RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ANKLE1Q8NAG6 615 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.05□□□□□ -0.32
VAPB-203ENST00000463370 ARMC2Q8NEN0 867 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 CDKL2Q92772 493 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 ZNF689Q96CS4 500 aaPredicted RBP13.05□□□□□ -0.32
VAPB-203ENST00000463370 MTBPQ96DY7 904 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 ZNF333Q96JL9 665 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 ZNF512Q96ME7 567 aaPredicted RBP13.05□□□□□ -0.32
VAPB-203ENST00000463370 TBL1YQ9BQ87 522 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 VPS11Q9H270 941 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 RC3H2Q9HBD1 1191 aaKnown RBP13.05□□□□□ -0.32
VAPB-203ENST00000463370 NYNRINQ9P2P1 1898 aaKnown RBP13.04□□□□□ -0.32
VAPB-203ENST00000463370 ZNF840PA6NDX5 716 aa13.04□□□□□ -0.32
VAPB-203ENST00000463370 DRGXA6NNA5 263 aa13.04□□□□□ -0.32
VAPB-203ENST00000463370 USP1O94782 785 aa13.04□□□□□ -0.32
VAPB-203ENST00000463370 ITGA2BP08514 1039 aa13.04□□□□□ -0.32
VAPB-203ENST00000463370 CLTBP09497 229 aa13.04□□□□□ -0.32
VAPB-203ENST00000463370 ADRA1AP35348 466 aa13.04□□□□□ -0.32
VAPB-203ENST00000463370 ACVRL1P37023 503 aa13.04□□□□□ -0.32
VAPB-203ENST00000463370 SERPINB4P48594 390 aa13.04□□□□□ -0.32
VAPB-203ENST00000463370 SERPINB9P50453 376 aa13.04□□□□□ -0.32
VAPB-203ENST00000463370 OVGP1Q12889 678 aa13.04□□□□□ -0.32
VAPB-203ENST00000463370 POU6F1Q14863 301 aa13.04□□□□□ -0.32
VAPB-203ENST00000463370 PPM1JQ5JR12 505 aa13.04□□□□□ -0.32
VAPB-203ENST00000463370 C1orf53Q5VUE5 145 aa13.04□□□□□ -0.32
VAPB-203ENST00000463370 NAPEPLDQ6IQ20 393 aa13.04□□□□□ -0.32
VAPB-203ENST00000463370 PABPC5Q96DU9 382 aaKnown RBP13.04□□□□□ -0.32
VAPB-203ENST00000463370 MRGPRX2Q96LB1 330 aa13.04□□□□□ -0.32
VAPB-203ENST00000463370 IL22Q9GZX6 179 aa13.04□□□□□ -0.32
VAPB-203ENST00000463370 MANSC1Q9H8J5 431 aa13.04□□□□□ -0.32
VAPB-203ENST00000463370 STARD13Q9Y3M8 1113 aa13.04□□□□□ -0.32
VAPB-203ENST00000463370 FAM237BA0A1B0GVD1 139 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 TRIM43BA6NCK2 446 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 COCHO43405 550 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 SOD2P04179 222 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 ACRP10323 421 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 DNAJB2P25686 324 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 TEDDM1Q5T9Z0 273 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 TIGD7Q6NT04 549 aaPredicted RBP13.03□□□□□ -0.32
VAPB-203ENST00000463370 TIFABQ6ZNK6 161 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 SLC39A11Q8N1S5 342 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 ACVR1CQ8NER5 493 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 TRIM43Q96BQ3 446 aaPredicted RBP13.03□□□□□ -0.32
VAPB-203ENST00000463370 PAWRQ96IZ0 340 aaKnown RBP13.03□□□□□ -0.32
VAPB-203ENST00000463370 OXCT2Q9BYC2 517 aaPredicted RBP13.03□□□□□ -0.32
VAPB-203ENST00000463370 CYP4F11Q9HBI6 524 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 NT5MQ9NPB1 228 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 SOX13Q9UN79 622 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 ARL2BPQ9Y2Y0 163 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 AAR2Q9Y312 384 aaKnown RBP13.03□□□□□ -0.32
VAPB-203ENST00000463370 MICAL3Q7RTP6 2002 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 ABLIM3O94929 683 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 TACR2P21452 398 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 NPY2RP49146 381 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 TUFMP49411 452 aaKnown RBP13.03□□□□□ -0.32
VAPB-203ENST00000463370 NDST2P52849 883 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 IRX4P78413 519 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 RING1Q06587 406 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 PDE1CQ14123 709 aaPredicted RBP13.03□□□□□ -0.32
VAPB-203ENST00000463370 PCSK7Q16549 785 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 FAM133BQ5BKY9 247 aaKnown RBP13.03□□□□□ -0.32
VAPB-203ENST00000463370 C16orf46Q6P387 395 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 CMC1Q7Z7K0 106 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 ZNF354CQ86Y25 554 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 FITM2Q8N6M3 262 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 OR52K2Q8NGK3 314 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 ZNF461Q8TAF7 563 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 WBP2Q969T9 261 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 IQCGQ9H095 443 aaKnown RBP13.03□□□□□ -0.32
VAPB-203ENST00000463370 KDM4CQ9H3R0 1056 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 GKN1Q9NS71 199 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 C20orf96Q9NUD7 363 aaPredicted RBP13.03□□□□□ -0.32
VAPB-203ENST00000463370 COMMD8Q9NX08 183 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 AFF4Q9UHB7 1163 aaKnown RBP13.03□□□□□ -0.32
VAPB-203ENST00000463370 ACTL7AQ9Y615 435 aa13.03□□□□□ -0.32
VAPB-203ENST00000463370 KLKB1P03952 638 aa13.02□□□□□ -0.32
VAPB-203ENST00000463370 OR1E1P30953 314 aa13.02□□□□□ -0.32
VAPB-203ENST00000463370 ATP5C1P36542 298 aaKnown RBP13.02□□□□□ -0.32
VAPB-203ENST00000463370 SCTRP47872 440 aa13.02□□□□□ -0.32
VAPB-203ENST00000463370 PGGT1BP53609 377 aa13.02□□□□□ -0.32
VAPB-203ENST00000463370 DSG1Q02413 1049 aa13.02□□□□□ -0.32
VAPB-203ENST00000463370 LACTB2Q53H82 288 aaPredicted RBP13.02□□□□□ -0.32
VAPB-203ENST00000463370 STRA8Q7Z7C7 330 aa13.02□□□□□ -0.32
VAPB-203ENST00000463370 KCNMB4Q86W47 210 aa13.02□□□□□ -0.32
VAPB-203ENST00000463370 LGI2Q8N0V4 545 aa13.02□□□□□ -0.32
VAPB-203ENST00000463370 PGBD5Q8N414 524 aa13.02□□□□□ -0.32
VAPB-203ENST00000463370 KIFC1Q9BW19 673 aa13.02□□□□□ -0.32
VAPB-203ENST00000463370 RNF38Q9H0F5 515 aa13.02□□□□□ -0.32
VAPB-203ENST00000463370 SLC2A6Q9UGQ3 507 aa13.02□□□□□ -0.32
VAPB-203ENST00000463370 DNMT3LQ9UJW3 386 aa13.02□□□□□ -0.32
VAPB-203ENST00000463370 EMCNQ9ULC0 261 aa13.02□□□□□ -0.32
VAPB-203ENST00000463370 A0A0D9SEW6 157 aa13.02□□□□□ -0.33
VAPB-203ENST00000463370 C2orf78A6NCI8 922 aa13.02□□□□□ -0.33
VAPB-203ENST00000463370 SCAMP3O14828 347 aaKnown RBP13.02□□□□□ -0.33
VAPB-203ENST00000463370 RAMP2O60895 175 aa13.02□□□□□ -0.33
VAPB-203ENST00000463370 ANXA9O76027 345 aa13.02□□□□□ -0.33
VAPB-203ENST00000463370 UBOX5O94941 541 aa13.02□□□□□ -0.33
VAPB-203ENST00000463370 GSRP00390 522 aa13.02□□□□□ -0.33
VAPB-203ENST00000463370 MMP2P08253 660 aa13.02□□□□□ -0.33
VAPB-203ENST00000463370 CRHR1P34998 444 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms