RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.94■□□□□ 0.3
TVP23B-202ENST00000476139 SKIP12755 728 aa16.94■□□□□ 0.3
TVP23B-202ENST00000476139 SAT1P21673 171 aa16.94■□□□□ 0.3
TVP23B-202ENST00000476139 CCNCP24863 283 aa16.94■□□□□ 0.3
TVP23B-202ENST00000476139 SLC1A6P48664 564 aa16.94■□□□□ 0.3
TVP23B-202ENST00000476139 ZNF135P52742 658 aaPredicted RBP16.94■□□□□ 0.3
TVP23B-202ENST00000476139 LIMK2P53671 638 aa16.94■□□□□ 0.3
TVP23B-202ENST00000476139 CDH17Q12864 832 aa16.94■□□□□ 0.3
TVP23B-202ENST00000476139 COLGALT2Q8IYK4 626 aa16.94■□□□□ 0.3
TVP23B-202ENST00000476139 TBC1D13Q9NVG8 400 aa16.94■□□□□ 0.3
TVP23B-202ENST00000476139 SPRP35270 261 aaPredicted RBP16.93■□□□□ 0.3
TVP23B-202ENST00000476139 NPY2RP49146 381 aa16.93■□□□□ 0.3
TVP23B-202ENST00000476139 DSC1Q08554 894 aa16.93■□□□□ 0.3
TVP23B-202ENST00000476139 NAB1Q13506 487 aa16.93■□□□□ 0.3
TVP23B-202ENST00000476139 NOMO2Q5JPE7 1267 aa16.93■□□□□ 0.3
TVP23B-202ENST00000476139 STXBP5Q5T5C0 1151 aa16.93■□□□□ 0.3
TVP23B-202ENST00000476139 MANEALQ5VSG8 457 aa16.93■□□□□ 0.3
TVP23B-202ENST00000476139 RNF180Q86T96 592 aa16.93■□□□□ 0.3
TVP23B-202ENST00000476139 ACSS2Q9NR19 701 aa16.93■□□□□ 0.3
TVP23B-202ENST00000476139 COPG2Q9UBF2 871 aa16.93■□□□□ 0.3
TVP23B-202ENST00000476139 SUFUQ9UMX1 484 aa16.93■□□□□ 0.3
TVP23B-202ENST00000476139 DNAJC16Q9Y2G8 782 aa16.93■□□□□ 0.3
TVP23B-202ENST00000476139 KCNU1A8MYU2 1149 aa16.93■□□□□ 0.3
TVP23B-202ENST00000476139 E9PAM4 449 aa16.93■□□□□ 0.3
TVP23B-202ENST00000476139 UBAP2LQ14157 1087 aaKnown RBP16.93■□□□□ 0.3
TVP23B-202ENST00000476139 PRPSAP1Q14558 356 aa16.93■□□□□ 0.3
TVP23B-202ENST00000476139 BRMS1LQ5PSV4 323 aa16.93■□□□□ 0.3
TVP23B-202ENST00000476139 WASHC2DQ5SRD0 308 aa16.93■□□□□ 0.3
TVP23B-202ENST00000476139 NAPEPLDQ6IQ20 393 aa16.93■□□□□ 0.3
TVP23B-202ENST00000476139 SOX13Q9UN79 622 aa16.93■□□□□ 0.3
TVP23B-202ENST00000476139 MPP3Q13368 585 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 BEND5Q7L4P6 421 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 TFAP2DQ7Z6R9 452 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 RAB3IL1Q8TBN0 382 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 TSGA13Q96PP4 275 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 OXCT2Q9BYC2 517 aaPredicted RBP16.92■□□□□ 0.3
TVP23B-202ENST00000476139 SHCBP1LQ9BZQ2 653 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 TLE6Q9H808 572 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 HCSTQ9UBK5 93 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 A0A096LPK6 155 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 MAGEB16A2A368 324 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 CACNG3O60359 315 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 PMPCBO75439 489 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 OAZ2O95190 189 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 PGM1P36871 562 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 PAPOLAP51003 745 aaKnown RBP16.92■□□□□ 0.3
TVP23B-202ENST00000476139 ARPP19P56211 112 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 SP3Q02447 781 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 ITGA9Q13797 1035 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 PIK3R6Q5UE93 754 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 SHKBP1Q8TBC3 707 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 PIWIL2Q8TC59 973 aaKnown RBP16.92■□□□□ 0.3
TVP23B-202ENST00000476139 GLT1D1Q96MS3 346 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 FAM161BQ96MY7 647 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 ZCWPW1Q9H0M4 648 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 PNPOQ9NVS9 261 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 RBM22Q9NW64 420 aaKnown RBP eCLIP16.92■□□□□ 0.3
TVP23B-202ENST00000476139 NLRC5Q86WI3 1866 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 MATN3O15232 486 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 TADA2AO75478 443 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 HLA-DQB2P05538 268 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 CYP2C18P33260 490 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 MLLT6P55198 1093 aaPredicted RBP16.92■□□□□ 0.3
TVP23B-202ENST00000476139 THOC5Q13769 683 aaKnown RBP16.92■□□□□ 0.3
TVP23B-202ENST00000476139 DENND5AQ6IQ26 1287 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 SPNS2Q8IVW8 549 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 TEX9Q8N6V9 391 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.92■□□□□ 0.3
TVP23B-202ENST00000476139 SORT1Q99523 831 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 CATSPERBQ9H7T0 1116 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 CPSF2Q9P2I0 782 aaKnown RBP16.92■□□□□ 0.3
TVP23B-202ENST00000476139 SLC39A10Q9ULF5 831 aa16.92■□□□□ 0.3
TVP23B-202ENST00000476139 CAPN14A8MX76 684 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 EOMESO95936 686 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 C2P06681 752 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 GABRB3P28472 473 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 HOXC13P31276 330 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 COG7P83436 770 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 MAB21L3Q8N8X9 362 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 URGCPQ8TCY9 931 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 VPS39Q96JC1 886 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 IL12RB2Q99665 862 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 FICDQ9BVA6 458 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 TRIM62Q9BVG3 475 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 FTHL17Q9BXU8 183 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 GLOD4Q9HC38 313 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 SLC2A6Q9UGQ3 507 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 SLC27A5Q9Y2P5 690 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 MEI4A8MW99 385 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 PRR5-ARHGAP8B1AHC4 643 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 INPPL1O15357 1258 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 VAPBO95292 243 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 CPA3P15088 417 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 MAGEA12P43365 314 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 CHRNA4P43681 627 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 ARHGAP8P85298 464 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 CTBP1Q13363 440 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 GRM3Q14832 879 aa16.91■□□□□ 0.3
TVP23B-202ENST00000476139 VARS2Q5ST30 1063 aaKnown RBP16.91■□□□□ 0.3
TVP23B-202ENST00000476139 VWA5B1Q5TIE3 1220 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms