RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 FTSJ1Q9UET6 329 aa18.47■□□□□ 0.55
ATG4B-221ENST00000483778 HS3ST2Q9Y278 367 aa18.47■□□□□ 0.55
ATG4B-221ENST00000483778 GPSM3Q9Y4H4 160 aa18.47■□□□□ 0.55
ATG4B-221ENST00000483778 ACTL7AQ9Y615 435 aa18.47■□□□□ 0.55
ATG4B-221ENST00000483778 PES1O00541 588 aaKnown RBP18.46■□□□□ 0.55
ATG4B-221ENST00000483778 ZNF821O75541 412 aaPredicted RBP18.46■□□□□ 0.55
ATG4B-221ENST00000483778 ENDOD1O94919 500 aa18.46■□□□□ 0.55
ATG4B-221ENST00000483778 ITGAVP06756 1048 aa18.46■□□□□ 0.55
ATG4B-221ENST00000483778 RHOCP08134 193 aa18.46■□□□□ 0.55
ATG4B-221ENST00000483778 CHRNB2P17787 502 aa18.46■□□□□ 0.55
ATG4B-221ENST00000483778 SNX16P57768 344 aa18.46■□□□□ 0.55
ATG4B-221ENST00000483778 CYP4F3Q08477 520 aa18.46■□□□□ 0.55
ATG4B-221ENST00000483778 SMAD1Q15797 465 aaKnown RBP18.46■□□□□ 0.55
ATG4B-221ENST00000483778 TCP11X2Q5H9J9 407 aa18.46■□□□□ 0.55
ATG4B-221ENST00000483778 PIP5KL1Q5T9C9 394 aa18.46■□□□□ 0.55
ATG4B-221ENST00000483778 NAA35Q5VZE5 725 aa18.46■□□□□ 0.55
ATG4B-221ENST00000483778 NAPEPLDQ6IQ20 393 aa18.46■□□□□ 0.55
ATG4B-221ENST00000483778 PRPF39Q86UA1 669 aaKnown RBP18.46■□□□□ 0.55
ATG4B-221ENST00000483778 ZDHHC17Q8IUH5 632 aa18.46■□□□□ 0.55
ATG4B-221ENST00000483778 MFSD2AQ8NA29 543 aa18.46■□□□□ 0.55
ATG4B-221ENST00000483778 ATP11CQ8NB49 1132 aa18.46■□□□□ 0.55
ATG4B-221ENST00000483778 TNKS2Q9H2K2 1166 aa18.46■□□□□ 0.55
ATG4B-221ENST00000483778 GDF3Q9NR23 364 aa18.46■□□□□ 0.55
ATG4B-221ENST00000483778 RRN3Q9NYV6 651 aa18.46■□□□□ 0.55
ATG4B-221ENST00000483778 RAXQ9Y2V3 346 aa18.46■□□□□ 0.55
ATG4B-221ENST00000483778 ATRXP46100 2492 aa18.45■□□□□ 0.54
ATG4B-221ENST00000483778 IGLV3-10A0A075B6K4 115 aa18.45■□□□□ 0.54
ATG4B-221ENST00000483778 E9PAM4 449 aa18.45■□□□□ 0.54
ATG4B-221ENST00000483778 ENC1O14682 589 aa18.45■□□□□ 0.54
ATG4B-221ENST00000483778 EPHB6O15197 1021 aa18.45■□□□□ 0.54
ATG4B-221ENST00000483778 SRGAP2O75044 1071 aa18.45■□□□□ 0.54
ATG4B-221ENST00000483778 GJB6O95452 261 aa18.45■□□□□ 0.54
ATG4B-221ENST00000483778 LDOC1O95751 146 aaPredicted RBP18.45■□□□□ 0.54
ATG4B-221ENST00000483778 PRLRP16471 622 aa18.45■□□□□ 0.54
ATG4B-221ENST00000483778 CHRNA3P32297 505 aa18.45■□□□□ 0.54
ATG4B-221ENST00000483778 NOMO3P69849 1222 aa18.45■□□□□ 0.54
ATG4B-221ENST00000483778 FAM46CQ5VWP2 391 aa18.45■□□□□ 0.54
ATG4B-221ENST00000483778 SMYD5Q6GMV2 418 aa18.45■□□□□ 0.54
ATG4B-221ENST00000483778 DSG4Q86SJ6 1040 aa18.45■□□□□ 0.54
ATG4B-221ENST00000483778 EMC1Q8N766 993 aa18.45■□□□□ 0.54
ATG4B-221ENST00000483778 EPS8L1Q8TE68 723 aa18.45■□□□□ 0.54
ATG4B-221ENST00000483778 CNDP2Q96KP4 475 aaKnown RBP18.45■□□□□ 0.54
ATG4B-221ENST00000483778 C1orf74Q96LT6 269 aa18.45■□□□□ 0.54
ATG4B-221ENST00000483778 PPP1R9BQ96SB3 815 aa18.45■□□□□ 0.54
ATG4B-221ENST00000483778 MYOCQ99972 504 aa18.45■□□□□ 0.54
ATG4B-221ENST00000483778 STK33Q9BYT3 514 aa18.45■□□□□ 0.54
ATG4B-221ENST00000483778 VPS16Q9H269 839 aa18.45■□□□□ 0.54
ATG4B-221ENST00000483778 GANQ9H2C0 597 aa18.45■□□□□ 0.54
ATG4B-221ENST00000483778 KDM4CQ9H3R0 1056 aa18.45■□□□□ 0.54
ATG4B-221ENST00000483778 NOCTQ9UK39 431 aaKnown RBP18.45■□□□□ 0.54
ATG4B-221ENST00000483778 IGSF10Q6WRI0 2623 aa18.44■□□□□ 0.54
ATG4B-221ENST00000483778 F8VZ95 297 aa18.44■□□□□ 0.54
ATG4B-221ENST00000483778 ALOX15BO15296 676 aa18.44■□□□□ 0.54
ATG4B-221ENST00000483778 SLC31A1O15431 190 aa18.44■□□□□ 0.54
ATG4B-221ENST00000483778 SLC7A4O43246 635 aa18.44■□□□□ 0.54
ATG4B-221ENST00000483778 RNGTTO60942 597 aaKnown RBP18.44■□□□□ 0.54
ATG4B-221ENST00000483778 ZMPSTE24O75844 475 aa18.44■□□□□ 0.54
ATG4B-221ENST00000483778 F9P00740 461 aa18.44■□□□□ 0.54
ATG4B-221ENST00000483778 EPHA8P29322 1005 aaPredicted RBP18.44■□□□□ 0.54
ATG4B-221ENST00000483778 RXRGP48443 463 aa18.44■□□□□ 0.54
ATG4B-221ENST00000483778 ARSIQ5FYB1 569 aa18.44■□□□□ 0.54
ATG4B-221ENST00000483778 TRIM69Q86WT6 500 aa18.44■□□□□ 0.54
ATG4B-221ENST00000483778 FAM131BQ86XD5 332 aa18.44■□□□□ 0.54
ATG4B-221ENST00000483778 TSC1Q92574 1164 aa18.44■□□□□ 0.54
ATG4B-221ENST00000483778 SKA1Q96BD8 255 aa18.44■□□□□ 0.54
ATG4B-221ENST00000483778 SPON2Q9BUD6 331 aa18.44■□□□□ 0.54
ATG4B-221ENST00000483778 NUP62CLQ9H1M0 184 aa18.44■□□□□ 0.54
ATG4B-221ENST00000483778 FZD3Q9NPG1 666 aa18.44■□□□□ 0.54
ATG4B-221ENST00000483778 STAP1Q9ULZ2 295 aa18.44■□□□□ 0.54
ATG4B-221ENST00000483778 ZFR2Q9UPR6 939 aaKnown RBP18.44■□□□□ 0.54
ATG4B-221ENST00000483778 A0A1W2PQU0 124 aa18.43■□□□□ 0.54
ATG4B-221ENST00000483778 C1QTNF3-AMACRE9PGA6 284 aa18.43■□□□□ 0.54
ATG4B-221ENST00000483778 KPNA3O00505 521 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-221ENST00000483778 SDC3O75056 442 aa18.43■□□□□ 0.54
ATG4B-221ENST00000483778 GFPT2O94808 682 aa18.43■□□□□ 0.54
ATG4B-221ENST00000483778 OR1E1P30953 314 aa18.43■□□□□ 0.54
ATG4B-221ENST00000483778 SCNN1AP37088 669 aa18.43■□□□□ 0.54
ATG4B-221ENST00000483778 KRT83P78385 493 aa18.43■□□□□ 0.54
ATG4B-221ENST00000483778 ATP11AP98196 1134 aa18.43■□□□□ 0.54
ATG4B-221ENST00000483778 MTA1Q13330 715 aa18.43■□□□□ 0.54
ATG4B-221ENST00000483778 C15orf59Q2T9L4 293 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-221ENST00000483778 COL28A1Q2UY09 1125 aa18.43■□□□□ 0.54
ATG4B-221ENST00000483778 ZNF284Q2VY69 593 aa18.43■□□□□ 0.54
ATG4B-221ENST00000483778 SFMBT2Q5VUG0 894 aa18.43■□□□□ 0.54
ATG4B-221ENST00000483778 DPY19L3Q6ZPD9 716 aa18.43■□□□□ 0.54
ATG4B-221ENST00000483778 SETD3Q86TU7 594 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-221ENST00000483778 SLC30A5Q8TAD4 765 aa18.43■□□□□ 0.54
ATG4B-221ENST00000483778 HNRNPLLQ8WVV9 542 aaKnown RBP18.43■□□□□ 0.54
ATG4B-221ENST00000483778 ERVMER34-1Q9H9K5 563 aa18.43■□□□□ 0.54
ATG4B-221ENST00000483778 LMBRD1Q9NUN5 540 aa18.43■□□□□ 0.54
ATG4B-221ENST00000483778 NDFIP2Q9NV92 336 aa18.43■□□□□ 0.54
ATG4B-221ENST00000483778 BPTFQ12830 3046 aa18.43■□□□□ 0.54
ATG4B-221ENST00000483778 FAM72CH0Y354 149 aa18.42■□□□□ 0.54
ATG4B-221ENST00000483778 CD160O95971 181 aa18.42■□□□□ 0.54
ATG4B-221ENST00000483778 ACADVLP49748 655 aa18.42■□□□□ 0.54
ATG4B-221ENST00000483778 FMO1Q01740 532 aa18.42■□□□□ 0.54
ATG4B-221ENST00000483778 STAT4Q14765 748 aa18.42■□□□□ 0.54
ATG4B-221ENST00000483778 FAM72AQ5TYM5 149 aa18.42■□□□□ 0.54
ATG4B-221ENST00000483778 FAM72DQ6L9T8 149 aa18.42■□□□□ 0.54
ATG4B-221ENST00000483778 LRRC31Q6UY01 552 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms