RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 ZWILCHQ9H900 591 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 SGK2Q9HBY8 427 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 FBXL12Q9NXK8 326 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 VPS13AQ96RL7 3174 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 ZSCAN5CA6NGD5 496 aaPredicted RBP17.72■□□□□ 0.43
MDC1-206ENST00000489540 SMAD6O43541 496 aaKnown RBP17.72■□□□□ 0.43
MDC1-206ENST00000489540 PROSCO94903 275 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 IL1BP01584 269 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 HOXD12P35452 270 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 RECQLP46063 649 aaPredicted RBP17.72■□□□□ 0.43
MDC1-206ENST00000489540 NDST2P52849 883 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 ARF5P84085 180 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 LMNB2Q03252 620 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 DPYSL2Q16555 572 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 KCNT1Q5JUK3 1230 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 DAB2IPQ5VWQ8 1189 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 Q6ZVU0 165 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 ARMCX6Q7L4S7 300 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 FAM124AQ86V42 546 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 SYT12Q8IV01 421 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 RHOT2Q8IXI1 618 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 DEFB119Q8N690 84 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 SLC35G2Q8TBE7 412 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 PIGKQ92643 395 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 OMDQ99983 421 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 GPR174Q9BXC1 333 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 NOL6Q9H6R4 1146 aaKnown RBP17.72■□□□□ 0.43
MDC1-206ENST00000489540 PPM1HQ9ULR3 514 aa17.72■□□□□ 0.43
MDC1-206ENST00000489540 GVINP1Q7Z2Y8 2422 aa17.71■□□□□ 0.43
MDC1-206ENST00000489540 PRR5-ARHGAP8B1AHC4 643 aa17.71■□□□□ 0.43
MDC1-206ENST00000489540 RASA4BC9J798 803 aa17.71■□□□□ 0.43
MDC1-206ENST00000489540 H3BRJ5 948 aa17.71■□□□□ 0.43
MDC1-206ENST00000489540 MID1O15344 667 aa17.71■□□□□ 0.43
MDC1-206ENST00000489540 RASA4O43374 803 aa17.71■□□□□ 0.43
MDC1-206ENST00000489540 RARAP10276 462 aa17.71■□□□□ 0.43
MDC1-206ENST00000489540 GOT1P17174 413 aa17.71■□□□□ 0.43
MDC1-206ENST00000489540 ERCC2P18074 760 aa17.71■□□□□ 0.43
MDC1-206ENST00000489540 ARL4AP40617 200 aa17.71■□□□□ 0.43
MDC1-206ENST00000489540 SSR1P43307 286 aaKnown RBP17.71■□□□□ 0.43
MDC1-206ENST00000489540 ARHGAP8P85298 464 aa17.71■□□□□ 0.43
MDC1-206ENST00000489540 WDR45BQ5MNZ6 344 aa17.71■□□□□ 0.43
MDC1-206ENST00000489540 C22orf39Q6P5X5 142 aa17.71■□□□□ 0.43
MDC1-206ENST00000489540 PRR23CQ6ZRP0 262 aa17.71■□□□□ 0.43
MDC1-206ENST00000489540 ZNF354CQ86Y25 554 aa17.71■□□□□ 0.43
MDC1-206ENST00000489540 PLPP6Q8IY26 295 aa17.71■□□□□ 0.43
MDC1-206ENST00000489540 PCDH20Q8N6Y1 951 aaKnown RBP17.71■□□□□ 0.43
MDC1-206ENST00000489540 OR2A12Q8NGT7 310 aa17.71■□□□□ 0.43
MDC1-206ENST00000489540 HSPH1Q92598 858 aa17.71■□□□□ 0.43
MDC1-206ENST00000489540 ISG20Q96AZ6 181 aaKnown RBP17.71■□□□□ 0.43
MDC1-206ENST00000489540 CWC15Q9P013 229 aaKnown RBP17.71■□□□□ 0.43
MDC1-206ENST00000489540 FZD4Q9ULV1 537 aa17.71■□□□□ 0.43
MDC1-206ENST00000489540 SDK1Q7Z5N4 2213 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 USP34Q70CQ2 3546 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 MUC22E2RYF6 1773 aaPredicted RBP17.7■□□□□ 0.42
MDC1-206ENST00000489540 METTL12A8MUP2 240 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 C1QTNF3-AMACRE9PGA6 284 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 BUB1O43683 1085 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 BNIP3LO60238 219 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 RNASEH2AO75792 299 aaKnown RBP17.7■□□□□ 0.42
MDC1-206ENST00000489540 TCF4P15884 667 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 ITPKAP23677 461 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 CDC25BP30305 580 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 MAN1A1P33908 653 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 CYLC1P35663 651 aaPredicted RBP17.7■□□□□ 0.42
MDC1-206ENST00000489540 ARHGAP25P42331 645 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 PSMD8P48556 350 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 SLC25A11Q02978 314 aaKnown RBP17.7■□□□□ 0.42
MDC1-206ENST00000489540 SERINC3Q13530 473 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 SMTNL2Q2TAL5 461 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 RABEPKQ7Z6M1 372 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 TMTC1Q8IUR5 882 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 SLC41A1Q8IVJ1 513 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 LZTR1Q8N653 840 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 C12orf50Q8NA57 414 aaPredicted RBP17.7■□□□□ 0.42
MDC1-206ENST00000489540 TMIEQ8NEW7 156 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 CEP76Q8TAP6 659 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 CASKIN2Q8WXE0 1202 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 HMCESQ96FZ2 354 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 HSPA12BQ96MM6 686 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 NEUROG2Q9H2A3 272 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 OSGEPQ9NPF4 335 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.7■□□□□ 0.42
MDC1-206ENST00000489540 PILRBQ9UKJ0 227 aa17.7■□□□□ 0.42
MDC1-206ENST00000489540 CKAP5Q14008 2032 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 A0A1W2PP55 124 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 KHNYNO15037 678 aaKnown RBP17.69■□□□□ 0.42
MDC1-206ENST00000489540 MTA2O94776 668 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 LCA5LO95447 670 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 SEMA4FO95754 770 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 CD160O95971 181 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 PRNPP04156 253 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 CHRNA3P32297 505 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 ACSL1P33121 698 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 MAGEA1P43355 309 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 CCDC15Q0P6D6 951 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 DPYSQ14117 519 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 TCEAL1Q15170 157 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 SPA17Q15506 151 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 CCDC6Q16204 474 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 INO80DQ53TQ3 878 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms