RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 CD320Q9NPF0 282 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 INTS6Q9UL03 887 aaKnown RBP17.2■□□□□ 0.34
CCM2-205ENST00000472223 ERVW-1Q9UQF0 538 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 STARD13Q9Y3M8 1113 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 FARP1Q9Y4F1 1045 aaPredicted RBP17.2■□□□□ 0.34
CCM2-205ENST00000472223 COL4A2P08572 1712 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 SHROOM3Q8TF72 1996 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 PRRT4C9JH25 899 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 CCDC188H7C350 402 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 SNAP91O60641 907 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 MAFKO60675 156 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 CD72P21854 359 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 STIP1P31948 543 aaKnown RBP17.19■□□□□ 0.34
CCM2-205ENST00000472223 RECQLP46063 649 aaPredicted RBP17.19■□□□□ 0.34
CCM2-205ENST00000472223 SEC13P55735 322 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 MRPS21P82921 87 aaKnown RBP17.19■□□□□ 0.34
CCM2-205ENST00000472223 SNX1Q13596 522 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 ZNF235Q14590 738 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 FSTL4Q6MZW2 842 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 SERPINA13PQ6UXR4 307 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 CHPFQ8IZ52 775 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 SYNPOQ8N3V7 929 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 ZNF513Q8N8E2 541 aaPredicted RBP17.19■□□□□ 0.34
CCM2-205ENST00000472223 KDM1BQ8NB78 822 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 GRK7Q8WTQ7 553 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 CCDC114Q96M63 670 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 OLFM3Q96PB7 478 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 VAT1Q99536 393 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 LGMNQ99538 433 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 HERPUD2Q9BSE4 406 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 CINPQ9BW66 212 aaPredicted RBP17.19■□□□□ 0.34
CCM2-205ENST00000472223 SEPT10Q9P0V9 454 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 SEPT3Q9UH03 358 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 SUN2Q9UH99 717 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 CHD5Q8TDI0 1954 aa17.19■□□□□ 0.34
CCM2-205ENST00000472223 FAM170BA6NMN3 283 aa17.18■□□□□ 0.34
CCM2-205ENST00000472223 J3KR12 359 aa17.18■□□□□ 0.34
CCM2-205ENST00000472223 FANCGO15287 622 aa17.18■□□□□ 0.34
CCM2-205ENST00000472223 LIASO43766 372 aa17.18■□□□□ 0.34
CCM2-205ENST00000472223 ATG13O75143 517 aa17.18■□□□□ 0.34
CCM2-205ENST00000472223 EGFP01133 1207 aa17.18■□□□□ 0.34
CCM2-205ENST00000472223 CCNB1P14635 433 aa17.18■□□□□ 0.34
CCM2-205ENST00000472223 GLDCP23378 1020 aa17.18■□□□□ 0.34
CCM2-205ENST00000472223 TIE1P35590 1138 aa17.18■□□□□ 0.34
CCM2-205ENST00000472223 SERPINH1P50454 418 aaKnown RBP17.18■□□□□ 0.34
CCM2-205ENST00000472223 HNRNPDQ14103 355 aaKnown RBP17.18■□□□□ 0.34
CCM2-205ENST00000472223 LBRQ14739 615 aaKnown RBP17.18■□□□□ 0.34
CCM2-205ENST00000472223 HSF5Q4G112 596 aaPredicted RBP17.18■□□□□ 0.34
CCM2-205ENST00000472223 NAIF1Q69YI7 327 aaPredicted RBP17.18■□□□□ 0.34
CCM2-205ENST00000472223 DRICH1Q6PGQ1 229 aaPredicted RBP17.18■□□□□ 0.34
CCM2-205ENST00000472223 LINGO4Q6UY18 593 aa17.18■□□□□ 0.34
CCM2-205ENST00000472223 CCDC105Q8IYK2 499 aa17.18■□□□□ 0.34
CCM2-205ENST00000472223 CYB5D2Q8WUJ1 264 aa17.18■□□□□ 0.34
CCM2-205ENST00000472223 HTR3CQ8WXA8 447 aa17.18■□□□□ 0.34
CCM2-205ENST00000472223 FATE1Q969F0 183 aa17.18■□□□□ 0.34
CCM2-205ENST00000472223 RPL10LQ96L21 214 aaKnown RBP17.18■□□□□ 0.34
CCM2-205ENST00000472223 QKIQ96PU8 341 aaKnown RBP eCLIP17.18■□□□□ 0.34
CCM2-205ENST00000472223 FAM118BQ9BPY3 351 aa17.18■□□□□ 0.34
CCM2-205ENST00000472223 FBRSL1Q9HCM7 1045 aaKnown RBP17.18■□□□□ 0.34
CCM2-205ENST00000472223 DRG1Q9Y295 367 aaKnown RBP17.18■□□□□ 0.34
CCM2-205ENST00000472223 R3HDM2Q9Y2K5 976 aaKnown RBP17.18■□□□□ 0.34
CCM2-205ENST00000472223 BCLAF3A2AJT9 711 aaKnown RBP17.17■□□□□ 0.34
CCM2-205ENST00000472223 KRBA1A5PL33 1030 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 K7EQS6 105 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 SGK1O00141 431 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 KCNN4O15554 427 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 ZBTB24O43167 697 aaPredicted RBP17.17■□□□□ 0.34
CCM2-205ENST00000472223 SYNCRIPO60506 623 aaKnown RBP17.17■□□□□ 0.34
CCM2-205ENST00000472223 ZMPSTE24O75844 475 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 HNRNPLP14866 589 aaKnown RBP eCLIP17.17■□□□□ 0.34
CCM2-205ENST00000472223 CHRNA3P32297 505 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 HSPA9P38646 679 aaKnown RBP17.17■□□□□ 0.34
CCM2-205ENST00000472223 CTSOP43234 321 aaPredicted RBP17.17■□□□□ 0.34
CCM2-205ENST00000472223 MMP13P45452 471 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 VASPP50552 380 aaPredicted RBP17.17■□□□□ 0.34
CCM2-205ENST00000472223 RHOAP61586 193 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 ARF5P84085 180 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 ITKQ08881 620 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 PRKD1Q15139 912 aaPredicted RBP17.17■□□□□ 0.34
CCM2-205ENST00000472223 C2orf27AQ580R0 203 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 IER5LQ5T953 404 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 TMEM215Q68D42 235 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 LEKR1Q6ZMV7 388 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 ARHGAP36Q6ZRI8 547 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 TP53INP2Q8IXH6 220 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 SH2D3CQ8N5H7 860 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 CEP112Q8N8E3 955 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 CCDC89Q8N998 374 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 ATL2Q8NHH9 583 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 SORCS1Q8WY21 1168 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 ATG4AQ8WYN0 398 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 NKD2Q969F2 451 aaPredicted RBP17.17■□□□□ 0.34
CCM2-205ENST00000472223 OSBPL6Q9BZF3 934 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 CEP44Q9C0F1 390 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 TBC1D17Q9HA65 648 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 LMAN1LQ9HAT1 526 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 LTB4R2Q9NPC1 389 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 RBM22Q9NW64 420 aaKnown RBP eCLIP17.17■□□□□ 0.34
CCM2-205ENST00000472223 THAP10Q9P2Z0 257 aaPredicted RBP17.17■□□□□ 0.34
CCM2-205ENST00000472223 AMACRQ9UHK6 382 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms