RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 CYP4F11Q9HBI6 524 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 RBM22Q9NW64 420 aaKnown RBP eCLIP18.61■□□□□ 0.57
COL9A3-205ENST00000466192 BFARQ9NZS9 450 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 RPS6KL1Q9Y6S9 549 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 ZNF840PA6NDX5 716 aa18.6■□□□□ 0.57
COL9A3-205ENST00000466192 HGSO14964 777 aaPredicted RBP18.6■□□□□ 0.57
COL9A3-205ENST00000466192 GJB5O95377 273 aa18.6■□□□□ 0.57
COL9A3-205ENST00000466192 PEX11BO96011 259 aa18.6■□□□□ 0.57
COL9A3-205ENST00000466192 MT-CYBP00156 380 aaPredicted RBP18.6■□□□□ 0.57
COL9A3-205ENST00000466192 POLBP06746 335 aa18.6■□□□□ 0.57
COL9A3-205ENST00000466192 ATP5C1P36542 298 aaKnown RBP18.6■□□□□ 0.57
COL9A3-205ENST00000466192 SNX30Q5VWJ9 437 aa18.6■□□□□ 0.57
COL9A3-205ENST00000466192 TPGS2Q68CL5 300 aa18.6■□□□□ 0.57
COL9A3-205ENST00000466192 CIR1Q86X95 450 aaPredicted RBP18.6■□□□□ 0.57
COL9A3-205ENST00000466192 AUTS2Q8WXX7 1259 aa18.6■□□□□ 0.57
COL9A3-205ENST00000466192 MTBPQ96DY7 904 aa18.6■□□□□ 0.57
COL9A3-205ENST00000466192 DNMT3LQ9UJW3 386 aa18.6■□□□□ 0.57
COL9A3-205ENST00000466192 HBS1LQ9Y450 684 aaKnown RBP18.6■□□□□ 0.57
COL9A3-205ENST00000466192 KIAA0355O15063 1070 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 ALADP13716 330 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 RAG1P15918 1043 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 KPNA1P52294 538 aaPredicted RBP18.59■□□□□ 0.57
COL9A3-205ENST00000466192 MGAT5Q09328 741 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 MARK2Q7KZI7 788 aaKnown RBP18.59■□□□□ 0.57
COL9A3-205ENST00000466192 CHSY1Q86X52 802 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 CMTR2Q8IYT2 770 aaKnown RBP18.59■□□□□ 0.57
COL9A3-205ENST00000466192 PDZD8Q8NEN9 1154 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 CDKL2Q92772 493 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 PTPRN2Q92932 1015 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 RPRD1AQ96P16 312 aaPredicted RBP18.59■□□□□ 0.57
COL9A3-205ENST00000466192 MANSC1Q9H8J5 431 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 SPG21Q9NZD8 308 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 HSFX1Q9UBD0 423 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 AAR2Q9Y312 384 aaKnown RBP18.59■□□□□ 0.57
COL9A3-205ENST00000466192 YIPF1Q9Y548 306 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 J3KR12 359 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 DHRS4L1P0CG22 281 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 TPH1P17752 444 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 LAG3P18627 525 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 SERPINB9P50453 376 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 SPANXN3Q5MJ09 141 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 NAPEPLDQ6IQ20 393 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 OTOAQ7RTW8 1153 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 TMEM135Q86UB9 458 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 OVCA2Q8WZ82 227 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 CDK5RAP1Q96SZ6 601 aaKnown RBP18.59■□□□□ 0.57
COL9A3-205ENST00000466192 PLCD4Q9BRC7 762 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 PCMTD2Q9NV79 361 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 BPTFQ12830 3046 aa18.59■□□□□ 0.57
COL9A3-205ENST00000466192 ATP9BO43861 1147 aa18.58■□□□□ 0.57
COL9A3-205ENST00000466192 UBOX5O94941 541 aa18.58■□□□□ 0.57
COL9A3-205ENST00000466192 ERVK-10P10266 1014 aa18.58■□□□□ 0.57
COL9A3-205ENST00000466192 DNAJB2P25686 324 aa18.58■□□□□ 0.57
COL9A3-205ENST00000466192 NPY2RP49146 381 aa18.58■□□□□ 0.57
COL9A3-205ENST00000466192 DDX53Q86TM3 631 aaKnown RBP18.58■□□□□ 0.57
COL9A3-205ENST00000466192 ZNF669Q96BR6 464 aaPredicted RBP18.58■□□□□ 0.57
COL9A3-205ENST00000466192 MYRFLQ96LU7 910 aa18.58■□□□□ 0.57
COL9A3-205ENST00000466192 DONSONQ9NYP3 566 aa18.58■□□□□ 0.57
COL9A3-205ENST00000466192 PSAT1Q9Y617 370 aa18.58■□□□□ 0.57
COL9A3-205ENST00000466192 OBSL1O75147 1896 aa18.58■□□□□ 0.56
COL9A3-205ENST00000466192 PSMD3O43242 534 aa18.58■□□□□ 0.56
COL9A3-205ENST00000466192 COCHO43405 550 aa18.58■□□□□ 0.56
COL9A3-205ENST00000466192 ANXA9O76027 345 aa18.58■□□□□ 0.56
COL9A3-205ENST00000466192 NEFHP12036 1026 aa18.58■□□□□ 0.56
COL9A3-205ENST00000466192 TACR2P21452 398 aa18.58■□□□□ 0.56
COL9A3-205ENST00000466192 CDH17Q12864 832 aa18.58■□□□□ 0.56
COL9A3-205ENST00000466192 RAB33AQ14088 237 aa18.58■□□□□ 0.56
COL9A3-205ENST00000466192 ANO4Q32M45 955 aa18.58■□□□□ 0.56
COL9A3-205ENST00000466192 HECTD3Q5T447 861 aa18.58■□□□□ 0.56
COL9A3-205ENST00000466192 ACBD5Q5T8D3 534 aaPredicted RBP18.58■□□□□ 0.56
COL9A3-205ENST00000466192 NDUFAF2Q8N183 169 aa18.58■□□□□ 0.56
COL9A3-205ENST00000466192 FITM2Q8N6M3 262 aa18.58■□□□□ 0.56
COL9A3-205ENST00000466192 CERS2Q96G23 380 aa18.58■□□□□ 0.56
COL9A3-205ENST00000466192 NACA2Q9H009 215 aa18.58■□□□□ 0.56
COL9A3-205ENST00000466192 ZFATQ9P243 1243 aa18.58■□□□□ 0.56
COL9A3-205ENST00000466192 PLLPQ9Y342 182 aa18.58■□□□□ 0.56
COL9A3-205ENST00000466192 PLXNA4Q9HCM2 1894 aa18.58■□□□□ 0.56
COL9A3-205ENST00000466192 ZCWPW2A0A1B0GU75 182 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 URODP06132 367 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 SLC6A4P31645 630 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 ALDH1A3P47895 512 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 RNF43Q68DV7 783 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 PACS1Q6VY07 963 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 OTOP2Q7RTS6 562 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 LINC00523Q86TU6 105 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 RASSF3Q86WH2 238 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 SUGP1Q8IWZ8 645 aaKnown RBP18.57■□□□□ 0.56
COL9A3-205ENST00000466192 IPMKQ8NFU5 416 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 PSMG2Q969U7 264 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 MFSD3Q96ES6 412 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 IL22Q9GZX6 179 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 SLC12A4Q9UP95 1085 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 EFCAB14O75071 495 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 USP1O94782 785 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 CCNFP41002 786 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 SERPINB4P48594 390 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 SLC10A7Q0GE19 358 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 PLD1Q13393 1074 aa18.57■□□□□ 0.56
COL9A3-205ENST00000466192 HNRNPDQ14103 355 aaKnown RBP18.57■□□□□ 0.56
COL9A3-205ENST00000466192 ANKRD20A4Q4UJ75 823 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms