RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 CDK17Q00537 523 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 CENPCQ03188 943 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 LRRC63Q05C16 580 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 VAC14Q08AM6 782 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 AUHQ13825 339 aaKnown RBP13.15□□□□□ -0.3
TMEM54-206ENST00000482771 TTC39BQ5VTQ0 682 aaPredicted RBP13.15□□□□□ -0.3
TMEM54-206ENST00000482771 Q6ZSR6 202 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 HORMAD1Q86X24 394 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 SH2D3CQ8N5H7 860 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 MAPK15Q8TD08 544 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 VCPIP1Q96JH7 1222 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 FAM204AQ9H8W3 233 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 DDIT4Q9NX09 232 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 DNAJC28Q9NX36 388 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 NLGN3Q9NZ94 848 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 VPS28Q9UK41 221 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 VANGL2Q9ULK5 521 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 LY6G6EA0A0G2JKS1 128 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 CPED1A4D0V7 1026 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 K7ERQ8 282 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 LETM1O95202 739 aaPredicted RBP13.14□□□□□ -0.31
TMEM54-206ENST00000482771 C6P13671 934 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 HNRNPA2B1P22626 353 aaKnown RBP13.14□□□□□ -0.31
TMEM54-206ENST00000482771 RBMS1P29558 406 aaKnown RBP13.14□□□□□ -0.31
TMEM54-206ENST00000482771 IRAK1P51617 712 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 KCNC4Q03721 635 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 ISXQ2M1V0 245 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 CCDC40Q4G0X9 1142 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 COBLL1Q53SF7 1204 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 C14orf80Q86SX3 495 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 DEFB106AQ8N104 65 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 FAM181AQ8N9Y4 354 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 ATP11CQ8NB49 1132 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 TMIEQ8NEW7 156 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 IFI44Q8TCB0 444 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 ZNF606Q8WXB4 792 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 TTC9Q92623 222 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 ARRDC3Q96B67 414 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 BMFQ96LC9 184 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 KREMEN1Q96MU8 473 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 GSDMAQ96QA5 445 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 DUSP23Q9BVJ7 150 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 SCAND2PQ9GZW5 306 aaPredicted RBP13.14□□□□□ -0.31
TMEM54-206ENST00000482771 SIK2Q9H0K1 926 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 MUC3BQ9H195 1237 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 ASCL3Q9NQ33 180 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 DYRK4Q9NR20 520 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 THSD1Q9NS62 852 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 ZFR2Q9UPR6 939 aaKnown RBP13.14□□□□□ -0.31
TMEM54-206ENST00000482771 HS3ST3A1Q9Y663 406 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 U3KQA8 63 aa13.14□□□□□ -0.31
TMEM54-206ENST00000482771 RNF103O00237 685 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 P4HA2O15460 535 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 MED7O43513 233 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 SMAD6O43541 496 aaKnown RBP13.13□□□□□ -0.31
TMEM54-206ENST00000482771 SNAP91O60641 907 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 CLDN11O75508 207 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 GRAP2O75791 330 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 PAK4O96013 591 aaPredicted RBP13.13□□□□□ -0.31
TMEM54-206ENST00000482771 SRCP12931 536 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 KRT10P13645 584 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 TGM2P21980 687 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 HNRNPKP61978 463 aaKnown RBP eCLIP13.13□□□□□ -0.31
TMEM54-206ENST00000482771 GCNT1Q02742 428 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 MAPK8IP2Q13387 824 aaPredicted RBP13.13□□□□□ -0.31
TMEM54-206ENST00000482771 CDKN3Q16667 212 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 ARSIQ5FYB1 569 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 SEL1L3Q68CR1 1132 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 ISM2Q6H9L7 571 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 OR6B2Q6IFH4 312 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 GCNT7Q6ZNI0 430 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 ABI3BPQ7Z7G0 1075 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 DCP2Q8IU60 420 aaKnown RBP13.13□□□□□ -0.31
TMEM54-206ENST00000482771 SLC22A18ASQ8N1D0 253 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 CHST14Q8NCH0 376 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 OR2A12Q8NGT7 310 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 IFT43Q96FT9 208 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 SLC46A1Q96NT5 459 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.13□□□□□ -0.31
TMEM54-206ENST00000482771 GTPBP4Q9BZE4 634 aaKnown RBP13.13□□□□□ -0.31
TMEM54-206ENST00000482771 USP29Q9HBJ7 922 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 GDPD2Q9HCC8 539 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 UBE2TQ9NPD8 197 aaPredicted RBP13.13□□□□□ -0.31
TMEM54-206ENST00000482771 ACP6Q9NPH0 428 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 EVA1BQ9NVM1 165 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 SATB2Q9UPW6 733 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 CNTN6Q9UQ52 1028 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 TBC1D30Q9Y2I9 924 aa13.13□□□□□ -0.31
TMEM54-206ENST00000482771 A0A1W2PNU3 283 aaPredicted RBP13.12□□□□□ -0.31
TMEM54-206ENST00000482771 POM121BA6NF01 834 aa13.12□□□□□ -0.31
TMEM54-206ENST00000482771 THAP12O43422 761 aa13.12□□□□□ -0.31
TMEM54-206ENST00000482771 PAGE1O75459 146 aa13.12□□□□□ -0.31
TMEM54-206ENST00000482771 CNTN5O94779 1100 aa13.12□□□□□ -0.31
TMEM54-206ENST00000482771 SMC2O95347 1197 aa13.12□□□□□ -0.31
TMEM54-206ENST00000482771 RRM1P23921 792 aa13.12□□□□□ -0.31
TMEM54-206ENST00000482771 GGCXP38435 758 aa13.12□□□□□ -0.31
TMEM54-206ENST00000482771 KRT83P78385 493 aa13.12□□□□□ -0.31
TMEM54-206ENST00000482771 NME3Q13232 169 aa13.12□□□□□ -0.31
TMEM54-206ENST00000482771 FZD2Q14332 565 aa13.12□□□□□ -0.31
TMEM54-206ENST00000482771 C3orf38Q5JPI3 329 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms