RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 VANGL2Q9ULK5 521 aa17.9■□□□□ 0.46
CPSF4-209ENST00000465132 CFAP47Q6ZTR5 3102 aa17.89■□□□□ 0.46
CPSF4-209ENST00000465132 FRYQ5TBA9 3013 aa17.89■□□□□ 0.45
CPSF4-209ENST00000465132 CHD6Q8TD26 2715 aa17.89■□□□□ 0.45
CPSF4-209ENST00000465132 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.89■□□□□ 0.45
CPSF4-209ENST00000465132 GRID2IPA4D2P6 1211 aa17.89■□□□□ 0.45
CPSF4-209ENST00000465132 TMEM8BA6NDV4 472 aa17.89■□□□□ 0.45
CPSF4-209ENST00000465132 ZNF487B1APH4 448 aa17.89■□□□□ 0.45
CPSF4-209ENST00000465132 WASH3PC4AMC7 463 aa17.89■□□□□ 0.45
CPSF4-209ENST00000465132 EEF2KO00418 725 aaKnown RBP17.89■□□□□ 0.45
CPSF4-209ENST00000465132 ARHGAP33O14559 1287 aa17.89■□□□□ 0.45
CPSF4-209ENST00000465132 OPHN1O60890 802 aa17.89■□□□□ 0.45
CPSF4-209ENST00000465132 PENKP01210 267 aaPredicted RBP17.89■□□□□ 0.45
CPSF4-209ENST00000465132 RARAP10276 462 aa17.89■□□□□ 0.45
CPSF4-209ENST00000465132 ETFBP38117 255 aa17.89■□□□□ 0.45
CPSF4-209ENST00000465132 SIM1P81133 766 aaPredicted RBP17.89■□□□□ 0.45
CPSF4-209ENST00000465132 ZNF177Q13360 481 aaPredicted RBP17.89■□□□□ 0.45
CPSF4-209ENST00000465132 SLC12A1Q13621 1099 aa17.89■□□□□ 0.45
CPSF4-209ENST00000465132 PPP6R3Q5H9R7 873 aaPredicted RBP17.89■□□□□ 0.45
CPSF4-209ENST00000465132 RWDD4Q6NW29 188 aaKnown RBP17.89■□□□□ 0.45
CPSF4-209ENST00000465132 FBXL22Q6P050 247 aa17.89■□□□□ 0.45
CPSF4-209ENST00000465132 RCOR2Q8IZ40 523 aa17.89■□□□□ 0.45
CPSF4-209ENST00000465132 MINDY1Q8N5J2 469 aa17.89■□□□□ 0.45
CPSF4-209ENST00000465132 ZNF419Q96HQ0 510 aaPredicted RBP17.89■□□□□ 0.45
CPSF4-209ENST00000465132 MAK16Q9BXY0 300 aaKnown RBP17.89■□□□□ 0.45
CPSF4-209ENST00000465132 TRMT1Q9NXH9 659 aaKnown RBP17.89■□□□□ 0.45
CPSF4-209ENST00000465132 SALL4Q9UJQ4 1053 aa17.89■□□□□ 0.45
CPSF4-209ENST00000465132 RALYQ9UKM9 306 aaKnown RBP17.89■□□□□ 0.45
CPSF4-209ENST00000465132 IGLV3-10A0A075B6K4 115 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 DRGXA6NNA5 263 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 H0Y626 953 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 HYAL3O43820 417 aaPredicted RBP17.88■□□□□ 0.45
CPSF4-209ENST00000465132 CREB3O43889 395 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 TBL1XO60907 577 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 ZRANB2O95218 330 aaKnown RBP eCLIP17.88■□□□□ 0.45
CPSF4-209ENST00000465132 TUBB4AP04350 444 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 RHOQP17081 205 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 CTNNA2P26232 953 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 EPHB2P29323 1055 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 CTNNA1P35221 906 aaKnown RBP17.88■□□□□ 0.45
CPSF4-209ENST00000465132 GJC1P36383 396 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 CDH6P55285 790 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 RWDD2BP57060 319 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 COPS2P61201 443 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 CDH18Q13634 790 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 C6orf118Q5T5N4 469 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 NADSYN1Q6IA69 706 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 RFWD3Q6PCD5 774 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 SETD3Q86TU7 594 aaPredicted RBP17.88■□□□□ 0.45
CPSF4-209ENST00000465132 REXO1L1PQ8IX06 675 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 KATNAL2Q8IYT4 538 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 OR2I1PQ8NGU4 316 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 ZNF670Q9BS34 389 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 CD93Q9NPY3 652 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 TRIM10Q9UDY6 481 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 SLC27A6Q9Y2P4 619 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 JRKLQ9Y4A0 524 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 NEUROG3Q9Y4Z2 214 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 PCDHA3Q9Y5H8 950 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 STON1Q9Y6Q2 735 aa17.88■□□□□ 0.45
CPSF4-209ENST00000465132 PI4KAP42356 2102 aa17.87■□□□□ 0.45
CPSF4-209ENST00000465132 GOLGA6L7A0A1B0GV03 622 aa17.87■□□□□ 0.45
CPSF4-209ENST00000465132 LRRD1A4D1F6 860 aa17.87■□□□□ 0.45
CPSF4-209ENST00000465132 TSPAN3O60637 253 aa17.87■□□□□ 0.45
CPSF4-209ENST00000465132 NDUFS2O75306 463 aa17.87■□□□□ 0.45
CPSF4-209ENST00000465132 SYPP08247 313 aa17.87■□□□□ 0.45
CPSF4-209ENST00000465132 ZFXP17010 805 aaPredicted RBP17.87■□□□□ 0.45
CPSF4-209ENST00000465132 SLC6A4P31645 630 aa17.87■□□□□ 0.45
CPSF4-209ENST00000465132 MAPKAPK2P49137 400 aa17.87■□□□□ 0.45
CPSF4-209ENST00000465132 RPS6KA1Q15418 735 aa17.87■□□□□ 0.45
CPSF4-209ENST00000465132 SMTNL2Q2TAL5 461 aa17.87■□□□□ 0.45
CPSF4-209ENST00000465132 KCNT1Q5JUK3 1230 aa17.87■□□□□ 0.45
CPSF4-209ENST00000465132 FYB2Q5VWT5 728 aa17.87■□□□□ 0.45
CPSF4-209ENST00000465132 KIAA1324Q6UXG2 1013 aaKnown RBP17.87■□□□□ 0.45
CPSF4-209ENST00000465132 ZNF783Q6ZMS7 281 aa17.87■□□□□ 0.45
CPSF4-209ENST00000465132 NT5DC3Q86UY8 548 aa17.87■□□□□ 0.45
CPSF4-209ENST00000465132 MFN1Q8IWA4 741 aa17.87■□□□□ 0.45
CPSF4-209ENST00000465132 LZTR1Q8N653 840 aa17.87■□□□□ 0.45
CPSF4-209ENST00000465132 EXD1Q8NHP7 514 aa17.87■□□□□ 0.45
CPSF4-209ENST00000465132 PEBP4Q96S96 227 aa17.87■□□□□ 0.45
CPSF4-209ENST00000465132 CALN1Q9BXU9 219 aa17.87■□□□□ 0.45
CPSF4-209ENST00000465132 DNAAF2Q9NVR5 837 aaKnown RBP17.87■□□□□ 0.45
CPSF4-209ENST00000465132 PYCARDQ9ULZ3 195 aa17.87■□□□□ 0.45
CPSF4-209ENST00000465132 ZKSCAN5Q9Y2L8 839 aa17.87■□□□□ 0.45
CPSF4-209ENST00000465132 PCDH15Q96QU1 1955 aa17.87■□□□□ 0.45
CPSF4-209ENST00000465132 NPC1O15118 1278 aa17.86■□□□□ 0.45
CPSF4-209ENST00000465132 LRIG2O94898 1065 aa17.86■□□□□ 0.45
CPSF4-209ENST00000465132 LUC7L3O95232 432 aaKnown RBP17.86■□□□□ 0.45
CPSF4-209ENST00000465132 KRT1P04264 644 aa17.86■□□□□ 0.45
CPSF4-209ENST00000465132 TNNT1P13805 278 aa17.86■□□□□ 0.45
CPSF4-209ENST00000465132 CD59P13987 128 aa17.86■□□□□ 0.45
CPSF4-209ENST00000465132 IL1R2P27930 398 aa17.86■□□□□ 0.45
CPSF4-209ENST00000465132 SERPINB6P35237 376 aa17.86■□□□□ 0.45
CPSF4-209ENST00000465132 FAM193AP78312 1265 aa17.86■□□□□ 0.45
CPSF4-209ENST00000465132 STARD3Q14849 445 aa17.86■□□□□ 0.45
CPSF4-209ENST00000465132 FUT11Q495W5 492 aa17.86■□□□□ 0.45
CPSF4-209ENST00000465132 RAB6CQ53S08 254 aa17.86■□□□□ 0.45
CPSF4-209ENST00000465132 SYCP2LQ5T4T6 812 aa17.86■□□□□ 0.45
CPSF4-209ENST00000465132 RFX8Q6ZV50 586 aa17.86■□□□□ 0.45
CPSF4-209ENST00000465132 METTL3Q86U44 580 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms