RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 FATE1Q969F0 183 aa16.51■□□□□ 0.23
VHL-203ENST00000477538 NKD2Q969F2 451 aaPredicted RBP16.51■□□□□ 0.23
VHL-203ENST00000477538 MAGOHBQ96A72 148 aaKnown RBP16.51■□□□□ 0.23
VHL-203ENST00000477538 SHDQ96IW2 340 aa16.51■□□□□ 0.23
VHL-203ENST00000477538 RPL10LQ96L21 214 aaKnown RBP16.51■□□□□ 0.23
VHL-203ENST00000477538 C10orf88Q9H8K7 445 aa16.51■□□□□ 0.23
VHL-203ENST00000477538 UBA2Q9UBT2 640 aaPredicted RBP16.51■□□□□ 0.23
VHL-203ENST00000477538 ERVW-1Q9UQF0 538 aa16.51■□□□□ 0.23
VHL-203ENST00000477538 TECTAO75443 2155 aa16.5■□□□□ 0.23
VHL-203ENST00000477538 CXorf51AA0A1B0GTR3 108 aa16.5■□□□□ 0.23
VHL-203ENST00000477538 BCLAF3A2AJT9 711 aaKnown RBP16.5■□□□□ 0.23
VHL-203ENST00000477538 KRBA1A5PL33 1030 aa16.5■□□□□ 0.23
VHL-203ENST00000477538 CCDC188H7C350 402 aa16.5■□□□□ 0.23
VHL-203ENST00000477538 MATN3O15232 486 aa16.5■□□□□ 0.23
VHL-203ENST00000477538 MTSS1O43312 755 aa16.5■□□□□ 0.23
VHL-203ENST00000477538 EGFP01133 1207 aa16.5■□□□□ 0.23
VHL-203ENST00000477538 DLDP09622 509 aaKnown RBP16.5■□□□□ 0.23
VHL-203ENST00000477538 CD72P21854 359 aa16.5■□□□□ 0.23
VHL-203ENST00000477538 RBL1P28749 1068 aa16.5■□□□□ 0.23
VHL-203ENST00000477538 TNFRSF4P43489 277 aa16.5■□□□□ 0.23
VHL-203ENST00000477538 STK19P49842 368 aaPredicted RBP16.5■□□□□ 0.23
VHL-203ENST00000477538 CLCN6P51797 869 aa16.5■□□□□ 0.23
VHL-203ENST00000477538 ZXDAP98168 799 aa16.5■□□□□ 0.23
VHL-203ENST00000477538 SLC20A2Q08357 652 aa16.5■□□□□ 0.23
VHL-203ENST00000477538 TMCO4Q5TGY1 634 aa16.5■□□□□ 0.23
VHL-203ENST00000477538 HEATR6Q6AI08 1181 aaKnown RBP16.5■□□□□ 0.23
VHL-203ENST00000477538 ZNF572Q7Z3I7 529 aaPredicted RBP16.5■□□□□ 0.23
VHL-203ENST00000477538 HTR3CQ8WXA8 447 aa16.5■□□□□ 0.23
VHL-203ENST00000477538 EZH1Q92800 747 aaPredicted RBP16.5■□□□□ 0.23
VHL-203ENST00000477538 ZNF599Q96NL3 588 aa16.5■□□□□ 0.23
VHL-203ENST00000477538 TMEM121Q9BTD3 319 aa16.5■□□□□ 0.23
VHL-203ENST00000477538 RBM12Q9NTZ6 932 aaKnown RBP16.5■□□□□ 0.23
VHL-203ENST00000477538 SEPT10Q9P0V9 454 aa16.5■□□□□ 0.23
VHL-203ENST00000477538 NDRG2Q9UN36 371 aaKnown RBP16.5■□□□□ 0.23
VHL-203ENST00000477538 ZNF148Q9UQR1 794 aa16.5■□□□□ 0.23
VHL-203ENST00000477538 ACTL7AQ9Y615 435 aa16.5■□□□□ 0.23
VHL-203ENST00000477538 CFAP69A5D8W1 941 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 K7EQS6 105 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 KCNK1O00180 336 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 KCNN4O15554 427 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 ZNF189O75820 626 aaPredicted RBP16.49■□□□□ 0.23
VHL-203ENST00000477538 CD160O95971 181 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 PEX11BO96011 259 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 MT-CO1P00395 513 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 ITGAVP06756 1048 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 SRPRAP08240 638 aaKnown RBP16.49■□□□□ 0.23
VHL-203ENST00000477538 CCNB1P14635 433 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 CHRNA3P32297 505 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 COILP38432 576 aaPredicted RBP16.49■□□□□ 0.23
VHL-203ENST00000477538 KCNJ1P48048 391 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 SERPINH1P50454 418 aaKnown RBP16.49■□□□□ 0.23
VHL-203ENST00000477538 SEC13P55735 322 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 STARD6P59095 220 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 IFI35P80217 286 aaPredicted RBP16.49■□□□□ 0.23
VHL-203ENST00000477538 C2orf54Q08AI8 447 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 TTC27Q6P3X3 843 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 CCDC137Q6PK04 289 aaKnown RBP16.49■□□□□ 0.23
VHL-203ENST00000477538 SIX5Q8N196 739 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 SH2D3CQ8N5H7 860 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 ATP11CQ8NB49 1132 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 SPATA4Q8NEY3 305 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 MAML1Q92585 1016 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 CCDC114Q96M63 670 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 FERMT1Q9BQL6 677 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 DDX47Q9H0S4 455 aaKnown RBP16.49■□□□□ 0.23
VHL-203ENST00000477538 PLA2G4CQ9UP65 541 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 HS3ST2Q9Y278 367 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 DRG1Q9Y295 367 aaKnown RBP16.49■□□□□ 0.23
VHL-203ENST00000477538 MRPS17Q9Y2R5 130 aaKnown RBP16.49■□□□□ 0.23
VHL-203ENST00000477538 STARD13Q9Y3M8 1113 aa16.49■□□□□ 0.23
VHL-203ENST00000477538 SGK1O00141 431 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 RNF103O00237 685 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 NEBLO76041 1014 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 TMCC1O94876 653 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 SRCP12931 536 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 NNMTP40261 264 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 FNTAP49354 379 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 VASPP50552 380 aaPredicted RBP16.48■□□□□ 0.23
VHL-203ENST00000477538 RENBPP51606 427 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 ST8SIA6P61647 398 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 SLC10A7Q0GE19 358 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 ZBTB17Q13105 803 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 HNRNPDQ14103 355 aaKnown RBP16.48■□□□□ 0.23
VHL-203ENST00000477538 ZNF235Q14590 738 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 RFTN1Q14699 578 aaPredicted RBP16.48■□□□□ 0.23
VHL-203ENST00000477538 LBRQ14739 615 aaKnown RBP16.48■□□□□ 0.23
VHL-203ENST00000477538 E2F5Q15329 346 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 PTPRNQ16849 979 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 FNDC3BQ53EP0 1204 aaKnown RBP16.48■□□□□ 0.23
VHL-203ENST00000477538 INO80DQ53TQ3 878 aaPredicted RBP16.48■□□□□ 0.23
VHL-203ENST00000477538 MARC1Q5VT66 337 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 EGFLAMQ63HQ2 1017 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 METTL3Q86U44 580 aaKnown RBP16.48■□□□□ 0.23
VHL-203ENST00000477538 KLHL7Q8IXQ5 586 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 BBS5Q8N3I7 341 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 MNS1Q8NEH6 495 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 USP33Q8TEY7 942 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 CASKIN2Q8WXE0 1202 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 MRGPRX3Q96LB0 322 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 CINPQ9BW66 212 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms