RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 IFT27Q9BW83 186 aa4.29□□□□□ -1.72
CCDC66-221ENST00000487739 C1QTNF4Q9BXJ3 329 aa4.29□□□□□ -1.72
CCDC66-221ENST00000487739 ERVV-2B6SEH9 535 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 GRM8O00222 908 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 KCNJ13O60928 360 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 HEXIM1O94992 359 aaKnown RBP4.28□□□□□ -1.72
CCDC66-221ENST00000487739 SOX30O94993 753 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 NAGAP17050 411 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 TYK2P29597 1187 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 TECP42680 631 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 CDK7P50613 346 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 CLCNKBP51801 687 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 CDH12P55289 794 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 EEF1A2Q05639 463 aaKnown RBP4.28□□□□□ -1.72
CCDC66-221ENST00000487739 BTKQ06187 659 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 CDK18Q07002 472 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 ALKBH1Q13686 389 aaKnown RBP4.28□□□□□ -1.72
CCDC66-221ENST00000487739 PKP1Q13835 747 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 GXYLT1Q4G148 440 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 RINLQ6ZS11 566 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 SLC2A12Q8TD20 617 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 STYXQ8WUJ0 223 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 TMEM41AQ96HV5 264 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 SGCZQ96LD1 299 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 DUX5Q96PT3 197 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 GFM1Q96RP9 751 aaKnown RBP4.28□□□□□ -1.72
CCDC66-221ENST00000487739 RTKNQ9BST9 563 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 TRIM31Q9BZY9 425 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 RETREG1Q9H6L5 497 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 CDH22Q9UJ99 828 aa4.28□□□□□ -1.72
CCDC66-221ENST00000487739 LOC102724159A0A0B4J2E5 919 aa4.27□□□□□ -1.73
CCDC66-221ENST00000487739 C17orf102A2RUQ5 167 aa4.27□□□□□ -1.73
CCDC66-221ENST00000487739 GOLGA6L3A6NEY3 463 aa4.27□□□□□ -1.73
CCDC66-221ENST00000487739 SRRM3A6NNA2 597 aaPredicted RBP4.27□□□□□ -1.73
CCDC66-221ENST00000487739 RNMTO43148 476 aaKnown RBP4.27□□□□□ -1.73
CCDC66-221ENST00000487739 DDNO94850 711 aaPredicted RBP4.27□□□□□ -1.73
CCDC66-221ENST00000487739 MMP3P08254 477 aa4.27□□□□□ -1.73
CCDC66-221ENST00000487739 ENO3P13929 434 aaPredicted RBP4.27□□□□□ -1.73
CCDC66-221ENST00000487739 ZNF12P17014 697 aa4.27□□□□□ -1.73
CCDC66-221ENST00000487739 ITGB8P26012 769 aa4.27□□□□□ -1.73
CCDC66-221ENST00000487739 GNALP38405 381 aa4.27□□□□□ -1.73
CCDC66-221ENST00000487739 SPARCL1Q14515 664 aa4.27□□□□□ -1.73
CCDC66-221ENST00000487739 PWP2Q15269 919 aaKnown RBP4.27□□□□□ -1.73
CCDC66-221ENST00000487739 KIF19Q2TAC6 998 aa4.27□□□□□ -1.73
CCDC66-221ENST00000487739 ZNF718Q3SXZ3 478 aa4.27□□□□□ -1.73
CCDC66-221ENST00000487739 FAM76BQ5HYJ3 339 aa4.27□□□□□ -1.73
CCDC66-221ENST00000487739 MTFR2Q6P444 385 aa4.27□□□□□ -1.73
CCDC66-221ENST00000487739 NFRKBQ6P4R8 1299 aa4.27□□□□□ -1.73
CCDC66-221ENST00000487739 ZDHHC23Q8IYP9 409 aa4.27□□□□□ -1.73
CCDC66-221ENST00000487739 VPS52Q8N1B4 723 aa4.27□□□□□ -1.73
CCDC66-221ENST00000487739 HDAC7Q8WUI4 952 aa4.27□□□□□ -1.73
CCDC66-221ENST00000487739 FAR1Q8WVX9 515 aa4.27□□□□□ -1.73
CCDC66-221ENST00000487739 CCDC136Q96JN2 1154 aa4.27□□□□□ -1.73
CCDC66-221ENST00000487739 PIGSQ96S52 555 aa4.27□□□□□ -1.73
CCDC66-221ENST00000487739 FIZ1Q96SL8 496 aa4.27□□□□□ -1.73
CCDC66-221ENST00000487739 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.27□□□□□ -1.73
CCDC66-221ENST00000487739 BRD8Q9H0E9 1235 aa4.27□□□□□ -1.73
CCDC66-221ENST00000487739 DDX31Q9H8H2 851 aaKnown RBP4.27□□□□□ -1.73
CCDC66-221ENST00000487739 FNIP2Q9P278 1114 aa4.27□□□□□ -1.73
CCDC66-221ENST00000487739 SEL1LQ9UBV2 794 aa4.27□□□□□ -1.73
CCDC66-221ENST00000487739 CCNT1O60563 726 aaKnown RBP4.26□□□□□ -1.73
CCDC66-221ENST00000487739 GAS8-AS1O95177 125 aa4.26□□□□□ -1.73
CCDC66-221ENST00000487739 TNFRSF6BO95407 300 aa4.26□□□□□ -1.73
CCDC66-221ENST00000487739 ITGA2BP08514 1039 aa4.26□□□□□ -1.73
CCDC66-221ENST00000487739 FCGR2AP12318 317 aa4.26□□□□□ -1.73
CCDC66-221ENST00000487739 THPOP40225 353 aa4.26□□□□□ -1.73
CCDC66-221ENST00000487739 PTK2BQ14289 1009 aa4.26□□□□□ -1.73
CCDC66-221ENST00000487739 SLC39A14Q15043 492 aa4.26□□□□□ -1.73
CCDC66-221ENST00000487739 ZNF672Q499Z4 452 aaPredicted RBP4.26□□□□□ -1.73
CCDC66-221ENST00000487739 EFHC1Q5JVL4 640 aa4.26□□□□□ -1.73
CCDC66-221ENST00000487739 WBP2NLQ6ICG8 309 aa4.26□□□□□ -1.73
CCDC66-221ENST00000487739 MON1BQ7L1V2 547 aa4.26□□□□□ -1.73
CCDC66-221ENST00000487739 RAB11FIP2Q7L804 512 aa4.26□□□□□ -1.73
CCDC66-221ENST00000487739 RNF144BQ7Z419 303 aa4.26□□□□□ -1.73
CCDC66-221ENST00000487739 SRLQ86TD4 932 aa4.26□□□□□ -1.73
CCDC66-221ENST00000487739 TCP11L2Q8N4U5 519 aa4.26□□□□□ -1.73
CCDC66-221ENST00000487739 MIGA1Q8NAN2 632 aa4.26□□□□□ -1.73
CCDC66-221ENST00000487739 CPT1BQ92523 772 aa4.26□□□□□ -1.73
CCDC66-221ENST00000487739 KCNJ9Q92806 393 aa4.26□□□□□ -1.73
CCDC66-221ENST00000487739 CADM1Q9BY67 442 aaKnown RBP4.26□□□□□ -1.73
CCDC66-221ENST00000487739 ARFGAP3Q9NP61 516 aa4.26□□□□□ -1.73
CCDC66-221ENST00000487739 SLC22A11Q9NSA0 550 aa4.26□□□□□ -1.73
CCDC66-221ENST00000487739 ERRFI1Q9UJM3 462 aaPredicted RBP4.26□□□□□ -1.73
CCDC66-221ENST00000487739 IGHV4-28A0A0C4DH34 117 aa4.25□□□□□ -1.73
CCDC66-221ENST00000487739 LINC01553A4QN01 128 aa4.25□□□□□ -1.73
CCDC66-221ENST00000487739 NPIPB13A6NJU9 1138 aa4.25□□□□□ -1.73
CCDC66-221ENST00000487739 NPIPB5A8MRT5 1133 aa4.25□□□□□ -1.73
CCDC66-221ENST00000487739 NPIPB4C9JG80 1138 aa4.25□□□□□ -1.73
CCDC66-221ENST00000487739 EYA2O00167 538 aa4.25□□□□□ -1.73
CCDC66-221ENST00000487739 HSPB6O14558 160 aa4.25□□□□□ -1.73
CCDC66-221ENST00000487739 PPM1GO15355 546 aaPredicted RBP4.25□□□□□ -1.73
CCDC66-221ENST00000487739 HNRNPRO43390 633 aaKnown RBP4.25□□□□□ -1.73
CCDC66-221ENST00000487739 ITM2AO43736 263 aa4.25□□□□□ -1.73
CCDC66-221ENST00000487739 CAND2O75155 1236 aa4.25□□□□□ -1.73
CCDC66-221ENST00000487739 SERPINI2O75830 405 aa4.25□□□□□ -1.73
CCDC66-221ENST00000487739 PLGP00747 810 aaPredicted RBP4.25□□□□□ -1.73
CCDC66-221ENST00000487739 SNRNP70P08621 437 aaKnown RBP4.25□□□□□ -1.73
CCDC66-221ENST00000487739 DAOP14920 347 aa4.25□□□□□ -1.73
CCDC66-221ENST00000487739 TUBA1BP68363 451 aa4.25□□□□□ -1.73
CCDC66-221ENST00000487739 MST1RQ04912 1400 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms