 1075 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 ARHGEF19Q8IW93 802 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 LMO3Q8TAP4 145 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 RNF34Q969K3 372 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 IFT43Q96FT9 208 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 MED8Q96G25 268 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 MED15Q96RN5 788 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 FAM204AQ9H8W3 233 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 USP29Q9HBJ7 922 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 METTL14Q9HCE5 456 aaKnown RBP14.32□□□□□ -0.12
VARS-227ENST00000489979 EVA1BQ9NVM1 165 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 COX16Q9P0S2 106 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 VPS28Q9UK41 221 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 VANGL2Q9ULK5 521 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 ZFR2Q9UPR6 939 aaKnown RBP14.32□□□□□ -0.12
VARS-227ENST00000489979 SSUH2Q9Y2M2 353 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 OR51B4Q9Y5P0 310 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 SPTA1P02549 2419 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 RP1P56715 2156 aa14.32□□□□□ -0.12
VARS-227ENST00000489979 A0A1W2PQ27 194 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 A0A1W2PQ64 194 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 RNF103O00237 685 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 PMM2O15305 246 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 SLC28A2O43868 658 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 LZTS3O60299 673 aaPredicted RBP14.31□□□□□ -0.12
VARS-227ENST00000489979 PCDH8O95206 1070 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 MT-CO1P00395 513 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 SLC2A3P11169 496 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 SRCP12931 536 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 CCR1P32246 355 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 CHRNA3P32297 505 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 CCDC15Q0P6D6 951 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 AUHQ13825 339 aaKnown RBP14.31□□□□□ -0.12
VARS-227ENST00000489979 CDKN3Q16667 212 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 COBLL1Q53SF7 1204 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 ZNF658Q5TYW1 1059 aaPredicted RBP14.31□□□□□ -0.12
VARS-227ENST00000489979 SEL1L3Q68CR1 1132 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 OR6B2Q6IFH4 312 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 IGF2-ASQ6U949 168 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 PTAR1Q7Z6K3 402 aaPredicted RBP14.31□□□□□ -0.12
VARS-227ENST00000489979 TMEM110Q86TL2 294 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 STK32AQ8WU08 396 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 ATXN7L3BQ96GX2 97 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 SLC46A1Q96NT5 459 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 MUC3BQ9H195 1237 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 THAP9Q9H5L6 903 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 DYRK4Q9NR20 520 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 RMND1Q9NWS8 449 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 DDIT4Q9NX09 232 aa14.31□□□□□ -0.12
VARS-227ENST00000489979 FARP1Q9Y4F1 1045 aaPredicted RBP14.31□□□□□ -0.12
VARS-227ENST00000489979 CPED1A4D0V7 1026 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 A6NNZ2 444 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 K7ENP7 123 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 ARHGAP6O43182 974 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 SNAP91O60641 907 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 WISP1O95388 367 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 KRT5P13647 590 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 GGCXP38435 758 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 HNRNPKP61978 463 aaKnown RBP eCLIP14.3□□□□□ -0.12
VARS-227ENST00000489979 SKOR1P84550 965 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 CDK17Q00537 523 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 GCNT1Q02742 428 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 LRRC63Q05C16 580 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 CETN1Q12798 172 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 INO80CQ6PI98 192 aaPredicted RBP14.3□□□□□ -0.12
VARS-227ENST00000489979 EFL1Q7Z2Z2 1120 aaKnown RBP14.3□□□□□ -0.12
VARS-227ENST00000489979 C14orf80Q86SX3 495 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 DEFB106AQ8N104 65 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 ATP11CQ8NB49 1132 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 CHST14Q8NCH0 376 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 ZNF548Q8NEK5 533 aaPredicted RBP14.3□□□□□ -0.12
VARS-227ENST00000489979 TMIEQ8NEW7 156 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 OR2A12Q8NGT7 310 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 CCDC34Q96HJ3 373 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 BMFQ96LC9 184 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 KREMEN1Q96MU8 473 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 HS3ST2Q9Y278 367 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 ENTPD2Q9Y5L3 495 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 HS3ST4Q9Y661 456 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 HS3ST3A1Q9Y663 406 aa14.3□□□□□ -0.12
VARS-227ENST00000489979 K7ERQ8 282 aa14.29□□□□□ -0.12
VARS-227ENST00000489979 CLDN11O75508 207 aa14.29□□□□□ -0.12
VARS-227ENST00000489979 PRNPP04156 253 aa14.29□□□□□ -0.12
VARS-227ENST00000489979 RRM1P23921 792 aa14.29□□□□□ -0.12
VARS-227ENST00000489979 FZD2Q14332 565 aa14.29□□□□□ -0.12
VARS-227ENST00000489979 CCDC40Q4G0X9 1142 aa14.29□□□□□ -0.12
VARS-227ENST00000489979 TMEM259Q4ZIN3 620 aa14.29□□□□□ -0.12
VARS-227ENST00000489979 ARSIQ5FYB1 569 aa14.29□□□□□ -0.12
VARS-227ENST00000489979 ZCCHC8Q6NZY4 707 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms