RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 Q6ZVU0 165 aa13.87□□□□□ -0.19
CHD3-209ENST00000473376 PDZD3Q86UT5 571 aa13.87□□□□□ -0.19
CHD3-209ENST00000473376 ZNF677Q86XU0 584 aa13.87□□□□□ -0.19
CHD3-209ENST00000473376 SPATS2Q86XZ4 545 aaKnown RBP13.87□□□□□ -0.19
CHD3-209ENST00000473376 GATAD2AQ86YP4 633 aa13.87□□□□□ -0.19
CHD3-209ENST00000473376 CREBRFQ8IUR6 639 aa13.87□□□□□ -0.19
CHD3-209ENST00000473376 PASD1Q8IV76 773 aa13.87□□□□□ -0.19
CHD3-209ENST00000473376 KLHDC7BQ96G42 594 aa13.87□□□□□ -0.19
CHD3-209ENST00000473376 PPP1R16AQ96I34 528 aa13.87□□□□□ -0.19
CHD3-209ENST00000473376 PSMB7Q99436 277 aa13.87□□□□□ -0.19
CHD3-209ENST00000473376 TUBGCP2Q9BSJ2 902 aa13.87□□□□□ -0.19
CHD3-209ENST00000473376 RALYQ9UKM9 306 aaKnown RBP13.87□□□□□ -0.19
CHD3-209ENST00000473376 SYNJ2BP-COX16A0A087WUM0 186 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 GOLGA8CPA6NN73 597 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 ADCY5O95622 1261 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 RHOCP08134 193 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 OR1E1P30953 314 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 IL9RQ01113 521 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 DEUP1Q05D60 604 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 MIIPQ5JXC2 388 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 KLHDC7AQ5VTJ3 777 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 C14orf80Q86SX3 495 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 HORMAD1Q86X24 394 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 ERICH1Q86X53 443 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 EID2Q8N6I1 236 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 ATP11CQ8NB49 1132 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 ISG20Q96AZ6 181 aaKnown RBP13.86□□□□□ -0.19
CHD3-209ENST00000473376 LRIG1Q96JA1 1093 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 NAA15Q9BXJ9 866 aaKnown RBP13.86□□□□□ -0.19
CHD3-209ENST00000473376 STK33Q9BYT3 514 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 SIK2Q9H0K1 926 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 PDCL3Q9H2J4 239 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 USP29Q9HBJ7 922 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 PLCB1Q9NQ66 1216 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 DYRK4Q9NR20 520 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 COX16Q9P0S2 106 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 ZNF212Q9UDV6 495 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 VPS51Q9UID3 782 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 TMEM59LQ9UK28 342 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 RAXQ9Y2V3 346 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 HS3ST3A1Q9Y663 406 aa13.86□□□□□ -0.19
CHD3-209ENST00000473376 PLXNA2O75051 1894 aa13.85□□□□□ -0.19
CHD3-209ENST00000473376 TMEM131Q92545 1883 aa13.85□□□□□ -0.19
CHD3-209ENST00000473376 I6L893 689 aaPredicted RBP13.85□□□□□ -0.19
CHD3-209ENST00000473376 AP1G1O43747 822 aa13.85□□□□□ -0.19
CHD3-209ENST00000473376 CNTN5O94779 1100 aa13.85□□□□□ -0.19
CHD3-209ENST00000473376 MT-CO1P00395 513 aa13.85□□□□□ -0.19
CHD3-209ENST00000473376 UCHL3P15374 230 aa13.85□□□□□ -0.19
CHD3-209ENST00000473376 HNRNPA2B1P22626 353 aaKnown RBP13.85□□□□□ -0.19
CHD3-209ENST00000473376 EEF1GP26641 437 aaKnown RBP13.85□□□□□ -0.19
CHD3-209ENST00000473376 AKT2P31751 481 aa13.85□□□□□ -0.19
CHD3-209ENST00000473376 RECQLP46063 649 aaPredicted RBP13.85□□□□□ -0.19
CHD3-209ENST00000473376 SULT1E1P49888 294 aa13.85□□□□□ -0.19
CHD3-209ENST00000473376 IRAK1P51617 712 aa13.85□□□□□ -0.19
CHD3-209ENST00000473376 METAP1P53582 386 aa13.85□□□□□ -0.19
CHD3-209ENST00000473376 GEMIN4P57678 1058 aaKnown RBP13.85□□□□□ -0.19
CHD3-209ENST00000473376 APBA1Q02410 837 aa13.85□□□□□ -0.19
CHD3-209ENST00000473376 DRAP1Q14919 205 aaPredicted RBP13.85□□□□□ -0.19
CHD3-209ENST00000473376 ACAP1Q15027 740 aa13.85□□□□□ -0.19
CHD3-209ENST00000473376 CAMK4Q16566 473 aa13.85□□□□□ -0.19
CHD3-209ENST00000473376 PROX2Q3B8N5 592 aa13.85□□□□□ -0.19
CHD3-209ENST00000473376 ALFQ53S48 1182 aa13.85□□□□□ -0.19
CHD3-209ENST00000473376 PRAMEF14Q5SWL7 426 aa13.85□□□□□ -0.19
CHD3-209ENST00000473376 ARTNQ5T4W7 220 aa13.85□□□□□ -0.19
CHD3-209ENST00000473376 KIAA1161Q6NSJ0 714 aa13.85□□□□□ -0.19
CHD3-209ENST00000473376 ERN2Q76MJ5 926 aaKnown RBP13.85□□□□□ -0.19
CHD3-209ENST00000473376 XYLT1Q86Y38 959 aa13.85□□□□□ -0.19
CHD3-209ENST00000473376 PCDH20Q8N6Y1 951 aaKnown RBP13.85□□□□□ -0.19
CHD3-209ENST00000473376 ASB12Q8WXK4 309 aa13.85□□□□□ -0.19
CHD3-209ENST00000473376 ADAMTS20P59510 1910 aa13.85□□□□□ -0.19
CHD3-209ENST00000473376 URB1O60287 2271 aaKnown RBP13.85□□□□□ -0.19
CHD3-209ENST00000473376 NEMP2A6NFY4 417 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 ZMPSTE24O75844 475 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 GP1BAP07359 652 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 CTSLP07711 333 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 ITGB7P26010 798 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 SERPINH1P50454 418 aaKnown RBP13.84□□□□□ -0.19
CHD3-209ENST00000473376 KCNMA1Q12791 1236 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 BNIP3Q12983 259 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 COL28A1Q2UY09 1125 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 ZNF284Q2VY69 593 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 TMEM259Q4ZIN3 620 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 HS1BP3Q53T59 392 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 FAM102AQ5T9C2 384 aaPredicted RBP13.84□□□□□ -0.19
CHD3-209ENST00000473376 C22orf39Q6P5X5 142 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 ABI3BPQ7Z7G0 1075 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 DCBLD1Q8N8Z6 715 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 FAM181AQ8N9Y4 354 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 LSM14AQ8ND56 463 aaKnown RBP13.84□□□□□ -0.19
CHD3-209ENST00000473376 OR4C6Q8NH72 309 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 RAB7BQ96AH8 199 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 TBCBQ99426 244 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 ZYG11BQ9C0D3 744 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 OSBPL2Q9H1P3 480 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 CLSTN2Q9H4D0 955 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 ANLNQ9NQW6 1124 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 GPR27Q9NS67 375 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 EVA1BQ9NVM1 165 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 NCKIPSDQ9NZQ3 722 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 IL36AQ9UHA7 158 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms