RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 KLHDC7AQ5VTJ3 777 aa19.3■□□□□ 0.68
ABCF3-214ENST00000480562 LINGO4Q6UY18 593 aa19.3■□□□□ 0.68
ABCF3-214ENST00000480562 ERICH1Q86X53 443 aa19.3■□□□□ 0.68
ABCF3-214ENST00000480562 OR2A12Q8NGT7 310 aa19.3■□□□□ 0.68
ABCF3-214ENST00000480562 HNRNPLLQ8WVV9 542 aaKnown RBP19.3■□□□□ 0.68
ABCF3-214ENST00000480562 KLK6Q92876 244 aa19.3■□□□□ 0.68
ABCF3-214ENST00000480562 C2orf49Q9BVC5 232 aaPredicted RBP19.3■□□□□ 0.68
ABCF3-214ENST00000480562 DMTF1Q9Y222 760 aa19.3■□□□□ 0.68
ABCF3-214ENST00000480562 KPNA3O00505 521 aaPredicted RBP19.29■□□□□ 0.68
ABCF3-214ENST00000480562 RNGTTO60942 597 aaKnown RBP19.29■□□□□ 0.68
ABCF3-214ENST00000480562 PRLRP16471 622 aa19.29■□□□□ 0.68
ABCF3-214ENST00000480562 GLDCP23378 1020 aa19.29■□□□□ 0.68
ABCF3-214ENST00000480562 CHRNA3P32297 505 aa19.29■□□□□ 0.68
ABCF3-214ENST00000480562 FLT3P36888 993 aa19.29■□□□□ 0.68
ABCF3-214ENST00000480562 RXRGP48443 463 aa19.29■□□□□ 0.68
ABCF3-214ENST00000480562 SLC25A52Q3SY17 297 aa19.29■□□□□ 0.68
ABCF3-214ENST00000480562 SETMARQ53H47 684 aaPredicted RBP19.29■□□□□ 0.68
ABCF3-214ENST00000480562 PIP5KL1Q5T9C9 394 aa19.29■□□□□ 0.68
ABCF3-214ENST00000480562 TRNP1Q6NT89 227 aa19.29■□□□□ 0.68
ABCF3-214ENST00000480562 LRRC31Q6UY01 552 aa19.29■□□□□ 0.68
ABCF3-214ENST00000480562 NOP9Q86U38 636 aaKnown RBP19.29■□□□□ 0.68
ABCF3-214ENST00000480562 OXR1Q8N573 874 aa19.29■□□□□ 0.68
ABCF3-214ENST00000480562 CHST14Q8NCH0 376 aa19.29■□□□□ 0.68
ABCF3-214ENST00000480562 OR7D4Q8NG98 312 aa19.29■□□□□ 0.68
ABCF3-214ENST00000480562 ARRDC3Q96B67 414 aa19.29■□□□□ 0.68
ABCF3-214ENST00000480562 PGAP3Q96FM1 320 aaPredicted RBP19.29■□□□□ 0.68
ABCF3-214ENST00000480562 MYOCQ99972 504 aa19.29■□□□□ 0.68
ABCF3-214ENST00000480562 NAA15Q9BXJ9 866 aaKnown RBP19.29■□□□□ 0.68
ABCF3-214ENST00000480562 DKK4Q9UBT3 224 aa19.29■□□□□ 0.68
ABCF3-214ENST00000480562 PCDHGA1Q9Y5H4 931 aa19.29■□□□□ 0.68
ABCF3-214ENST00000480562 E9PAM4 449 aa19.28■□□□□ 0.68
ABCF3-214ENST00000480562 PRAMEF26H0Y7S4 382 aa19.28■□□□□ 0.68
ABCF3-214ENST00000480562 SLC31A1O15431 190 aa19.28■□□□□ 0.68
ABCF3-214ENST00000480562 SRGAP2O75044 1071 aa19.28■□□□□ 0.68
ABCF3-214ENST00000480562 SDC3O75056 442 aa19.28■□□□□ 0.68
ABCF3-214ENST00000480562 RFPL3O75679 317 aa19.28■□□□□ 0.68
ABCF3-214ENST00000480562 F9P00740 461 aa19.28■□□□□ 0.68
ABCF3-214ENST00000480562 ERCC5P28715 1186 aaPredicted RBP19.28■□□□□ 0.68
ABCF3-214ENST00000480562 NUDT1P36639 197 aa19.28■□□□□ 0.68
ABCF3-214ENST00000480562 ACADVLP49748 655 aa19.28■□□□□ 0.68
ABCF3-214ENST00000480562 ARTNQ5T4W7 220 aa19.28■□□□□ 0.68
ABCF3-214ENST00000480562 SFMBT2Q5VUG0 894 aa19.28■□□□□ 0.68
ABCF3-214ENST00000480562 KANSL1Q7Z3B3 1105 aa19.28■□□□□ 0.68
ABCF3-214ENST00000480562 SETD3Q86TU7 594 aaPredicted RBP19.28■□□□□ 0.68
ABCF3-214ENST00000480562 TMPRSS12Q86WS5 348 aa19.28■□□□□ 0.68
ABCF3-214ENST00000480562 PDCD7Q8N8D1 485 aaKnown RBP19.28■□□□□ 0.68
ABCF3-214ENST00000480562 DCAF4L2Q8NA75 395 aa19.28■□□□□ 0.68
ABCF3-214ENST00000480562 CPA5Q8WXQ8 436 aa19.28■□□□□ 0.68
ABCF3-214ENST00000480562 TNKS2Q9H2K2 1166 aa19.28■□□□□ 0.68
ABCF3-214ENST00000480562 PREBQ9HCU5 417 aa19.28■□□□□ 0.68
ABCF3-214ENST00000480562 SAMSN1Q9NSI8 373 aaKnown RBP19.28■□□□□ 0.68
ABCF3-214ENST00000480562 FARP1Q9Y4F1 1045 aaPredicted RBP19.28■□□□□ 0.68
ABCF3-214ENST00000480562 PAXBP1Q9Y5B6 917 aa19.28■□□□□ 0.68
ABCF3-214ENST00000480562 KNTC1P50748 2209 aa19.28■□□□□ 0.68
ABCF3-214ENST00000480562 URB1O60287 2271 aaKnown RBP19.27■□□□□ 0.68
ABCF3-214ENST00000480562 IGLV3-10A0A075B6K4 115 aa19.27■□□□□ 0.68
ABCF3-214ENST00000480562 A0A1W2PQU0 124 aa19.27■□□□□ 0.68
ABCF3-214ENST00000480562 MAGEC1O60732 1142 aa19.27■□□□□ 0.68
ABCF3-214ENST00000480562 ENDOD1O94919 500 aa19.27■□□□□ 0.68
ABCF3-214ENST00000480562 MMEP08473 750 aa19.27■□□□□ 0.68
ABCF3-214ENST00000480562 JUPP14923 745 aa19.27■□□□□ 0.68
ABCF3-214ENST00000480562 UCHL3P15374 230 aa19.27■□□□□ 0.68
ABCF3-214ENST00000480562 OR1E1P30953 314 aa19.27■□□□□ 0.68
ABCF3-214ENST00000480562 SCNN1AP37088 669 aa19.27■□□□□ 0.68
ABCF3-214ENST00000480562 COL9A2Q14055 689 aaPredicted RBP19.27■□□□□ 0.68
ABCF3-214ENST00000480562 ARSIQ5FYB1 569 aa19.27■□□□□ 0.68
ABCF3-214ENST00000480562 C6orf118Q5T5N4 469 aa19.27■□□□□ 0.68
ABCF3-214ENST00000480562 PDZD3Q86UT5 571 aa19.27■□□□□ 0.68
ABCF3-214ENST00000480562 IQCHQ86VS3 1027 aa19.27■□□□□ 0.68
ABCF3-214ENST00000480562 GRIN3AQ8TCU5 1115 aa19.27■□□□□ 0.68
ABCF3-214ENST00000480562 TSC1Q92574 1164 aa19.27■□□□□ 0.68
ABCF3-214ENST00000480562 KLHDC7BQ96G42 594 aa19.27■□□□□ 0.68
ABCF3-214ENST00000480562 C1orf74Q96LT6 269 aa19.27■□□□□ 0.68
ABCF3-214ENST00000480562 CCDC114Q96M63 670 aa19.27■□□□□ 0.68
ABCF3-214ENST00000480562 CFAP57Q96MR6 1250 aa19.27■□□□□ 0.68
ABCF3-214ENST00000480562 SPON2Q9BUD6 331 aa19.27■□□□□ 0.68
ABCF3-214ENST00000480562 CHMP5Q9NZZ3 219 aa19.27■□□□□ 0.68
ABCF3-214ENST00000480562 DACH1Q9UI36 760 aa19.27■□□□□ 0.68
ABCF3-214ENST00000480562 LSM8O95777 96 aaKnown RBP19.26■□□□□ 0.67
ABCF3-214ENST00000480562 C1SP09871 688 aa19.26■□□□□ 0.67
ABCF3-214ENST00000480562 OVGP1Q12889 678 aa19.26■□□□□ 0.67
ABCF3-214ENST00000480562 NAA35Q5VZE5 725 aa19.26■□□□□ 0.67
ABCF3-214ENST00000480562 C22orf39Q6P5X5 142 aa19.26■□□□□ 0.67
ABCF3-214ENST00000480562 FAM131BQ86XD5 332 aa19.26■□□□□ 0.67
ABCF3-214ENST00000480562 TMEM145Q8NBT3 493 aa19.26■□□□□ 0.67
ABCF3-214ENST00000480562 TMIEQ8NEW7 156 aa19.26■□□□□ 0.67
ABCF3-214ENST00000480562 CAAP1Q9H8G2 361 aa19.26■□□□□ 0.67
ABCF3-214ENST00000480562 FZD3Q9NPG1 666 aa19.26■□□□□ 0.67
ABCF3-214ENST00000480562 DYRK4Q9NR20 520 aa19.26■□□□□ 0.67
ABCF3-214ENST00000480562 TAB2Q9NYJ8 693 aa19.26■□□□□ 0.67
ABCF3-214ENST00000480562 TMEM59LQ9UK28 342 aa19.26■□□□□ 0.67
ABCF3-214ENST00000480562 ARID1BQ8NFD5 2236 aaPredicted RBP19.25■□□□□ 0.67
ABCF3-214ENST00000480562 F8VZ95 297 aa19.25■□□□□ 0.67
ABCF3-214ENST00000480562 PRNPP04156 253 aa19.25■□□□□ 0.67
ABCF3-214ENST00000480562 THEGLP0DJG4 465 aa19.25■□□□□ 0.67
ABCF3-214ENST00000480562 CLCN6P51797 869 aa19.25■□□□□ 0.67
ABCF3-214ENST00000480562 NOMO3P69849 1222 aa19.25■□□□□ 0.67
ABCF3-214ENST00000480562 ZNF284Q2VY69 593 aa19.25■□□□□ 0.67
ABCF3-214ENST00000480562 RAB6CQ53S08 254 aa19.25■□□□□ 0.67
ABCF3-214ENST00000480562 TCP11X2Q5H9J9 407 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms