RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 TCAF2A6NFQ2 919 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 TMX2-CTNND1H3BSU7 103 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 EFSO43281 561 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 NEBLO76041 1014 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 PCDH8O95206 1070 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 PRNPP04156 253 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 SLC2A3P11169 496 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 KRT10P13645 584 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 NME1P15531 152 aaKnown RBP11.96□□□□□ -0.49
PCCB-203ENST00000462542 ACADSBP45954 432 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 MTA1Q13330 715 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 NR0B2Q15466 257 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 LINC00303Q3SY05 128 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 ZC3H12AQ5D1E8 599 aaKnown RBP11.96□□□□□ -0.49
PCCB-203ENST00000462542 ZNF542PQ5EBM4 170 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 C6orf132Q5T0Z8 1188 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 FOXR1Q6PIV2 292 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 TMEM270Q6UE05 265 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 GCNT7Q6ZNI0 430 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 SLC22A18ASQ8N1D0 253 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 SH2D3CQ8N5H7 860 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 UBR7Q8N806 425 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 ZNF548Q8NEK5 533 aaPredicted RBP11.96□□□□□ -0.49
PCCB-203ENST00000462542 BTN2A2Q8WVV5 523 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 TFAP2BQ92481 460 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 FAM149B1Q96BN6 582 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 FEM1CQ96JP0 617 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 NOX5Q96PH1 765 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 IL12RB2Q99665 862 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 MYOCQ99972 504 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 HDAC8Q9BY41 377 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 GPR27Q9NS67 375 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 IPO11Q9UI26 975 aaKnown RBP11.96□□□□□ -0.49
PCCB-203ENST00000462542 XPO7Q9UIA9 1087 aaKnown RBP11.96□□□□□ -0.49
PCCB-203ENST00000462542 RCOR1Q9UKL0 485 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 PCDHGA7Q9Y5G6 932 aa11.96□□□□□ -0.49
PCCB-203ENST00000462542 M0QYV0 167 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 KPNA3O00505 521 aaPredicted RBP11.95□□□□□ -0.5
PCCB-203ENST00000462542 AQP9O43315 295 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 CHRNA3P32297 505 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 RABIFP47224 123 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 RPL34P49207 117 aaKnown RBP11.95□□□□□ -0.5
PCCB-203ENST00000462542 CLDN2P57739 230 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 RPS21P63220 83 aaKnown RBP11.95□□□□□ -0.5
PCCB-203ENST00000462542 KRT83P78385 493 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 EIF3IQ13347 325 aaKnown RBP11.95□□□□□ -0.5
PCCB-203ENST00000462542 FZD2Q14332 565 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 CBWD6Q4V339 395 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 ZCWPW2Q504Y3 356 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 CBWD3Q5JTY5 395 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 CBWD5Q5RIA9 395 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 TCERG1LQ5VWI1 586 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 SYPL2Q5VXT5 272 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 GUSBP11Q6P575 273 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 Q6ZVU0 165 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 ERN2Q76MJ5 926 aaKnown RBP11.95□□□□□ -0.5
PCCB-203ENST00000462542 PTAR1Q7Z6K3 402 aaPredicted RBP11.95□□□□□ -0.5
PCCB-203ENST00000462542 TAC4Q86UU9 113 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 ZSCAN30Q86W11 494 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 PARGQ86W56 976 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 NAT6Q93015 286 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 ARRDC3Q96B67 414 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 ALG14Q96F25 216 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 BMFQ96LC9 184 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 PRMT1Q99873 361 aaKnown RBP11.95□□□□□ -0.5
PCCB-203ENST00000462542 SLC17A9Q9BYT1 436 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 TRIM4Q9C037 500 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 FZD3Q9NPG1 666 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 ZFR2Q9UPR6 939 aaKnown RBP11.95□□□□□ -0.5
PCCB-203ENST00000462542 PCDHB4Q9Y5E5 795 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 FLNCQ14315 2725 aa11.95□□□□□ -0.5
PCCB-203ENST00000462542 BNIP3LO60238 219 aa11.94□□□□□ -0.5
PCCB-203ENST00000462542 TRUB2O95900 331 aaKnown RBP11.94□□□□□ -0.5
PCCB-203ENST00000462542 CENPBP07199 599 aaPredicted RBP11.94□□□□□ -0.5
PCCB-203ENST00000462542 ITGB6P18564 788 aa11.94□□□□□ -0.5
PCCB-203ENST00000462542 CMA1P23946 247 aa11.94□□□□□ -0.5
PCCB-203ENST00000462542 YWHAZP63104 245 aaKnown RBP11.94□□□□□ -0.5
PCCB-203ENST00000462542 EIF4EBP2Q13542 120 aaPredicted RBP11.94□□□□□ -0.5
PCCB-203ENST00000462542 TMEM259Q4ZIN3 620 aa11.94□□□□□ -0.5
PCCB-203ENST00000462542 CXorf57Q6NSI4 855 aaKnown RBP11.94□□□□□ -0.5
PCCB-203ENST00000462542 KIAA1161Q6NSJ0 714 aa11.94□□□□□ -0.5
PCCB-203ENST00000462542 KYAT3Q6YP21 454 aaKnown RBP11.94□□□□□ -0.5
PCCB-203ENST00000462542 C14orf80Q86SX3 495 aa11.94□□□□□ -0.5
PCCB-203ENST00000462542 OR2A12Q8NGT7 310 aa11.94□□□□□ -0.5
PCCB-203ENST00000462542 STK32AQ8WU08 396 aa11.94□□□□□ -0.5
PCCB-203ENST00000462542 LIN37Q96GY3 246 aaPredicted RBP11.94□□□□□ -0.5
PCCB-203ENST00000462542 PPP1R16AQ96I34 528 aa11.94□□□□□ -0.5
PCCB-203ENST00000462542 LENG8Q96PV6 779 aaPredicted RBP11.94□□□□□ -0.5
PCCB-203ENST00000462542 MED15Q96RN5 788 aa11.94□□□□□ -0.5
PCCB-203ENST00000462542 BOCQ9BWV1 1114 aa11.94□□□□□ -0.5
PCCB-203ENST00000462542 POPDC2Q9HBU9 364 aa11.94□□□□□ -0.5
PCCB-203ENST00000462542 VPS28Q9UK41 221 aa11.94□□□□□ -0.5
PCCB-203ENST00000462542 ACSL6Q9UKU0 697 aa11.94□□□□□ -0.5
PCCB-203ENST00000462542 HS3ST2Q9Y278 367 aa11.94□□□□□ -0.5
PCCB-203ENST00000462542 OR51B4Q9Y5P0 310 aa11.94□□□□□ -0.5
PCCB-203ENST00000462542 AHCTF1Q8WYP5 2266 aa11.93□□□□□ -0.5
PCCB-203ENST00000462542 POM121BA6NF01 834 aa11.93□□□□□ -0.5
PCCB-203ENST00000462542 RNF225M0QZC1 329 aaPredicted RBP11.93□□□□□ -0.5
PCCB-203ENST00000462542 FPGTO14772 594 aa11.93□□□□□ -0.5
PCCB-203ENST00000462542 PLD2O14939 933 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms