RNA–Protein interactions for RNA: ENST00000484266.5

CHKB-210, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 1,401 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-210ENST00000484266 LRRD1A4D1F6 860 aa33.59■■■□□ 2.97
CHKB-210ENST00000484266 GRID2IPA4D2P6 1211 aa33.59■■■□□ 2.97
CHKB-210ENST00000484266 SMAD6O43541 496 aaKnown RBP33.59■■■□□ 2.97
CHKB-210ENST00000484266 SERPINH1P50454 418 aaKnown RBP33.59■■■□□ 2.97
CHKB-210ENST00000484266 CLCN6P51797 869 aa33.59■■■□□ 2.97
CHKB-210ENST00000484266 SLC20A2Q08357 652 aa33.59■■■□□ 2.97
CHKB-210ENST00000484266 TMPRSS6Q8IU80 811 aa33.59■■■□□ 2.97
CHKB-210ENST00000484266 LRRC57Q8N9N7 239 aa33.59■■■□□ 2.97
CHKB-210ENST00000484266 PCDH19Q8TAB3 1148 aa33.59■■■□□ 2.97
CHKB-210ENST00000484266 FBRSQ9HAH7 460 aa33.59■■■□□ 2.97
CHKB-210ENST00000484266 DDX56Q9NY93 547 aaKnown RBP33.59■■■□□ 2.97
CHKB-210ENST00000484266 PLXND1Q9Y4D7 1925 aa33.58■■■□□ 2.97
CHKB-210ENST00000484266 C3orf70A6NLC5 250 aaPredicted RBP33.58■■■□□ 2.97
CHKB-210ENST00000484266 KRT1P04264 644 aa33.58■■■□□ 2.97
CHKB-210ENST00000484266 CCDC175P0C221 793 aa33.58■■■□□ 2.97
CHKB-210ENST00000484266 IFI16Q16666 785 aaKnown RBP33.58■■■□□ 2.97
CHKB-210ENST00000484266 TSGA10Q9BZW7 698 aa33.58■■■□□ 2.97
CHKB-210ENST00000484266 PRDM16Q9HAZ2 1276 aa33.58■■■□□ 2.97
CHKB-210ENST00000484266 ARHGAP42A6NI28 874 aa33.57■■■□□ 2.96
CHKB-210ENST00000484266 PAPOLAP51003 745 aaKnown RBP33.57■■■□□ 2.96
CHKB-210ENST00000484266 NHLH1Q02575 133 aa33.57■■■□□ 2.96
CHKB-210ENST00000484266 SRSF5Q13243 272 aaKnown RBP33.57■■■□□ 2.96
CHKB-210ENST00000484266 TP53INP2Q8IXH6 220 aa33.57■■■□□ 2.96
CHKB-210ENST00000484266 KIAA1524Q8TCG1 905 aa33.57■■■□□ 2.96
CHKB-210ENST00000484266 ZSCAN5CA6NGD5 496 aaPredicted RBP33.56■■■□□ 2.96
CHKB-210ENST00000484266 HRO43593 1189 aa33.56■■■□□ 2.96
CHKB-210ENST00000484266 C7P10643 843 aa33.56■■■□□ 2.96
CHKB-210ENST00000484266 NBL1P41271 181 aa33.56■■■□□ 2.96
CHKB-210ENST00000484266 MARCKSL1P49006 195 aa33.56■■■□□ 2.96
CHKB-210ENST00000484266 GEMIN4P57678 1058 aaKnown RBP33.56■■■□□ 2.96
CHKB-210ENST00000484266 C22orf39Q6P5X5 142 aa33.56■■■□□ 2.96
CHKB-210ENST00000484266 LEKR1Q6ZMV7 388 aa33.56■■■□□ 2.96
CHKB-210ENST00000484266 Q6ZVU0 165 aa33.56■■■□□ 2.96
CHKB-210ENST00000484266 VSIG1Q86XK7 387 aa33.56■■■□□ 2.96
CHKB-210ENST00000484266 RSPH9Q9H1X1 276 aaPredicted RBP33.56■■■□□ 2.96
CHKB-210ENST00000484266 ZNF487B1APH4 448 aa33.55■■■□□ 2.96
CHKB-210ENST00000484266 CNR2P34972 360 aa33.55■■■□□ 2.96
CHKB-210ENST00000484266 NCBP2-AS2Q69YL0 99 aa33.55■■■□□ 2.96
CHKB-210ENST00000484266 KIAA1324Q6UXG2 1013 aaKnown RBP33.55■■■□□ 2.96
CHKB-210ENST00000484266 CACUL1Q86Y37 369 aa33.55■■■□□ 2.96
CHKB-210ENST00000484266 PQLC3Q8N755 202 aa33.55■■■□□ 2.96
CHKB-210ENST00000484266 KRT35Q92764 455 aa33.55■■■□□ 2.96
CHKB-210ENST00000484266 DFFAO00273 331 aa33.54■■■□□ 2.96
CHKB-210ENST00000484266 KRT86O43790 486 aa33.54■■■□□ 2.96
CHKB-210ENST00000484266 ZNF821O75541 412 aaPredicted RBP33.54■■■□□ 2.96
CHKB-210ENST00000484266 PTMAP06454 111 aaKnown RBP33.54■■■□□ 2.96
CHKB-210ENST00000484266 SERPINB6P35237 376 aa33.54■■■□□ 2.96
CHKB-210ENST00000484266 STK40Q8N2I9 435 aa33.54■■■□□ 2.96
CHKB-210ENST00000484266 RNF10Q8N5U6 811 aaKnown RBP33.54■■■□□ 2.96
CHKB-210ENST00000484266 GAB3Q8WWW8 586 aa33.54■■■□□ 2.96
CHKB-210ENST00000484266 PRCCQ92733 491 aaPredicted RBP33.54■■■□□ 2.96
CHKB-210ENST00000484266 RNF25Q96BH1 459 aaPredicted RBP33.54■■■□□ 2.96
CHKB-210ENST00000484266 SIPA1Q96FS4 1042 aa33.54■■■□□ 2.96
CHKB-210ENST00000484266 RNF157Q96PX1 679 aa33.54■■■□□ 2.96
CHKB-210ENST00000484266 FAM129BQ96TA1 746 aa33.54■■■□□ 2.96
CHKB-210ENST00000484266 CEP44Q9C0F1 390 aa33.54■■■□□ 2.96
CHKB-210ENST00000484266 KCNF1Q9H3M0 494 aa33.54■■■□□ 2.96
CHKB-210ENST00000484266 PDFQ9HBH1 243 aa33.54■■■□□ 2.96
CHKB-210ENST00000484266 FCF1Q9Y324 198 aaKnown RBP33.54■■■□□ 2.96
CHKB-210ENST00000484266 CAPN6Q9Y6Q1 641 aa33.54■■■□□ 2.96
CHKB-210ENST00000484266 VPS13AQ96RL7 3174 aa33.54■■■□□ 2.96
CHKB-210ENST00000484266 PALMO75781 387 aa33.53■■■□□ 2.96
CHKB-210ENST00000484266 RPS14P62263 151 aaKnown RBP33.53■■■□□ 2.96
CHKB-210ENST00000484266 ELAVL3Q14576 367 aaKnown RBP33.53■■■□□ 2.96
CHKB-210ENST00000484266 PAFAH1B3Q15102 231 aaKnown RBP33.53■■■□□ 2.96
CHKB-210ENST00000484266 USP39Q53GS9 565 aaKnown RBP33.53■■■□□ 2.96
CHKB-210ENST00000484266 ARHGAP36Q6ZRI8 547 aa33.53■■■□□ 2.96
CHKB-210ENST00000484266 ZNF662Q6ZS27 426 aa33.53■■■□□ 2.96
CHKB-210ENST00000484266 KATNAL2Q8IYT4 538 aa33.53■■■□□ 2.96
CHKB-210ENST00000484266 RLN3Q8WXF3 142 aa33.53■■■□□ 2.96
CHKB-210ENST00000484266 CD93Q9NPY3 652 aa33.53■■■□□ 2.96
CHKB-210ENST00000484266 J3KR12 359 aa33.53■■■□□ 2.96
CHKB-210ENST00000484266 MFSD11O43934 449 aa33.53■■■□□ 2.96
CHKB-210ENST00000484266 PRAMEF11O60813 436 aa33.53■■■□□ 2.96
CHKB-210ENST00000484266 RPP40O75818 363 aaKnown RBP33.53■■■□□ 2.96
CHKB-210ENST00000484266 CTNNA1P35221 906 aaKnown RBP33.53■■■□□ 2.96
CHKB-210ENST00000484266 P2RY2P41231 377 aa33.53■■■□□ 2.96
CHKB-210ENST00000484266 MAP7D1Q3KQU3 841 aa33.53■■■□□ 2.96
CHKB-210ENST00000484266 ODF2Q5BJF6 829 aa33.53■■■□□ 2.96
CHKB-210ENST00000484266 ZNF776Q68DI1 518 aaPredicted RBP33.53■■■□□ 2.96
CHKB-210ENST00000484266 METTL3Q86U44 580 aaKnown RBP33.53■■■□□ 2.96
CHKB-210ENST00000484266 TNKS2Q9H2K2 1166 aa33.53■■■□□ 2.96
CHKB-210ENST00000484266 GUCA1BQ9UMX6 200 aa33.53■■■□□ 2.96
CHKB-210ENST00000484266 INVSQ9Y283 1065 aa33.53■■■□□ 2.96
CHKB-210ENST00000484266 SBDSQ9Y3A5 250 aaKnown RBP eCLIP33.53■■■□□ 2.96
CHKB-210ENST00000484266 MFSD7Q6UXD7 560 aa33.52■■■□□ 2.96
CHKB-210ENST00000484266 NT5DC3Q86UY8 548 aa33.52■■■□□ 2.96
CHKB-210ENST00000484266 SYCE1Q8N0S2 351 aa33.52■■■□□ 2.96
CHKB-210ENST00000484266 PCDH20Q8N6Y1 951 aaKnown RBP33.52■■■□□ 2.96
CHKB-210ENST00000484266 OR2A12Q8NGT7 310 aa33.52■■■□□ 2.96
CHKB-210ENST00000484266 BNIP3LO60238 219 aa33.51■■■□□ 2.95
CHKB-210ENST00000484266 INO80DQ53TQ3 878 aaPredicted RBP33.51■■■□□ 2.95
CHKB-210ENST00000484266 FRMD1Q8N878 549 aa33.51■■■□□ 2.95
CHKB-210ENST00000484266 CASKIN2Q8WXE0 1202 aa33.51■■■□□ 2.95
CHKB-210ENST00000484266 ISG20Q96AZ6 181 aaKnown RBP33.51■■■□□ 2.95
CHKB-210ENST00000484266 ZNF830Q96NB3 372 aaPredicted RBP33.51■■■□□ 2.95
CHKB-210ENST00000484266 USP36Q9P275 1121 aaKnown RBP33.51■■■□□ 2.95
CHKB-210ENST00000484266 PPP2R2CQ9Y2T4 447 aa33.51■■■□□ 2.95
CHKB-210ENST00000484266 PCDHA3Q9Y5H8 950 aa33.51■■■□□ 2.95
CHKB-210ENST00000484266 SHROOM3Q8TF72 1996 aa33.5■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms