RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 KRT35Q92764 455 aa16.07■□□□□ 0.16
C9orf3-219ENST00000488186 MRGPRX3Q96LB0 322 aa16.07■□□□□ 0.16
C9orf3-219ENST00000488186 CCDC114Q96M63 670 aa16.07■□□□□ 0.16
C9orf3-219ENST00000488186 SEMA4AQ9H3S1 761 aa16.07■□□□□ 0.16
C9orf3-219ENST00000488186 NOL6Q9H6R4 1146 aaKnown RBP16.07■□□□□ 0.16
C9orf3-219ENST00000488186 LRRC19Q9H756 370 aa16.07■□□□□ 0.16
C9orf3-219ENST00000488186 SP110Q9HB58 689 aa16.07■□□□□ 0.16
C9orf3-219ENST00000488186 C2orf42Q9NWW7 574 aa16.07■□□□□ 0.16
C9orf3-219ENST00000488186 CAPN6Q9Y6Q1 641 aa16.07■□□□□ 0.16
C9orf3-219ENST00000488186 TARSL2A2RTX5 802 aaKnown RBP16.06■□□□□ 0.16
C9orf3-219ENST00000488186 ZNF487B1APH4 448 aa16.06■□□□□ 0.16
C9orf3-219ENST00000488186 PROB1E7EW31 1015 aa16.06■□□□□ 0.16
C9orf3-219ENST00000488186 MT-CO1P00395 513 aa16.06■□□□□ 0.16
C9orf3-219ENST00000488186 TDGF1P13385 188 aa16.06■□□□□ 0.16
C9orf3-219ENST00000488186 MSNP26038 577 aaKnown RBP16.06■□□□□ 0.16
C9orf3-219ENST00000488186 VASPP50552 380 aaPredicted RBP16.06■□□□□ 0.16
C9orf3-219ENST00000488186 CLCN6P51797 869 aa16.06■□□□□ 0.16
C9orf3-219ENST00000488186 COPS2P61201 443 aa16.06■□□□□ 0.16
C9orf3-219ENST00000488186 DYNLT1P63172 113 aa16.06■□□□□ 0.16
C9orf3-219ENST00000488186 ENPP2Q13822 863 aa16.06■□□□□ 0.16
C9orf3-219ENST00000488186 HNRNPA1L2Q32P51 320 aaKnown RBP16.06■□□□□ 0.16
C9orf3-219ENST00000488186 TFDP3Q5H9I0 405 aa16.06■□□□□ 0.16
C9orf3-219ENST00000488186 ANO7Q6IWH7 933 aa16.06■□□□□ 0.16
C9orf3-219ENST00000488186 LEKR1Q6ZMV7 388 aa16.06■□□□□ 0.16
C9orf3-219ENST00000488186 SPOCD1Q6ZMY3 1216 aa16.06■□□□□ 0.16
C9orf3-219ENST00000488186 METTL3Q86U44 580 aaKnown RBP16.06■□□□□ 0.16
C9orf3-219ENST00000488186 ATPAF2Q8N5M1 289 aa16.06■□□□□ 0.16
C9orf3-219ENST00000488186 NETO2Q8NC67 525 aa16.06■□□□□ 0.16
C9orf3-219ENST00000488186 FAF2Q96CS3 445 aa16.06■□□□□ 0.16
C9orf3-219ENST00000488186 PACSIN2Q9UNF0 486 aaPredicted RBP16.06■□□□□ 0.16
C9orf3-219ENST00000488186 HS3ST2Q9Y278 367 aa16.06■□□□□ 0.16
C9orf3-219ENST00000488186 MFHAS1Q9Y4C4 1052 aa16.06■□□□□ 0.16
C9orf3-219ENST00000488186 CXorf51AA0A1B0GTR3 108 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 A0A1W2PQF6 199 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 GOLGA6L9A6NEM1 432 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 C3orf70A6NLC5 250 aaPredicted RBP16.05■□□□□ 0.16
C9orf3-219ENST00000488186 ATP9BO43861 1147 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 ZMPSTE24O75844 475 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 SP9P0CG40 484 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 ACADMP11310 421 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 SRCP12931 536 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 MX2P20592 715 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 NBL1P41271 181 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 CDKN2BP42772 138 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 MARCKSL1P49006 195 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 PXNP49023 591 aaPredicted RBP16.05■□□□□ 0.16
C9orf3-219ENST00000488186 SERPINH1P50454 418 aaKnown RBP16.05■□□□□ 0.16
C9orf3-219ENST00000488186 ARF5P84085 180 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 PAFAH1B3Q15102 231 aaKnown RBP16.05■□□□□ 0.16
C9orf3-219ENST00000488186 LLGL1Q15334 1064 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 RPS6KA1Q15418 735 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 AFMIDQ63HM1 303 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 NCBP2-AS2Q69YL0 99 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 KIAA1211LQ6NV74 962 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 ZC3H14Q6PJT7 736 aaKnown RBP16.05■□□□□ 0.16
C9orf3-219ENST00000488186 BZW1Q7L1Q6 419 aaKnown RBP16.05■□□□□ 0.16
C9orf3-219ENST00000488186 LRRC49Q8IUZ0 686 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 ARHGAP12Q8IWW6 846 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 NPWQ8N729 165 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 ZBTB44Q8NCP5 570 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 OR2T3Q8NH03 318 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 CASKIN2Q8WXE0 1202 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 KLC2Q9H0B6 622 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 FBRSQ9HAH7 460 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 PRSS16Q9NQE7 514 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 UBA2Q9UBT2 640 aaPredicted RBP16.05■□□□□ 0.16
C9orf3-219ENST00000488186 IPO11Q9UI26 975 aaKnown RBP16.05■□□□□ 0.16
C9orf3-219ENST00000488186 PCDHGA2Q9Y5H1 932 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 HEY1Q9Y5J3 304 aa16.05■□□□□ 0.16
C9orf3-219ENST00000488186 H0Y858 1186 aa16.04■□□□□ 0.16
C9orf3-219ENST00000488186 J3KR12 359 aa16.04■□□□□ 0.16
C9orf3-219ENST00000488186 K7ERQ8 282 aa16.04■□□□□ 0.16
C9orf3-219ENST00000488186 KIF5CO60282 957 aa16.04■□□□□ 0.16
C9orf3-219ENST00000488186 CST8O60676 142 aa16.04■□□□□ 0.16
C9orf3-219ENST00000488186 PRAMEF11O60813 436 aa16.04■□□□□ 0.16
C9orf3-219ENST00000488186 SIN3BO75182 1162 aa16.04■□□□□ 0.16
C9orf3-219ENST00000488186 NEBLO76041 1014 aa16.04■□□□□ 0.16
C9orf3-219ENST00000488186 KRT10P13645 584 aa16.04■□□□□ 0.16
C9orf3-219ENST00000488186 PEX5P50542 639 aa16.04■□□□□ 0.16
C9orf3-219ENST00000488186 NHLH1Q02575 133 aa16.04■□□□□ 0.16
C9orf3-219ENST00000488186 IL10RBQ08334 325 aa16.04■□□□□ 0.16
C9orf3-219ENST00000488186 CAMK2GQ13555 558 aaPredicted RBP16.04■□□□□ 0.16
C9orf3-219ENST00000488186 INO80DQ53TQ3 878 aaPredicted RBP16.04■□□□□ 0.16
C9orf3-219ENST00000488186 KIAA1324Q6UXG2 1013 aaKnown RBP16.04■□□□□ 0.16
C9orf3-219ENST00000488186 DSG4Q86SJ6 1040 aa16.04■□□□□ 0.16
C9orf3-219ENST00000488186 TMPRSS6Q8IU80 811 aa16.04■□□□□ 0.16
C9orf3-219ENST00000488186 BBS5Q8N3I7 341 aa16.04■□□□□ 0.16
C9orf3-219ENST00000488186 RYBPQ8N488 228 aaPredicted RBP16.04■□□□□ 0.16
C9orf3-219ENST00000488186 PQLC3Q8N755 202 aa16.04■□□□□ 0.16
C9orf3-219ENST00000488186 CCNYQ8ND76 341 aa16.04■□□□□ 0.16
C9orf3-219ENST00000488186 OR8D1Q8WZ84 308 aa16.04■□□□□ 0.16
C9orf3-219ENST00000488186 PRCCQ92733 491 aaPredicted RBP16.04■□□□□ 0.16
C9orf3-219ENST00000488186 MYO19Q96H55 970 aa16.04■□□□□ 0.16
C9orf3-219ENST00000488186 HEMGNQ9BXL5 484 aa16.04■□□□□ 0.16
C9orf3-219ENST00000488186 CEP44Q9C0F1 390 aa16.04■□□□□ 0.16
C9orf3-219ENST00000488186 MTG2Q9H4K7 406 aa16.04■□□□□ 0.16
C9orf3-219ENST00000488186 ZSCAN32Q9NX65 697 aa16.04■□□□□ 0.16
C9orf3-219ENST00000488186 FCF1Q9Y324 198 aaKnown RBP16.04■□□□□ 0.16
C9orf3-219ENST00000488186 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.04■□□□□ 0.16
C9orf3-219ENST00000488186 K7ESF4 209 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms