RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 HERPUD2Q9BSE4 406 aa4.49□□□□□ -1.69
LINC00888-204ENST00000487386 ISCA1Q9BUE6 129 aa4.49□□□□□ -1.69
LINC00888-204ENST00000487386 ACAD9Q9H845 621 aa4.49□□□□□ -1.69
LINC00888-204ENST00000487386 ITM2CQ9NQX7 267 aa4.49□□□□□ -1.69
LINC00888-204ENST00000487386 CD207Q9UJ71 328 aa4.49□□□□□ -1.69
LINC00888-204ENST00000487386 ICKQ9UPZ9 632 aa4.49□□□□□ -1.69
LINC00888-204ENST00000487386 MORC2Q9Y6X9 1032 aaPredicted RBP4.49□□□□□ -1.69
LINC00888-204ENST00000487386 MYO15BQ96JP2 1530 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 FAM90A8PA6NJQ4 464 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 TNFRSF13BO14836 293 aaPredicted RBP4.48□□□□□ -1.69
LINC00888-204ENST00000487386 SMAD6O43541 496 aaKnown RBP4.48□□□□□ -1.69
LINC00888-204ENST00000487386 TMCC1O94876 653 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 FAM90A13PP0C7W8 464 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 FAM90A24PP0C7X0 464 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 TNNT1P13805 278 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 GJC1P36383 396 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 HALP42357 657 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 MTNR1AP48039 350 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 RFX2P48378 723 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 HTR6P50406 440 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 SELENOVP59797 346 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 ADCK5Q3MIX3 580 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 TBC1D9BQ66K14 1250 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 TMEM71Q6P5X7 295 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 LVRNQ6Q4G3 990 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 CTU1Q7Z7A3 348 aaKnown RBP4.48□□□□□ -1.69
LINC00888-204ENST00000487386 TRIM74Q86UV6 250 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 TRIM73Q86UV7 250 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 TMEM57Q8N5G2 664 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 DPP10Q8N608 796 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 SCAIQ8N9R8 606 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 C7orf57Q8NEG2 295 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 GABPB2Q8TAK5 448 aaPredicted RBP4.48□□□□□ -1.69
LINC00888-204ENST00000487386 BICD2Q8TD16 824 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 LYZL4Q96KX0 146 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 MARK4Q96L34 752 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 TEFMQ96QE5 360 aaKnown RBP4.48□□□□□ -1.69
LINC00888-204ENST00000487386 TLR8Q9NR97 1041 aaKnown RBP4.48□□□□□ -1.69
LINC00888-204ENST00000487386 HDAC6Q9UBN7 1215 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 DNAJC16Q9Y2G8 782 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 RAI2Q9Y5P3 530 aa4.48□□□□□ -1.69
LINC00888-204ENST00000487386 RPS10-NUDT3A0A1W2PQS6 291 aa4.47□□□□□ -1.69
LINC00888-204ENST00000487386 STX16-NPEPL1H3BU86 382 aa4.47□□□□□ -1.69
LINC00888-204ENST00000487386 STX16O14662 325 aa4.47□□□□□ -1.69
LINC00888-204ENST00000487386 IRAK2O43187 625 aa4.47□□□□□ -1.69
LINC00888-204ENST00000487386 DHX16O60231 1041 aaKnown RBP4.47□□□□□ -1.69
LINC00888-204ENST00000487386 CNPP09543 421 aaKnown RBP4.47□□□□□ -1.69
LINC00888-204ENST00000487386 ARSBP15848 533 aa4.47□□□□□ -1.69
LINC00888-204ENST00000487386 CHRNB2P17787 502 aa4.47□□□□□ -1.69
LINC00888-204ENST00000487386 ARHGAP8P85298 464 aa4.47□□□□□ -1.69
LINC00888-204ENST00000487386 TRAF1Q13077 416 aa4.47□□□□□ -1.69
LINC00888-204ENST00000487386 BYSLQ13895 437 aaKnown RBP4.47□□□□□ -1.69
LINC00888-204ENST00000487386 CTXN3Q4LDR2 81 aa4.47□□□□□ -1.69
LINC00888-204ENST00000487386 SYTL3Q4VX76 610 aa4.47□□□□□ -1.69
LINC00888-204ENST00000487386 RUNDC3AQ59EK9 446 aa4.47□□□□□ -1.69
LINC00888-204ENST00000487386 FBXO47Q5MNV8 452 aa4.47□□□□□ -1.69
LINC00888-204ENST00000487386 TMEM268Q5VZI3 342 aa4.47□□□□□ -1.69
LINC00888-204ENST00000487386 DENND1BQ6P3S1 775 aa4.47□□□□□ -1.69
LINC00888-204ENST00000487386 LDHAL6AQ6ZMR3 332 aa4.47□□□□□ -1.69
LINC00888-204ENST00000487386 CAMK1DQ8IU85 385 aa4.47□□□□□ -1.69
LINC00888-204ENST00000487386 ZDHHC23Q8IYP9 409 aa4.47□□□□□ -1.69
LINC00888-204ENST00000487386 LRRC57Q8N9N7 239 aa4.47□□□□□ -1.69
LINC00888-204ENST00000487386 NAF1Q96HR8 494 aaKnown RBP4.47□□□□□ -1.69
LINC00888-204ENST00000487386 RBM38Q9H0Z9 239 aaKnown RBP4.47□□□□□ -1.69
LINC00888-204ENST00000487386 KLHL31Q9H511 634 aa4.47□□□□□ -1.69
LINC00888-204ENST00000487386 PLAC1Q9HBJ0 212 aa4.47□□□□□ -1.69
LINC00888-204ENST00000487386 PLEKHB1Q9UF11 243 aaPredicted RBP4.47□□□□□ -1.69
LINC00888-204ENST00000487386 GPR52Q9Y2T5 361 aa4.47□□□□□ -1.69
LINC00888-204ENST00000487386 PCDHGB3Q9Y5G1 929 aa4.47□□□□□ -1.69
LINC00888-204ENST00000487386 STMND1H3BQB6 276 aa4.46□□□□□ -1.7
LINC00888-204ENST00000487386 HSPB6O14558 160 aa4.46□□□□□ -1.7
LINC00888-204ENST00000487386 RNMTO43148 476 aaKnown RBP4.46□□□□□ -1.7
LINC00888-204ENST00000487386 LCATP04180 440 aa4.46□□□□□ -1.7
LINC00888-204ENST00000487386 MYZAPP0CAP1 466 aa4.46□□□□□ -1.7
LINC00888-204ENST00000487386 CCKARP32238 428 aa4.46□□□□□ -1.7
LINC00888-204ENST00000487386 RFX5P48382 616 aaPredicted RBP4.46□□□□□ -1.7
LINC00888-204ENST00000487386 DCAF12L2Q5VW00 463 aa4.46□□□□□ -1.7
LINC00888-204ENST00000487386 WDR5BQ86VZ2 330 aa4.46□□□□□ -1.7
LINC00888-204ENST00000487386 SETD9Q8NE22 299 aa4.46□□□□□ -1.7
LINC00888-204ENST00000487386 NCSTNQ92542 709 aa4.46□□□□□ -1.7
LINC00888-204ENST00000487386 RBM17Q96I25 401 aaKnown RBP4.46□□□□□ -1.7
LINC00888-204ENST00000487386 ZNF333Q96JL9 665 aa4.46□□□□□ -1.7
LINC00888-204ENST00000487386 IFT27Q9BW83 186 aa4.46□□□□□ -1.7
LINC00888-204ENST00000487386 CTDSP1Q9GZU7 261 aa4.46□□□□□ -1.7
LINC00888-204ENST00000487386 MRPL44Q9H9J2 332 aaKnown RBP4.46□□□□□ -1.7
LINC00888-204ENST00000487386 KRCC1Q9NPI7 259 aaPredicted RBP4.46□□□□□ -1.7
LINC00888-204ENST00000487386 GRHL1Q9NZI5 618 aa4.46□□□□□ -1.7
LINC00888-204ENST00000487386 FBXO40Q9UH90 709 aa4.46□□□□□ -1.7
LINC00888-204ENST00000487386 CDH22Q9UJ99 828 aa4.46□□□□□ -1.7
LINC00888-204ENST00000487386 PCDHA7Q9UN72 937 aa4.46□□□□□ -1.7
LINC00888-204ENST00000487386 TARSL2A2RTX5 802 aaKnown RBP4.45□□□□□ -1.7
LINC00888-204ENST00000487386 C17orf102A2RUQ5 167 aa4.45□□□□□ -1.7
LINC00888-204ENST00000487386 BECN2A8MW95 431 aa4.45□□□□□ -1.7
LINC00888-204ENST00000487386 I6L893 689 aaPredicted RBP4.45□□□□□ -1.7
LINC00888-204ENST00000487386 RXRAP19793 462 aa4.45□□□□□ -1.7
LINC00888-204ENST00000487386 CLCNKBP51801 687 aa4.45□□□□□ -1.7
LINC00888-204ENST00000487386 ZP1P60852 638 aa4.45□□□□□ -1.7
LINC00888-204ENST00000487386 ROR2Q01974 943 aaKnown RBP4.45□□□□□ -1.7
LINC00888-204ENST00000487386 IL13RA2Q14627 380 aa4.45□□□□□ -1.7
LINC00888-204ENST00000487386 RPE65Q16518 533 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms