RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 DQX1Q8TE96 717 aaKnown RBP7.13□□□□□ -1.27
CKS1B-205ENST00000473344 CLEC4CQ8WTT0 213 aa7.13□□□□□ -1.27
CKS1B-205ENST00000473344 OR8D1Q8WZ84 308 aa7.13□□□□□ -1.27
CKS1B-205ENST00000473344 PTPRN2Q92932 1015 aa7.13□□□□□ -1.27
CKS1B-205ENST00000473344 RNF34Q969K3 372 aa7.13□□□□□ -1.27
CKS1B-205ENST00000473344 NAF1Q96HR8 494 aaKnown RBP7.13□□□□□ -1.27
CKS1B-205ENST00000473344 LMLNQ96KR4 655 aa7.13□□□□□ -1.27
CKS1B-205ENST00000473344 FCRL2Q96LA5 508 aaPredicted RBP7.13□□□□□ -1.27
CKS1B-205ENST00000473344 HSFY1Q96LI6 401 aa7.13□□□□□ -1.27
CKS1B-205ENST00000473344 FAM129BQ96TA1 746 aa7.13□□□□□ -1.27
CKS1B-205ENST00000473344 ABCG4Q9H172 646 aa7.13□□□□□ -1.27
CKS1B-205ENST00000473344 DEF6Q9H4E7 631 aa7.13□□□□□ -1.27
CKS1B-205ENST00000473344 ARMCX3Q9UH62 379 aaPredicted RBP7.13□□□□□ -1.27
CKS1B-205ENST00000473344 SLC12A6Q9UHW9 1150 aa7.13□□□□□ -1.27
CKS1B-205ENST00000473344 SLC25A13Q9UJS0 675 aa7.13□□□□□ -1.27
CKS1B-205ENST00000473344 NAALADL1Q9UQQ1 740 aa7.13□□□□□ -1.27
CKS1B-205ENST00000473344 COQ4Q9Y3A0 265 aa7.13□□□□□ -1.27
CKS1B-205ENST00000473344 PCDHB4Q9Y5E5 795 aa7.13□□□□□ -1.27
CKS1B-205ENST00000473344 CKAP5Q14008 2032 aa7.13□□□□□ -1.27
CKS1B-205ENST00000473344 COL5A1P20908 1838 aaPredicted RBP7.13□□□□□ -1.27
CKS1B-205ENST00000473344 MUC22E2RYF6 1773 aaPredicted RBP7.13□□□□□ -1.27
CKS1B-205ENST00000473344 TENM4Q6N022 2769 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 ERVH48-1M5A8F1 160 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 PLRG1O43660 514 aaKnown RBP7.12□□□□□ -1.27
CKS1B-205ENST00000473344 SIGLEC6O43699 453 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 BNIP3LO60238 219 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 RTN2O75298 545 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 ADCY5O95622 1261 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 MT-CO3P00414 261 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 TACR2P21452 398 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 DRD3P35462 400 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 STK19P49842 368 aaPredicted RBP7.12□□□□□ -1.27
CKS1B-205ENST00000473344 UCNP55089 124 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 OXCT1P55809 520 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 PCBP4P57723 403 aaKnown RBP7.12□□□□□ -1.27
CKS1B-205ENST00000473344 TMPRSS3P57727 454 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 PPP2CBP62714 309 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 PPP2CAP67775 309 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 CCDC15Q0P6D6 951 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 KCNH2Q12809 1159 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 ZNF211Q13398 564 aaPredicted RBP7.12□□□□□ -1.27
CKS1B-205ENST00000473344 NNTQ13423 1086 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 PKP1Q13835 747 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 RABGAP1LQ5R372 815 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 TTC39BQ5VTQ0 682 aaPredicted RBP7.12□□□□□ -1.27
CKS1B-205ENST00000473344 KRBA2Q6ZNG9 492 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 CCDC91Q7Z6B0 441 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 ERICH1Q86X53 443 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 SPATS2Q86XZ4 545 aaKnown RBP7.12□□□□□ -1.27
CKS1B-205ENST00000473344 SPACA3Q8IXA5 215 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 APCDD1Q8J025 514 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 ATP6V0D2Q8N8Y2 350 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 DCBLD1Q8N8Z6 715 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 EHBP1Q8NDI1 1231 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 RFFLQ8WZ73 363 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 TFAP2BQ92481 460 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 MYEOVQ96EZ4 313 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 KLHDC7BQ96G42 594 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 BTN2A3PQ96KV6 586 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 ZNF578Q96N58 590 aaPredicted RBP7.12□□□□□ -1.27
CKS1B-205ENST00000473344 NT5C1BQ96P26 610 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 DEPDC7Q96QD5 511 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 EVA1BQ9NVM1 165 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.12□□□□□ -1.27
CKS1B-205ENST00000473344 ARHGAP20Q9P2F6 1191 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 CYTH4Q9UIA0 394 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 WASF2Q9Y6W5 498 aa7.12□□□□□ -1.27
CKS1B-205ENST00000473344 NEMP2A6NFY4 417 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 VGLL3A8MV65 326 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 KCNU1A8MYU2 1149 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 J3QKU1 62 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 FFAR2O15552 330 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 RNGTTO60942 597 aaKnown RBP7.11□□□□□ -1.27
CKS1B-205ENST00000473344 USP12O75317 370 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 ZNF202O95125 648 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 MPOP05164 745 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 FYNP06241 537 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 THEGLP0DJG4 465 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 VAV1P15498 845 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 PDGFRAP16234 1089 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 DGKAP23743 735 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 PRCPP42785 496 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 ACADSBP45954 432 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 FMO5P49326 533 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 MCCD1P59942 119 aaPredicted RBP7.11□□□□□ -1.27
CKS1B-205ENST00000473344 YWHAZP63104 245 aaKnown RBP7.11□□□□□ -1.27
CKS1B-205ENST00000473344 TUBB4BP68371 445 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 GABREP78334 506 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 SKOR1P84550 965 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 RHDQ02161 417 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 LRRC63Q05C16 580 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 KCNMA1Q12791 1236 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 POM121L1PQ3SYA9 428 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 ZC3H12AQ5D1E8 599 aaKnown RBP7.11□□□□□ -1.27
CKS1B-205ENST00000473344 ARHGAP40Q5TG30 622 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 ICE2Q659A1 982 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 BEND5Q7L4P6 421 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 TMC6Q7Z403 805 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 TAC4Q86UU9 113 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 RETREG3Q86VR2 466 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms