RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 NPIPB13A6NJU9 1138 aa4.11□□□□□ -1.75
RBM39-228ENST00000471635 NPIPB5A8MRT5 1133 aa4.11□□□□□ -1.75
RBM39-228ENST00000471635 SMTNL1A8MU46 457 aa4.11□□□□□ -1.75
RBM39-228ENST00000471635 LGALS16A8MUM7 142 aa4.11□□□□□ -1.75
RBM39-228ENST00000471635 NPIPB4C9JG80 1138 aa4.11□□□□□ -1.75
RBM39-228ENST00000471635 CAND2O75155 1236 aa4.11□□□□□ -1.75
RBM39-228ENST00000471635 HLA-DQA2P01906 255 aa4.11□□□□□ -1.75
RBM39-228ENST00000471635 LYL1P12980 280 aa4.11□□□□□ -1.75
RBM39-228ENST00000471635 THPOP40225 353 aa4.11□□□□□ -1.75
RBM39-228ENST00000471635 ERVFC1-1P60608 527 aa4.11□□□□□ -1.75
RBM39-228ENST00000471635 KIF5AQ12840 1032 aa4.11□□□□□ -1.75
RBM39-228ENST00000471635 PKP1Q13835 747 aa4.11□□□□□ -1.75
RBM39-228ENST00000471635 RPS6KA2Q15349 733 aa4.11□□□□□ -1.75
RBM39-228ENST00000471635 ZACNQ401N2 412 aa4.11□□□□□ -1.75
RBM39-228ENST00000471635 C8orf82Q6P1X6 216 aaPredicted RBP4.11□□□□□ -1.75
RBM39-228ENST00000471635 CLIP4Q8N3C7 705 aa4.11□□□□□ -1.75
RBM39-228ENST00000471635 MIGA1Q8NAN2 632 aa4.11□□□□□ -1.75
RBM39-228ENST00000471635 WFIKKN2Q8TEU8 576 aa4.11□□□□□ -1.75
RBM39-228ENST00000471635 RSC1A1Q92681 617 aa4.11□□□□□ -1.75
RBM39-228ENST00000471635 ZNF333Q96JL9 665 aa4.11□□□□□ -1.75
RBM39-228ENST00000471635 NPAS1Q99742 590 aa4.11□□□□□ -1.75
RBM39-228ENST00000471635 ELAC1Q9H777 363 aaKnown RBP4.11□□□□□ -1.75
RBM39-228ENST00000471635 ARFGAP3Q9NP61 516 aa4.11□□□□□ -1.75
RBM39-228ENST00000471635 DAPP1Q9UN19 280 aa4.11□□□□□ -1.75
RBM39-228ENST00000471635 RCE1Q9Y256 329 aa4.11□□□□□ -1.75
RBM39-228ENST00000471635 A0A0A0MQY5 61 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 A0A1B0GUV1 79 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 EFCAB8A8MWE9 144 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 FFAR2O15552 330 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 ASAP2O43150 1006 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 GRID2O43424 1007 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 LDB3O75112 727 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 MYL1P05976 194 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 FCGR2AP12318 317 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 GNLYP22749 145 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 NUDT6P53370 316 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 CDH12P55289 794 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 SEC61A1P61619 476 aaKnown RBP4.1□□□□□ -1.75
RBM39-228ENST00000471635 BTKQ06187 659 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 COASYQ13057 564 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 ALKBH1Q13686 389 aaKnown RBP4.1□□□□□ -1.75
RBM39-228ENST00000471635 PTK2BQ14289 1009 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 HLFQ16534 295 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 TBRG1Q3YBR2 411 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 GALNTL6Q49A17 601 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 GXYLT1Q4G148 440 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 GFI1BQ5VTD9 330 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 NFRKBQ6P4R8 1299 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 SPSB3Q6PJ21 355 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 ZNF329Q86UD4 541 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 C2CD4CQ8TF44 421 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 SLC35F5Q8WV83 523 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 NR4A3Q92570 626 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 RTP4Q96DX8 246 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 KATNAL1Q9BW62 490 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 IFT27Q9BW83 186 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 C1QTNF4Q9BXJ3 329 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 ZNF556Q9HAH1 456 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 ARNT2Q9HBZ2 717 aa4.1□□□□□ -1.75
RBM39-228ENST00000471635 PLSCR5A0PG75 271 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 DENND3A2RUS2 1198 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 HSPB6O14558 160 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 SYN3O14994 580 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 ACTL6BO94805 426 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 DDNO94850 711 aaPredicted RBP4.09□□□□□ -1.75
RBM39-228ENST00000471635 ITGA2BP08514 1039 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 ZNF12P17014 697 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 NAGAP17050 411 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 PRKCHP24723 683 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 AMTP48728 403 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 EEF1A2Q05639 463 aaKnown RBP4.09□□□□□ -1.75
RBM39-228ENST00000471635 TRAF2Q12933 501 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 TRAF3Q13114 568 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 SYTL3Q4VX76 610 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 XRRA1Q6P2D8 792 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 GSG1LQ6UXU4 331 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 SYNE3Q6ZMZ3 975 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 H1FNTQ75WM6 255 aaPredicted RBP4.09□□□□□ -1.75
RBM39-228ENST00000471635 RAB11FIP2Q7L804 512 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 SCN4BQ8IWT1 228 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 ZNF527Q8NB42 609 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 SCAMP5Q8TAC9 235 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 SLC2A12Q8TD20 617 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 FAR1Q8WVX9 515 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 ARRDC3Q96B67 414 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 FRG2BQ96QU4 278 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 GFM1Q96RP9 751 aaKnown RBP4.09□□□□□ -1.75
RBM39-228ENST00000471635 PIGSQ96S52 555 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 CLPBQ9H078 707 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.09□□□□□ -1.751e-15■□□□□ 10.2
RBM39-228ENST00000471635 ACAD9Q9H845 621 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 NLRC4Q9NPP4 1024 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 GEMIN8Q9NWZ8 242 aaKnown RBP4.09□□□□□ -1.75
RBM39-228ENST00000471635 OCIAD1Q9NX40 245 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 IL36RNQ9UBH0 155 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 C19orf53Q9UNZ5 99 aaPredicted RBP4.09□□□□□ -1.75
RBM39-228ENST00000471635 SRPRBQ9Y5M8 271 aaKnown RBP4.09□□□□□ -1.75
RBM39-228ENST00000471635 RAI2Q9Y5P3 530 aa4.09□□□□□ -1.75
RBM39-228ENST00000471635 LINC01565O15544 149 aa4.08□□□□□ -1.76
RBM39-228ENST00000471635 KCNJ13O60928 360 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms