RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	TBC1D3L	B9A6J9	549 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	WNT9A	O14904	365 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	DFNA5	O60443	496 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	PAGE1	O75459	146 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	WNT1	P04628	370 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	C1S	P09871	688 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	TBC1D3H	P0C7X1	549 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	SLC2A3	P11169	496 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	GOT1	P17174	413 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	TFE3	P19532	575 aa	Predicted RBP	10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	ACTN2	P35609	894 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	RACK1	P63244	317 aa	Known RBP	10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	KCNMA1	Q12791	1236 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	SFSWAP	Q12872	951 aa	Known RBP	10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	ZNF177	Q13360	481 aa	Predicted RBP	10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	RAPGEF1	Q13905	1077 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	KCNJ12	Q14500	433 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	ARID5B	Q14865	1188 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	SHB	Q15464	509 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	MAN2A1	Q16706	1144 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	TBC1D25	Q3MII6	688 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	DPCR1	Q3MIW9	517 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	VWA3B	Q502W6	1294 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	C2CD6	Q53TS8	623 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	TBC1D3G	Q6DHY5	549 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	TBC1D3C	Q6IPX1	549 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	CXorf57	Q6NSI4	855 aa	Known RBP	10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	OLFML1	Q6UWY5	402 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	SND1	Q7KZF4	910 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	LURAP1L	Q8IV03	231 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	TBC1D3	Q8IZP1	549 aa	Predicted RBP	10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	OR2T34	Q8NGX1	318 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	ELF4	Q99607	663 aa	Predicted RBP	10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	TUBGCP2	Q9BSJ2	902 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	ACE2	Q9BYF1	805 aa	Predicted RBP	10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	CLSTN2	Q9H4D0	955 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	ASNSD1	Q9NWL6	643 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	CHMP5	Q9NZZ3	219 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	SARDH	Q9UL12	918 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	AHCTF1	Q8WYP5	2266 aa		10.87	□□□□□ -0.67
HMGN1-215	ENST00000485550	ITIH6	Q6UXX5	1313 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550		B8ZZF3	427 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	VILL	O15195	856 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	RTN2	O75298	545 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	DAB1	O75553	588 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	CNTN5	O94779	1100 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	ADCY5	O95622	1261 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	ADH1B	P00325	375 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	CDK4	P11802	303 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	ZNF18	P17022	549 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	C5AR1	P21730	350 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	GLDC	P23378	1020 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	MAT2A	P31153	395 aa	Known RBP	10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	NOS2	P35228	1153 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	SULT1E1	P49888	294 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	PLK1	P53350	603 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	RHD	Q02161	417 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	SULT2A1	Q06520	285 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	BNIP3	Q12983	259 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	SLC12A1	Q13621	1099 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	DRAP1	Q14919	205 aa	Predicted RBP	10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	DLG2	Q15700	870 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	MIIP	Q5JXC2	388 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	OTUD1	Q5VV17	481 aa	Predicted RBP	10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	KDM7A	Q6ZMT4	941 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	FAM114A1	Q8IWE2	563 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	FAM71A	Q8IYT1	594 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	SAP25	Q8TEE9	199 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	FRS2	Q8WU20	508 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	ALG14	Q96F25	216 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	FEM1A	Q9BSK4	669 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	TKTL2	Q9H0I9	626 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	ANLN	Q9NQW6	1124 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	TMPRSS4	Q9NRS4	437 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	SAMSN1	Q9NSI8	373 aa	Known RBP	10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	PIGV	Q9NUD9	493 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	ADAMTS1	Q9UHI8	967 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	VPS28	Q9UK41	221 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	FZD4	Q9ULV1	537 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	CLCA2	Q9UQC9	943 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	VPS9D1	Q9Y2B5	631 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	FHOD1	Q9Y613	1164 aa		10.86	□□□□□ -0.67
HMGN1-215	ENST00000485550	RP1	P56715	2156 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550		I6L893	689 aa	Predicted RBP	10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	SLC28A2	O43868	658 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	MT-CO1	P00395	513 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	CYP11B1	P15538	503 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	CD38	P28907	300 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	DRD3	P35462	400 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	ADPRH	P54922	357 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	SNX16	P57768	344 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	BPIFB4	P59827	614 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	PPP2CB	P62714	309 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	PPP2CA	P67775	309 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	ELAVL3	Q14576	367 aa	Known RBP	10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	KLHDC7A	Q5VTJ3	777 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	TTC39B	Q5VTQ0	682 aa	Predicted RBP	10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	BROX	Q5VW32	411 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	DPY19L2P1	Q6NXN4	242 aa		10.85	□□□□□ -0.67

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