RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 CDC6Q99741 560 aa11.35□□□□□ -0.59
PRPF3-203ENST00000467514 NCAPGQ9BPX3 1015 aa11.35□□□□□ -0.59
PRPF3-203ENST00000467514 AP1M1Q9BXS5 423 aa11.35□□□□□ -0.59
PRPF3-203ENST00000467514 GAREM1Q9H706 876 aa11.35□□□□□ -0.59
PRPF3-203ENST00000467514 TM7SF3Q9NS93 570 aa11.35□□□□□ -0.59
PRPF3-203ENST00000467514 DDX56Q9NY93 547 aaKnown RBP11.35□□□□□ -0.59
PRPF3-203ENST00000467514 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.35□□□□□ -0.59
PRPF3-203ENST00000467514 RAB21Q9UL25 225 aa11.35□□□□□ -0.59
PRPF3-203ENST00000467514 ASXL3Q9C0F0 2248 aa11.35□□□□□ -0.59
PRPF3-203ENST00000467514 FAM92AA1XBS5 289 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 FAM149AA5PLN7 773 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 YJEFN3A6XGL0 299 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 E7ENQ6 273 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 FLRT2O43155 660 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 GJB3O75712 270 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 RNF8O76064 485 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 KRT7P08729 469 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 RARAP10276 462 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 IRF1P10914 325 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 H2AFXP16104 143 aaPredicted RBP11.34□□□□□ -0.59
PRPF3-203ENST00000467514 SDC4P31431 198 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 NOS2P35228 1153 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 CDKN2BP42772 138 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 PPP3CCP48454 512 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 SLC7A9P82251 487 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 ZXDBP98169 803 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 STARD3Q14849 445 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 SUZ12Q15022 739 aaKnown RBP11.34□□□□□ -0.59
PRPF3-203ENST00000467514 PPP2R5EQ16537 467 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 SLC25A52Q3SY17 297 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 GLE1Q53GS7 698 aaKnown RBP11.34□□□□□ -0.59
PRPF3-203ENST00000467514 SEL1L2Q5TEA6 688 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 GRAMD4Q6IC98 578 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 IL27RAQ6UWB1 636 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 MFSD7Q6UXD7 560 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 STRADAQ7RTN6 431 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 GLRX5Q86SX6 157 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 MARCH9Q86YJ5 346 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 DEFB106AQ8N104 65 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 PDCD7Q8N8D1 485 aaKnown RBP11.34□□□□□ -0.59
PRPF3-203ENST00000467514 TERB1Q8NA31 727 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 FAM71BQ8TC56 605 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 KCNV2Q8TDN2 545 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 FAM172AQ8WUF8 416 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 TEKT4Q8WW24 435 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 RBM41Q96IZ5 413 aaKnown RBP11.34□□□□□ -0.59
PRPF3-203ENST00000467514 SPATA17Q96L03 361 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 PARD6BQ9BYG5 372 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 DNAJC17Q9NVM6 304 aaKnown RBP11.34□□□□□ -0.59
PRPF3-203ENST00000467514 KIAA1522Q9P206 1035 aaPredicted RBP11.34□□□□□ -0.59
PRPF3-203ENST00000467514 DKK4Q9UBT3 224 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 EFR3BQ9Y2G0 817 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 KALRNO60229 2985 aa11.34□□□□□ -0.59
PRPF3-203ENST00000467514 MAST4O15021 2626 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 hCG_1818297A0A087WSY0 165 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 TK2O00142 265 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 RRP8O43159 456 aaKnown RBP11.33□□□□□ -0.6
PRPF3-203ENST00000467514 TULP3O75386 442 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 LTFP02788 710 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 KRT1P04264 644 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 ATXN1LP0C7T5 689 aaKnown RBP11.33□□□□□ -0.6
PRPF3-203ENST00000467514 RALAP11233 206 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 NCAM1P13591 858 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 HLA-EP13747 358 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 CD6P30203 668 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 SLC5A3P53794 718 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 USP46P62068 366 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 PITX1P78337 314 aaPredicted RBP11.33□□□□□ -0.6
PRPF3-203ENST00000467514 HADHQ16836 314 aaKnown RBP11.33□□□□□ -0.6
PRPF3-203ENST00000467514 SYPL2Q5VXT5 272 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 EGFLAMQ63HQ2 1017 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 WDR93Q6P2C0 686 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 SPOCD1Q6ZMY3 1216 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 SCD5Q86SK9 330 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 KIAA1958Q8N8K9 716 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 RNF25Q96BH1 459 aaPredicted RBP11.33□□□□□ -0.6
PRPF3-203ENST00000467514 OTUB2Q96DC9 234 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 PGAP3Q96FM1 320 aaPredicted RBP11.33□□□□□ -0.6
PRPF3-203ENST00000467514 XPO6Q96QU8 1125 aaKnown RBP11.33□□□□□ -0.6
PRPF3-203ENST00000467514 TBCBQ99426 244 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 KRT12Q99456 494 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 LRRC1Q9BTT6 524 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 GPR174Q9BXC1 333 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 OSBPL8Q9BZF1 889 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 RNF38Q9H0F5 515 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 SLC6A17Q9H1V8 727 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 POPDC2Q9HBU9 364 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.33□□□□□ -0.6
PRPF3-203ENST00000467514 DMGDHQ9UI17 866 aaKnown RBP11.33□□□□□ -0.6
PRPF3-203ENST00000467514 RAD54BQ9Y620 910 aa11.33□□□□□ -0.6
PRPF3-203ENST00000467514 A0A087WV48 116 aa11.32□□□□□ -0.6
PRPF3-203ENST00000467514 E2F8A0AVK6 867 aa11.32□□□□□ -0.6
PRPF3-203ENST00000467514 ZNF840PA6NDX5 716 aa11.32□□□□□ -0.6
PRPF3-203ENST00000467514 ZNF487B1APH4 448 aa11.32□□□□□ -0.6
PRPF3-203ENST00000467514 NEDD8-MDP1E9PL57 170 aa11.32□□□□□ -0.6
PRPF3-203ENST00000467514 MDM4O15151 490 aa11.32□□□□□ -0.6
PRPF3-203ENST00000467514 IGLV3-25P01717 112 aa11.32□□□□□ -0.6
PRPF3-203ENST00000467514 TUBBP07437 444 aa11.32□□□□□ -0.6
PRPF3-203ENST00000467514 RHOXF2BP0C7M4 288 aa11.32□□□□□ -0.6
PRPF3-203ENST00000467514 PLA2G2AP14555 144 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms