RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 STAP1Q9ULZ2 295 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 SLC8A2Q9UPR5 921 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 INVSQ9Y283 1065 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 STON1Q9Y6Q2 735 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 RP1P56715 2156 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 ZNF106Q9H2Y7 1883 aaKnown RBP5.88□□□□□ -1.47
CUX1-208ENST00000485792 AKAP13Q12802 2813 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 LAMA5O15230 3695 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 SYNJ2BP-COX16A0A087WUM0 186 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 A0A087X0T9 212 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 WASH4PA8MWX3 477 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 GOLGA8SH3BPF8 625 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 TM4SF5O14894 197 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 PRMT3O60678 531 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 TBL1XO60907 577 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 CLDN11O75508 207 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 GJB3O75712 270 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 ZMPSTE24O75844 475 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 EPN2O95208 641 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 SERPINC1P01008 464 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 APOEP02649 317 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 ASLP04424 464 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 RETP07949 1114 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 SRPRAP08240 638 aaKnown RBP5.88□□□□□ -1.47
CUX1-208ENST00000485792 FAM228BP0C875 321 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 KRT3P12035 628 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 PDGFRAP16234 1089 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 RHOQP17081 205 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 ABCB4P21439 1286 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 IL1R2P27930 398 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 RDXP35241 583 aaKnown RBP5.88□□□□□ -1.47
CUX1-208ENST00000485792 NSFP46459 744 aaKnown RBP5.88□□□□□ -1.47
CUX1-208ENST00000485792 AIF1P55008 147 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 CDH4P55283 916 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 PSMA6P60900 246 aaKnown RBP5.88□□□□□ -1.47
CUX1-208ENST00000485792 BNC1Q01954 994 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 ARID5AQ03989 594 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 IHHQ14623 411 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 ACAP1Q15027 740 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 TCEAL1Q15170 157 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 TEAD4Q15561 434 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 SFMBT2Q5VUG0 894 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 PMS2CLQ68D20 193 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 MBLAC2Q68D91 279 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 SPECC1LQ69YQ0 1117 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 ZNF783Q6ZMS7 281 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 CACNA2D4Q7Z3S7 1137 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 SETD3Q86TU7 594 aaPredicted RBP5.88□□□□□ -1.47
CUX1-208ENST00000485792 KBTBD6Q86V97 674 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 FAM131BQ86XD5 332 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 CACUL1Q86Y37 369 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 TMEM139Q8IV31 216 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 SLC41A1Q8IVJ1 513 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 LGI2Q8N0V4 545 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 NPWQ8N729 165 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 NIPA2Q8N8Q9 360 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 MSANTD4Q8NCY6 345 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 C1orf216Q8TAB5 229 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 FAM71BQ8TC56 605 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 ZDHHC1Q8WTX9 485 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 RXFP2Q8WXD0 754 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 RUBCNQ92622 972 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 PTPRN2Q92932 1015 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 BTBD6Q96KE9 485 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 MRGPRX1Q96LB2 322 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 FAM129BQ96TA1 746 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 CNPY3Q9BT09 278 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 ACE2Q9BYF1 805 aaPredicted RBP5.88□□□□□ -1.47
CUX1-208ENST00000485792 TKTL2Q9H0I9 626 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 FBRSQ9HAH7 460 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 ITM2CQ9NQX7 267 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 ABCB8Q9NUT2 735 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 GPATCH2LQ9NWQ4 482 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 COX16Q9P0S2 106 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 KIAA1522Q9P206 1035 aaPredicted RBP5.88□□□□□ -1.47
CUX1-208ENST00000485792 SLC12A6Q9UHW9 1150 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 SMG5Q9UPR3 1016 aaKnown RBP5.88□□□□□ -1.47
CUX1-208ENST00000485792 HS3ST2Q9Y278 367 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 REXO2Q9Y3B8 237 aaKnown RBP5.88□□□□□ -1.47
CUX1-208ENST00000485792 PAXBP1Q9Y5B6 917 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 PCDHGA5Q9Y5G8 931 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 ATXN2Q99700 1313 aaKnown RBP5.88□□□□□ -1.47
CUX1-208ENST00000485792 NCOR2Q9Y618 2525 aa5.88□□□□□ -1.47
CUX1-208ENST00000485792 IGHV1OR15-9A0A0B4J2B8 117 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 A0A0D9SEW6 157 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 SSU72P8A0A1W2PR75 194 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 ILVBLA1L0T0 632 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 BCLAF3A2AJT9 711 aaKnown RBP5.87□□□□□ -1.47
CUX1-208ENST00000485792 TARSL2A2RTX5 802 aaKnown RBP5.87□□□□□ -1.47
CUX1-208ENST00000485792 PATE3B3GLJ2 98 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 EIF3CLB5ME19 914 aaKnown RBP5.87□□□□□ -1.47
CUX1-208ENST00000485792 E9PAM4 449 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 F5H5T6 163 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 K7ERQ8 282 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 PLK4O00444 970 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 SNAP91O60641 907 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 RPP40O75818 363 aaKnown RBP5.87□□□□□ -1.47
CUX1-208ENST00000485792 LCA5LO95447 670 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 MT-CO1P00395 513 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 FTLP02792 175 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms