RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 MRGPRX3Q96LB0 322 aa11.51□□□□□ -0.57
MSH5-214ENST00000468602 QKIQ96PU8 341 aaKnown RBP eCLIP11.51□□□□□ -0.57
MSH5-214ENST00000468602 PSKH2Q96QS6 385 aa11.51□□□□□ -0.57
MSH5-214ENST00000468602 UHRF1Q96T88 793 aaPredicted RBP11.51□□□□□ -0.57
MSH5-214ENST00000468602 IL12RB2Q99665 862 aa11.51□□□□□ -0.57
MSH5-214ENST00000468602 HEMGNQ9BXL5 484 aa11.51□□□□□ -0.57
MSH5-214ENST00000468602 TMEM245Q9H330 911 aa11.51□□□□□ -0.57
MSH5-214ENST00000468602 L2HGDHQ9H9P8 463 aa11.51□□□□□ -0.57
MSH5-214ENST00000468602 USP29Q9HBJ7 922 aa11.51□□□□□ -0.57
MSH5-214ENST00000468602 FBRSL1Q9HCM7 1045 aaKnown RBP11.51□□□□□ -0.57
MSH5-214ENST00000468602 IPO11Q9UI26 975 aaKnown RBP11.51□□□□□ -0.57
MSH5-214ENST00000468602 VPS51Q9UID3 782 aa11.51□□□□□ -0.57
MSH5-214ENST00000468602 VPS28Q9UK41 221 aa11.51□□□□□ -0.57
MSH5-214ENST00000468602 HCN2Q9UL51 889 aa11.51□□□□□ -0.57
MSH5-214ENST00000468602 MFHAS1Q9Y4C4 1052 aa11.51□□□□□ -0.57
MSH5-214ENST00000468602 MRFAP1Q9Y605 127 aa11.51□□□□□ -0.57
MSH5-214ENST00000468602 TECTAO75443 2155 aa11.51□□□□□ -0.57
MSH5-214ENST00000468602 CKAP5Q14008 2032 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 TCRBV7S2A1N4TA0A589 114 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 DCXO43602 365 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 LIASO43766 372 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 CHRNB1P11230 501 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 ALADP13716 330 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 POLR2EP19388 210 aaKnown RBP11.5□□□□□ -0.57
MSH5-214ENST00000468602 CES1P23141 567 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 ACVRL1P37023 503 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 SOX9P48436 509 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 SERPINH1P50454 418 aaKnown RBP11.5□□□□□ -0.57
MSH5-214ENST00000468602 ECT2LQ008S8 904 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 LONRF2Q1L5Z9 754 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 IER5LQ5T953 404 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 KAZNQ674X7 775 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 TPRG1Q6ZUI0 275 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 BMP8AQ7Z5Y6 402 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 SH2D3CQ8N5H7 860 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 NAT16Q8N8M0 369 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 OR7D4Q8NG98 312 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 RUNDC3BQ96NL0 473 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 GABRG3Q99928 467 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 MUC3BQ9H195 1237 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 FBRSQ9HAH7 460 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 CD248Q9HCU0 757 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 ATP13A1Q9HD20 1204 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 LTB4R2Q9NPC1 389 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 PCYOX1Q9UHG3 505 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 FEZ2Q9UHY8 353 aaPredicted RBP11.5□□□□□ -0.57
MSH5-214ENST00000468602 HPCAL4Q9UM19 191 aa11.5□□□□□ -0.57
MSH5-214ENST00000468602 TARSL2A2RTX5 802 aaKnown RBP11.49□□□□□ -0.57
MSH5-214ENST00000468602 TBC1D3BA6NDS4 549 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 C5orf60A6NFR6 353 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 WASH3PC4AMC7 463 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 MCF2LO15068 1137 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 TRIM24O15164 1050 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 ZNF185O15231 689 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 ZNF821O75541 412 aaPredicted RBP11.49□□□□□ -0.57
MSH5-214ENST00000468602 RBP3P10745 1247 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 CR2P20023 1033 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 CHRNA3P32297 505 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 PAFAH1B1P43034 410 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 RENBPP51606 427 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 LMNB2Q03252 620 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 BYSLQ13895 437 aaKnown RBP11.49□□□□□ -0.57
MSH5-214ENST00000468602 NPNTQ6UXI9 565 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 C4orf22Q6V702 233 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 TRMT11Q7Z4G4 463 aaKnown RBP11.49□□□□□ -0.57
MSH5-214ENST00000468602 CDKL3Q8IVW4 592 aaPredicted RBP11.49□□□□□ -0.57
MSH5-214ENST00000468602 TP53INP2Q8IXH6 220 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 CCDC13Q8IYE1 715 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 ATPAF2Q8N5M1 289 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 TTC16Q8NEE8 873 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 USP33Q8TEY7 942 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 FRS2Q8WU20 508 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 TFB1MQ8WVM0 346 aaKnown RBP11.49□□□□□ -0.57
MSH5-214ENST00000468602 CELF6Q96J87 481 aaKnown RBP11.49□□□□□ -0.57
MSH5-214ENST00000468602 MUTYHQ9UIF7 546 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 TRHDEQ9UKU6 1024 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 ERVW-1Q9UQF0 538 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 R3HDM2Q9Y2K5 976 aaKnown RBP11.49□□□□□ -0.57
MSH5-214ENST00000468602 ATP8A1Q9Y2Q0 1164 aa11.49□□□□□ -0.57
MSH5-214ENST00000468602 GOLGA6L10A0A0M3HER8 536 aa11.48□□□□□ -0.57
MSH5-214ENST00000468602 PDE2AO00408 941 aaPredicted RBP11.48□□□□□ -0.57
MSH5-214ENST00000468602 ALOX15BO15296 676 aa11.48□□□□□ -0.57
MSH5-214ENST00000468602 PHF2O75151 1096 aa11.48□□□□□ -0.57
MSH5-214ENST00000468602 GCATO75600 419 aa11.48□□□□□ -0.57
MSH5-214ENST00000468602 PAPSS2O95340 614 aaPredicted RBP11.48□□□□□ -0.57
MSH5-214ENST00000468602 GSRP00390 522 aa11.48□□□□□ -0.57
MSH5-214ENST00000468602 SRCP12931 536 aa11.48□□□□□ -0.57
MSH5-214ENST00000468602 EIF3EP60228 445 aaKnown RBP11.48□□□□□ -0.57
MSH5-214ENST00000468602 CKAP4Q07065 602 aaKnown RBP11.48□□□□□ -0.57
MSH5-214ENST00000468602 WASHC5Q12768 1159 aa11.48□□□□□ -0.57
MSH5-214ENST00000468602 LRRC32Q14392 662 aa11.48□□□□□ -0.57
MSH5-214ENST00000468602 PON2Q15165 354 aa11.48□□□□□ -0.57
MSH5-214ENST00000468602 P3H1Q32P28 736 aa11.48□□□□□ -0.57
MSH5-214ENST00000468602 HNRNPA1L2Q32P51 320 aaKnown RBP11.48□□□□□ -0.57
MSH5-214ENST00000468602 TEX44Q53QW1 395 aa11.48□□□□□ -0.57
MSH5-214ENST00000468602 NAIF1Q69YI7 327 aaPredicted RBP11.48□□□□□ -0.57
MSH5-214ENST00000468602 IL31Q6EBC2 164 aa11.48□□□□□ -0.57
MSH5-214ENST00000468602 TRIM67Q6ZTA4 783 aa11.48□□□□□ -0.57
MSH5-214ENST00000468602 PCDH20Q8N6Y1 951 aaKnown RBP11.48□□□□□ -0.57
MSH5-214ENST00000468602 ATL2Q8NHH9 583 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms