RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 TLR4O00206 839 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 MCF2LO15068 1137 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 YKT6O15498 198 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 RNGTTO60942 597 aaKnown RBP6.84□□□□□ -1.31
FN1-220ENST00000480024 SRGAP2O75044 1071 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 SDC3O75056 442 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 RFPL3O75679 317 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 ENDOD1O94919 500 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 LSM8O95777 96 aaKnown RBP6.84□□□□□ -1.31
FN1-220ENST00000480024 F9P00740 461 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 MMEP08473 750 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 UCHL3P15374 230 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 GLDCP23378 1020 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 ERCC5P28715 1186 aaPredicted RBP6.84□□□□□ -1.31
FN1-220ENST00000480024 OR1E1P30953 314 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 CHRNA3P32297 505 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 CDH5P33151 784 aaPredicted RBP6.84□□□□□ -1.31
FN1-220ENST00000480024 CXCR3P49682 368 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 VASPP50552 380 aaPredicted RBP6.84□□□□□ -1.31
FN1-220ENST00000480024 TAS2R38P59533 333 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 NOMO3P69849 1222 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 KRT83P78385 493 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 ATP11AP98196 1134 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 CYP4F3Q08477 520 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 BNIP3Q12983 259 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 SMAD1Q15797 465 aaKnown RBP6.84□□□□□ -1.31
FN1-220ENST00000480024 COL28A1Q2UY09 1125 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 SLC25A52Q3SY17 297 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 C5orf22Q49AR2 442 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 SETMARQ53H47 684 aaPredicted RBP6.84□□□□□ -1.31
FN1-220ENST00000480024 C6orf118Q5T5N4 469 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 PIP5KL1Q5T9C9 394 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 KLHDC7AQ5VTJ3 777 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 LRRC31Q6UY01 552 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 SETD3Q86TU7 594 aaPredicted RBP6.84□□□□□ -1.31
FN1-220ENST00000480024 PRPF39Q86UA1 669 aaKnown RBP6.84□□□□□ -1.31
FN1-220ENST00000480024 TRIM69Q86WT6 500 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 ERICH1Q86X53 443 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 FAM131BQ86XD5 332 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 SPATS2Q86XZ4 545 aaKnown RBP6.84□□□□□ -1.31
FN1-220ENST00000480024 ZNF683Q8IZ20 524 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 OXR1Q8N573 874 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 EMC1Q8N766 993 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 MFSD2AQ8NA29 543 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 CHST14Q8NCH0 376 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 MSANTD4Q8NCY6 345 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 OR7D4Q8NG98 312 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 OR2A12Q8NGT7 310 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 EPS8L1Q8TE68 723 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 SLC20A1Q8WUM9 679 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 CPA5Q8WXQ8 436 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 NT5C3BQ969T7 300 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 ARRDC3Q96B67 414 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 C18orf8Q96DM3 657 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 PGAP3Q96FM1 320 aaPredicted RBP6.84□□□□□ -1.31
FN1-220ENST00000480024 CCDC114Q96M63 670 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 CFAP57Q96MR6 1250 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 SPON2Q9BUD6 331 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 KDM4CQ9H3R0 1056 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 PREBQ9HCU5 417 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 FZD3Q9NPG1 666 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 METTL5Q9NRN9 209 aaKnown RBP6.84□□□□□ -1.31
FN1-220ENST00000480024 ARHGAP20Q9P2F6 1191 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 DMTF1Q9Y222 760 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 FARP1Q9Y4F1 1045 aaPredicted RBP6.84□□□□□ -1.31
FN1-220ENST00000480024 GPSM3Q9Y4H4 160 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 PTPRQQ9UMZ3 2332 aa6.84□□□□□ -1.31
FN1-220ENST00000480024 LAMA5O15230 3695 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 CHD5Q8TDI0 1954 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 A0A1W2PQU0 124 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 TRABD2BA6NFA1 517 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 PRAMEF26H0Y7S4 382 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 RNF103O00237 685 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 SLC31A1O15431 190 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 SMAD6O43541 496 aaKnown RBP6.83□□□□□ -1.32
FN1-220ENST00000480024 LEFTY1O75610 366 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 GFPT2O94808 682 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 PRNPP04156 253 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 HNF1BP35680 557 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 NUDT1P36639 197 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 SCNN1AP37088 669 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 RECQLP46063 649 aaPredicted RBP6.83□□□□□ -1.32
FN1-220ENST00000480024 GABRB2P47870 512 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 ACADVLP49748 655 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 KLK7P49862 253 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 CLCN6P51797 869 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 KCNMA1Q12791 1236 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 CAMK2BQ13554 666 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 STAT4Q14765 748 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 CDO1Q16878 200 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 RAB6CQ53S08 254 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 TCP11X2Q5H9J9 407 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 SFMBT2Q5VUG0 894 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 SEL1L3Q68CR1 1132 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 SMYD5Q6GMV2 418 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 DPY19L3Q6ZPD9 716 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 PHLDB2Q86SQ0 1253 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 IQCHQ86VS3 1027 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 TMPRSS12Q86WS5 348 aa6.83□□□□□ -1.32
FN1-220ENST00000480024 DRC7Q8IY82 874 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms