RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 MRPS25P82663 173 aaKnown RBP11.48□□□□□ -0.57
SREBF1-209ENST00000470247 PFKPQ01813 784 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 KDSRQ06136 332 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 SLC10A7Q0GE19 358 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 AP1B1Q10567 949 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 ZBTB17Q13105 803 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 HNRNPDQ14103 355 aaKnown RBP11.48□□□□□ -0.57
SREBF1-209ENST00000470247 CYTH1Q15438 398 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 PTPRNQ16849 979 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 LINGO4Q6UY18 593 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 LEKR1Q6ZMV7 388 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 CTAGE6Q86UF2 777 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 RALGPS2Q86X27 583 aaPredicted RBP11.48□□□□□ -0.57
SREBF1-209ENST00000470247 CDKL3Q8IVW4 592 aaPredicted RBP11.48□□□□□ -0.57
SREBF1-209ENST00000470247 CCDC117Q8IWD4 279 aaPredicted RBP11.48□□□□□ -0.57
SREBF1-209ENST00000470247 CTAGE4Q8IX94 777 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 AHI1Q8N157 1196 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 FAM71DQ8N9W8 422 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 MNS1Q8NEH6 495 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 HTR3CQ8WXA8 447 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 SORCS1Q8WY21 1168 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 ACDQ96AP0 544 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 ZNF599Q96NL3 588 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 NECAB3Q96P71 396 aaPredicted RBP11.48□□□□□ -0.57
SREBF1-209ENST00000470247 ELOVL2Q9NXB9 296 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 AMACRQ9UHK6 382 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 SORCS3Q9UPU3 1222 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 ZNF148Q9UQR1 794 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 PIAS3Q9Y6X2 628 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 MYO18AQ92614 2054 aaKnown RBP11.47□□□□□ -0.57
SREBF1-209ENST00000470247 C5orf60A6NFR6 353 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.47□□□□□ -0.57
SREBF1-209ENST00000470247 BHMG1C9JSJ3 638 aaPredicted RBP11.47□□□□□ -0.57
SREBF1-209ENST00000470247 K7EQS6 105 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 K7ERQ8 282 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 MUSKO15146 869 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 KCNN4O15554 427 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 RAD51CO43502 376 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 SMAD6O43541 496 aaKnown RBP11.47□□□□□ -0.57
SREBF1-209ENST00000470247 TIMM44O43615 452 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 GCATO75600 419 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 JCHAINP01591 159 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 ZSCAN5DPP0CG00 497 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 CCNB1P14635 433 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 GRIA2P42262 883 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 STK19P49842 368 aaPredicted RBP11.47□□□□□ -0.57
SREBF1-209ENST00000470247 SLC20A2Q08357 652 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 IHHQ14623 411 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 TEX44Q53QW1 395 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 TMEM196Q5HYL7 178 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 EMC10Q5UCC4 262 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 FSTL4Q6MZW2 842 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 TIGD7Q6NT04 549 aaPredicted RBP11.47□□□□□ -0.57
SREBF1-209ENST00000470247 CCDC105Q8IYK2 499 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 GJD3Q8N144 294 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 ZNF567Q8N184 647 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 ZNF687Q8N1G0 1237 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 PGBD5Q8N414 524 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 CYB5D2Q8WUJ1 264 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 VOPP1Q96AW1 172 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 TEKT5Q96M29 485 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 NSMCE3Q96MG7 304 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 P2RY13Q9BPV8 354 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 C2orf49Q9BVC5 232 aaPredicted RBP11.47□□□□□ -0.57
SREBF1-209ENST00000470247 SP110Q9HB58 689 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 UBA2Q9UBT2 640 aaPredicted RBP11.47□□□□□ -0.57
SREBF1-209ENST00000470247 SLCO3A1Q9UIG8 710 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 HPCAL4Q9UM19 191 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 ERVW-1Q9UQF0 538 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 HS3ST2Q9Y278 367 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 STARD13Q9Y3M8 1113 aa11.47□□□□□ -0.57
SREBF1-209ENST00000470247 CFAP69A5D8W1 941 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 KRBA1A5PL33 1030 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 TBC1D3BA6NDS4 549 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 ZSCAN5CA6NGD5 496 aaPredicted RBP11.46□□□□□ -0.57
SREBF1-209ENST00000470247 RNF103O00237 685 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 RIOK3O14730 519 aaKnown RBP11.46□□□□□ -0.57
SREBF1-209ENST00000470247 TTI1O43156 1089 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 ATP9BO43861 1147 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 APODP05090 189 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 DLDP09622 509 aaKnown RBP11.46□□□□□ -0.57
SREBF1-209ENST00000470247 SRCP12931 536 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 POLR2EP19388 210 aaKnown RBP11.46□□□□□ -0.57
SREBF1-209ENST00000470247 IVDP26440 423 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 RPL22P35268 128 aaKnown RBP11.46□□□□□ -0.57
SREBF1-209ENST00000470247 KIR2DL1P43626 348 aaPredicted RBP11.46□□□□□ -0.57
SREBF1-209ENST00000470247 RGRP47804 291 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 SERPINH1P50454 418 aaKnown RBP11.46□□□□□ -0.57
SREBF1-209ENST00000470247 ECT2LQ008S8 904 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 SULT2A1Q06520 285 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 LBRQ14739 615 aaKnown RBP11.46□□□□□ -0.57
SREBF1-209ENST00000470247 PON2Q15165 354 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 INO80DQ53TQ3 878 aaPredicted RBP11.46□□□□□ -0.57
SREBF1-209ENST00000470247 DGKKQ5KSL6 1271 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 ANKRD20A2Q5SQ80 823 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 TMCO4Q5TGY1 634 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 ANKRD20A1Q5TYW2 823 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 ANKRD20A3Q5VUR7 823 aa11.46□□□□□ -0.57
SREBF1-209ENST00000470247 HEATR6Q6AI08 1181 aaKnown RBP11.46□□□□□ -0.57
SREBF1-209ENST00000470247 ZNF354CQ86Y25 554 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms