RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 ZNF606Q8WXB4 792 aa16.05■□□□□ 0.16
HDLBP-238ENST00000479894 TWNKQ96RR1 684 aa16.05■□□□□ 0.16
HDLBP-238ENST00000479894 OMDQ99983 421 aa16.05■□□□□ 0.16
HDLBP-238ENST00000479894 DUSP16Q9BY84 665 aa16.05■□□□□ 0.16
HDLBP-238ENST00000479894 IMPACTQ9P2X3 320 aa16.05■□□□□ 0.16
HDLBP-238ENST00000479894 HMGXB4Q9UGU5 601 aa16.05■□□□□ 0.16
HDLBP-238ENST00000479894 PCDHGA8Q9Y5G5 932 aa16.05■□□□□ 0.16
HDLBP-238ENST00000479894 SLC12A8A0AV02 714 aa16.04■□□□□ 0.16
HDLBP-238ENST00000479894 O00370 1275 aa16.04■□□□□ 0.16
HDLBP-238ENST00000479894 SUV39H1O43463 412 aa16.04■□□□□ 0.16
HDLBP-238ENST00000479894 RNASEH2AO75792 299 aaKnown RBP16.04■□□□□ 0.16
HDLBP-238ENST00000479894 GFPT2O94808 682 aa16.04■□□□□ 0.16
HDLBP-238ENST00000479894 ADCY5O95622 1261 aa16.04■□□□□ 0.16
HDLBP-238ENST00000479894 LSM8O95777 96 aaKnown RBP16.04■□□□□ 0.16
HDLBP-238ENST00000479894 LATS1O95835 1130 aa16.04■□□□□ 0.16
HDLBP-238ENST00000479894 CYP11B1P15538 503 aa16.04■□□□□ 0.16
HDLBP-238ENST00000479894 CLCN1P35523 988 aa16.04■□□□□ 0.16
HDLBP-238ENST00000479894 MLLT3P42568 568 aaPredicted RBP16.04■□□□□ 0.16
HDLBP-238ENST00000479894 BST2Q10589 180 aaKnown RBP16.04■□□□□ 0.16
HDLBP-238ENST00000479894 ASIC2Q16515 512 aa16.04■□□□□ 0.16
HDLBP-238ENST00000479894 HNRNPA1L2Q32P51 320 aaKnown RBP16.04■□□□□ 0.16
HDLBP-238ENST00000479894 SND1Q7KZF4 910 aaKnown RBP eCLIP16.04■□□□□ 0.16
HDLBP-238ENST00000479894 TMC6Q7Z403 805 aa16.04■□□□□ 0.16
HDLBP-238ENST00000479894 KDM1BQ8NB78 822 aa16.04■□□□□ 0.16
HDLBP-238ENST00000479894 STK32AQ8WU08 396 aa16.04■□□□□ 0.16
HDLBP-238ENST00000479894 CPLX3Q8WVH0 158 aa16.04■□□□□ 0.16
HDLBP-238ENST00000479894 TMA16Q96EY4 203 aaKnown RBP16.04■□□□□ 0.16
HDLBP-238ENST00000479894 MYO19Q96H55 970 aa16.04■□□□□ 0.16
HDLBP-238ENST00000479894 SLC46A1Q96NT5 459 aa16.04■□□□□ 0.16
HDLBP-238ENST00000479894 IRX2Q9BZI1 471 aaPredicted RBP16.04■□□□□ 0.16
HDLBP-238ENST00000479894 TTYH3Q9C0H2 523 aa16.04■□□□□ 0.16
HDLBP-238ENST00000479894 USP29Q9HBJ7 922 aa16.04■□□□□ 0.16
HDLBP-238ENST00000479894 PCDHGC3Q9UN70 934 aa16.04■□□□□ 0.16
HDLBP-238ENST00000479894 DMTF1Q9Y222 760 aa16.04■□□□□ 0.16
HDLBP-238ENST00000479894 RP1P56715 2156 aa16.04■□□□□ 0.16
HDLBP-238ENST00000479894 TARSL2A2RTX5 802 aaKnown RBP16.03■□□□□ 0.16
HDLBP-238ENST00000479894 AKR1B15C9JRZ8 316 aaPredicted RBP16.03■□□□□ 0.16
HDLBP-238ENST00000479894 RNF225M0QZC1 329 aaPredicted RBP16.03■□□□□ 0.16
HDLBP-238ENST00000479894 EPHB6O15197 1021 aa16.03■□□□□ 0.16
HDLBP-238ENST00000479894 SIN3BO75182 1162 aa16.03■□□□□ 0.16
HDLBP-238ENST00000479894 SFTPCP11686 197 aa16.03■□□□□ 0.16
HDLBP-238ENST00000479894 GOT1P17174 413 aa16.03■□□□□ 0.16
HDLBP-238ENST00000479894 SLC8A1P32418 973 aa16.03■□□□□ 0.16
HDLBP-238ENST00000479894 HARS2P49590 506 aaKnown RBP16.03■□□□□ 0.16
HDLBP-238ENST00000479894 ADPRHP54922 357 aa16.03■□□□□ 0.16
HDLBP-238ENST00000479894 ST8SIA6P61647 398 aa16.03■□□□□ 0.16
HDLBP-238ENST00000479894 GOLGA7BQ2TAP0 167 aa16.03■□□□□ 0.16
HDLBP-238ENST00000479894 MPP7Q5T2T1 576 aa16.03■□□□□ 0.16
HDLBP-238ENST00000479894 PPP1R26Q5T8A7 1209 aaPredicted RBP16.03■□□□□ 0.16
HDLBP-238ENST00000479894 PRPF39Q86UA1 669 aaKnown RBP16.03■□□□□ 0.16
HDLBP-238ENST00000479894 SLC25A45Q8N413 288 aa16.03■□□□□ 0.16
HDLBP-238ENST00000479894 TMEM35BQ8NCS4 154 aa16.03■□□□□ 0.16
HDLBP-238ENST00000479894 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.03■□□□□ 0.16
HDLBP-238ENST00000479894 KDM4CQ9H3R0 1056 aa16.03■□□□□ 0.16
HDLBP-238ENST00000479894 EVA1BQ9NVM1 165 aa16.03■□□□□ 0.16
HDLBP-238ENST00000479894 TSPAN16Q9UKR8 245 aa16.03■□□□□ 0.16
HDLBP-238ENST00000479894 NOTCH2Q04721 2471 aa16.03■□□□□ 0.16
HDLBP-238ENST00000479894 A0A1B0GVM2 712 aa16.02■□□□□ 0.16
HDLBP-238ENST00000479894 LRRC53A6NM62 1247 aa16.02■□□□□ 0.16
HDLBP-238ENST00000479894 SDC3O75056 442 aa16.02■□□□□ 0.16
HDLBP-238ENST00000479894 ASLP04424 464 aa16.02■□□□□ 0.16
HDLBP-238ENST00000479894 GYPCP04921 128 aa16.02■□□□□ 0.16
HDLBP-238ENST00000479894 CASP14P31944 242 aa16.02■□□□□ 0.16
HDLBP-238ENST00000479894 ACADSBP45954 432 aa16.02■□□□□ 0.16
HDLBP-238ENST00000479894 INHBCP55103 352 aa16.02■□□□□ 0.16
HDLBP-238ENST00000479894 CDR2Q01850 454 aa16.02■□□□□ 0.16
HDLBP-238ENST00000479894 KLHL30Q0D2K2 578 aa16.02■□□□□ 0.16
HDLBP-238ENST00000479894 ISXQ2M1V0 245 aa16.02■□□□□ 0.16
HDLBP-238ENST00000479894 LINC00303Q3SY05 128 aa16.02■□□□□ 0.16
HDLBP-238ENST00000479894 RSRC2Q7L4I2 434 aaKnown RBP16.02■□□□□ 0.16
HDLBP-238ENST00000479894 SLC47A2Q86VL8 602 aa16.02■□□□□ 0.16
HDLBP-238ENST00000479894 OR14C36Q8NHC7 312 aa16.02■□□□□ 0.16
HDLBP-238ENST00000479894 TTC17Q96AE7 1141 aa16.02■□□□□ 0.16
HDLBP-238ENST00000479894 HSFY1Q96LI6 401 aa16.02■□□□□ 0.16
HDLBP-238ENST00000479894 SEMA3CQ99985 751 aa16.02■□□□□ 0.16
HDLBP-238ENST00000479894 ARHGAP20Q9P2F6 1191 aa16.02■□□□□ 0.16
HDLBP-238ENST00000479894 SEPT3Q9UH03 358 aa16.02■□□□□ 0.16
HDLBP-238ENST00000479894 SATB2Q9UPW6 733 aa16.02■□□□□ 0.16
HDLBP-238ENST00000479894 USP9YO00507 2555 aaPredicted RBP16.02■□□□□ 0.15
HDLBP-238ENST00000479894 CDRT15L2A8MXV6 281 aa16.01■□□□□ 0.15
HDLBP-238ENST00000479894 M0QYV0 167 aa16.01■□□□□ 0.15
HDLBP-238ENST00000479894 XPO1O14980 1071 aaKnown RBP16.01■□□□□ 0.15
HDLBP-238ENST00000479894 SART1O43290 800 aaKnown RBP16.01■□□□□ 0.15
HDLBP-238ENST00000479894 ADH1BP00325 375 aa16.01■□□□□ 0.15
HDLBP-238ENST00000479894 ITGB2P05107 769 aa16.01■□□□□ 0.15
HDLBP-238ENST00000479894 SERPING1P05155 500 aa16.01■□□□□ 0.15
HDLBP-238ENST00000479894 C5AR1P21730 350 aa16.01■□□□□ 0.15
HDLBP-238ENST00000479894 DGKAP23743 735 aa16.01■□□□□ 0.15
HDLBP-238ENST00000479894 BRD2P25440 801 aaKnown RBP16.01■□□□□ 0.15
HDLBP-238ENST00000479894 HNRNPH3P31942 346 aaKnown RBP16.01■□□□□ 0.15
HDLBP-238ENST00000479894 PRKCIP41743 596 aa16.01■□□□□ 0.15
HDLBP-238ENST00000479894 DUSP3P51452 185 aaPredicted RBP16.01■□□□□ 0.15
HDLBP-238ENST00000479894 GSDMDP57764 484 aa16.01■□□□□ 0.15
HDLBP-238ENST00000479894 SERINC3Q13530 473 aa16.01■□□□□ 0.15
HDLBP-238ENST00000479894 UBAP2LQ14157 1087 aaKnown RBP16.01■□□□□ 0.15
HDLBP-238ENST00000479894 C3orf38Q5JPI3 329 aa16.01■□□□□ 0.15
HDLBP-238ENST00000479894 ADGRF1Q5T601 910 aa16.01■□□□□ 0.15
HDLBP-238ENST00000479894 C9orf64Q5T6V5 341 aa16.01■□□□□ 0.15
HDLBP-238ENST00000479894 CLEC14AQ86T13 490 aa16.01■□□□□ 0.15
HDLBP-238ENST00000479894 MMAAQ8IVH4 418 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms