RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 KLHL17Q6TDP4 642 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 RBM23Q86U06 439 aaKnown RBP11.12□□□□□ -0.63
VAPB-204ENST00000475243 PCDH20Q8N6Y1 951 aaKnown RBP11.12□□□□□ -0.63
VAPB-204ENST00000475243 C12orf29Q8N999 325 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 C1QTNF7Q9BXJ2 289 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 IQCMA0A1B0GVH7 501 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 GJB1P08034 283 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 SPIDRQ14159 915 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 TRMT5Q32P41 509 aaKnown RBP11.12□□□□□ -0.63
VAPB-204ENST00000475243 TMEM119Q4V9L6 283 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 ZNF544Q6NX49 715 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 BRSK2Q8IWQ3 736 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 ZC3H7AQ8IWR0 971 aaKnown RBP11.12□□□□□ -0.63
VAPB-204ENST00000475243 FAM20CQ8IXL6 584 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 UBASH3BQ8TF42 649 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 PYDC1Q8WXC3 89 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 DGCR6LQ9BY27 220 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 ABCG8Q9H221 673 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 CYLDQ9NQC7 956 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.12□□□□□ -0.63
VAPB-204ENST00000475243 IL1BP01584 269 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 IFNA16P05015 189 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 SERPINA4P29622 427 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 AXLP30530 894 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 TSNQ15631 228 aaKnown RBP11.12□□□□□ -0.63
VAPB-204ENST00000475243 KIAA1324Q6UXG2 1013 aaKnown RBP11.12□□□□□ -0.63
VAPB-204ENST00000475243 DSG4Q86SJ6 1040 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 TMPRSS6Q8IU80 811 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 SPATA6LQ8N4H0 392 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 RNASE11Q8TAA1 199 aaKnown RBP11.12□□□□□ -0.63
VAPB-204ENST00000475243 SELENOMQ8WWX9 145 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 BTBD9Q96Q07 612 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 MYLK2Q9H1R3 596 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 ANKRD6Q9Y2G4 727 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 APOBEC3HQ6NTF7 200 aaKnown RBP11.12□□□□□ -0.63
VAPB-204ENST00000475243 CNSTQ6PJW8 725 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 ZPBP2Q6X784 338 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 VCPIP1Q96JH7 1222 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 MYOCQ99972 504 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 PRKD2Q9BZL6 878 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 PCDH12Q9NPG4 1184 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 ADPRHL2Q9NX46 363 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 PCDHAC2Q9Y5I4 1007 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 CLOCKO15516 846 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 NDUFS2O75306 463 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 BANF1O75531 89 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 CAPN15O75808 1086 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 ZMPSTE24O75844 475 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 PIGNO95427 931 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 FAM58BPP0C7Q3 252 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 PIK3R1P27986 724 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 NOS2P35228 1153 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 ZNF844Q08AG5 666 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 LZTR1Q8N653 840 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 HELQQ8TDG4 1101 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 SATB2Q9UPW6 733 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 PTPRUQ92729 1446 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 SALL1Q9NSC2 1324 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 A0A087X1B8 175 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 SMIM22K7EJ46 135 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 ALOX12P18054 663 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 HDCP19113 662 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 MAXP61244 160 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 PPP3CAQ08209 521 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 IQSEC1Q6DN90 963 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 TTC7BQ86TV6 843 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 MPP4Q96JB8 637 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 ZNF624Q9P2J8 865 aaPredicted RBP11.11□□□□□ -0.63
VAPB-204ENST00000475243 DNMT3LQ9UJW3 386 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 TNS2Q63HR2 1409 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 TRAV19A0A0A6YYK7 116 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 SPATA31D3P0C874 917 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 ZNF37AP17032 561 aaPredicted RBP11.11□□□□□ -0.63
VAPB-204ENST00000475243 SPATA31D4Q6ZUB0 917 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 PSTKQ8IV42 348 aaKnown RBP11.11□□□□□ -0.63
VAPB-204ENST00000475243 NAT16Q8N8M0 369 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 CXorf40AQ8TE69 158 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 COG5Q9UP83 839 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 PAEPP09466 180 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 CELF3Q5SZQ8 465 aaKnown RBP11.11□□□□□ -0.63
VAPB-204ENST00000475243 RAET1GQ6H3X3 334 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 PRMT9Q6P2P2 845 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 ZDHHC13Q8IUH4 622 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 ETNPPLQ8TBG4 499 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 IPCEF1Q8WWN9 437 aaPredicted RBP11.11□□□□□ -0.63
VAPB-204ENST00000475243 REPS1Q96D71 796 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 MLPHQ9BV36 600 aaPredicted RBP11.11□□□□□ -0.63
VAPB-204ENST00000475243 UGT2B28Q9BY64 529 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 GRIP2Q9C0E4 1043 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 PAIP1Q9H074 479 aaKnown RBP11.11□□□□□ -0.63
VAPB-204ENST00000475243 LOC100506127A0A0U1RQW1 187 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 H2AFXP16104 143 aaPredicted RBP11.11□□□□□ -0.63
VAPB-204ENST00000475243 NPR3P17342 541 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 TNFSF9P41273 254 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 MRPS22P82650 360 aaKnown RBP11.11□□□□□ -0.63
VAPB-204ENST00000475243 GCNT1Q02742 428 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 BIKQ13323 160 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 FOXR1Q6PIV2 292 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 PORCNQ9H237 461 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 MICAL3Q7RTP6 2002 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms