RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 CXorf57Q6NSI4 855 aaKnown RBP13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 IL27RAQ6UWB1 636 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 ZNF783Q6ZMS7 281 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 SPC24Q8NBT2 197 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 SNX19Q92543 992 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 ARHGEF26Q96DR7 871 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 PACSIN1Q9BY11 444 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 MUC3BQ9H195 1237 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 DHX35Q9H5Z1 703 aaKnown RBP13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 CATSPERBQ9H7T0 1116 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 SGK2Q9HBY8 427 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 CD93Q9NPY3 652 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 PRSS16Q9NQE7 514 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 INTS6Q9UL03 887 aaKnown RBP13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 AP4E1Q9UPM8 1137 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 PCDHB9Q9Y5E1 797 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 TNRC6BQ9UPQ9 1833 aaKnown RBP13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 ILVBLA1L0T0 632 aa13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 TARSL2A2RTX5 802 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 CREB3O43889 395 aa13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 LRCH4O75427 683 aa13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 MZF1P28698 734 aaPredicted RBP13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 EPHB2P29323 1055 aa13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 ETFBP38117 255 aa13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 ARHGAP25P42331 645 aa13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 SSR1P43307 286 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 MAPKAPK2P49137 400 aa13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 IRAK1P51617 712 aa13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 RPS14P62263 151 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 SHC2P98077 582 aa13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 TEAD4Q15561 434 aa13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 HNRNPA1L2Q32P51 320 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 MANEALQ5VSG8 457 aa13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 TFAP2DQ7Z6R9 452 aa13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 APCDD1Q8J025 514 aa13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 ARFGAP1Q8N6T3 406 aa13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 ZNF366Q8N895 744 aa13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 DEFB124Q8NES8 71 aa13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 SLC35G2Q8TBE7 412 aa13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 BAG1Q99933 345 aaPredicted RBP13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 C2orf49Q9BVC5 232 aaPredicted RBP13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 DNAAF2Q9NVR5 837 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 TMEM248Q9NWD8 314 aa13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 SLC25A13Q9UJS0 675 aa13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 VPS28Q9UK41 221 aa13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 ERVW-1Q9UQF0 538 aa13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 EPN1Q9Y6I3 576 aaPredicted RBP13.56□□□□□ -0.24
RAB11FIP3-207ENST00000461009 EDDM13A0A1B0GTR0 161 aa13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 GOLGA6L3A6NEY3 463 aa13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 FAM72CH0Y354 149 aa13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 GIPC1O14908 333 aa13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 FGF10O15520 208 aaPredicted RBP13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 DAPK3O43293 454 aa13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 PROSCO94903 275 aa13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 LCA5LO95447 670 aa13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 SEMA4FO95754 770 aa13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 CER1O95813 267 aa13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 FECHP22830 423 aa13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 AFF3P51826 1226 aaKnown RBP13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 GSDMDP57764 484 aa13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 TPI1P60174 286 aa13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 SEMA3BQ13214 749 aa13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 FAM72AQ5TYM5 149 aa13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 FAM72DQ6L9T8 149 aa13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 USP30Q70CQ3 517 aa13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 FAM72BQ86X60 149 aa13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 PYROXD2Q8N2H3 581 aa13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 ZCCHC9Q8N567 271 aaKnown RBP13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 BTBD6Q96KE9 485 aa13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 OMDQ99983 421 aa13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 SNRNP25Q9BV90 132 aaKnown RBP13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 RSPH9Q9H1X1 276 aaPredicted RBP13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 FSCN3Q9NQT6 498 aa13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 EIF2B4Q9UI10 523 aaKnown RBP13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 PCDHA13Q9Y5I0 950 aa13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 PI4KAP42356 2102 aa13.55□□□□□ -0.24
RAB11FIP3-207ENST00000461009 CKAP5Q14008 2032 aa13.54□□□□□ -0.24
RAB11FIP3-207ENST00000461009 EEF2KO00418 725 aaKnown RBP13.54□□□□□ -0.24
RAB11FIP3-207ENST00000461009 NDUFA10O95299 355 aa13.54□□□□□ -0.24
RAB11FIP3-207ENST00000461009 C7P10643 843 aa13.54□□□□□ -0.24
RAB11FIP3-207ENST00000461009 ARL4AP40617 200 aa13.54□□□□□ -0.24
RAB11FIP3-207ENST00000461009 NOP2P46087 812 aaKnown RBP13.54□□□□□ -0.24
RAB11FIP3-207ENST00000461009 HCAR3P49019 387 aa13.54□□□□□ -0.24
RAB11FIP3-207ENST00000461009 VASPP50552 380 aaPredicted RBP13.54□□□□□ -0.24
RAB11FIP3-207ENST00000461009 GNA12Q03113 381 aa13.54□□□□□ -0.24
RAB11FIP3-207ENST00000461009 SLC20A2Q08357 652 aa13.54□□□□□ -0.24
RAB11FIP3-207ENST00000461009 FOXC1Q12948 553 aa13.54□□□□□ -0.24
RAB11FIP3-207ENST00000461009 GRIK2Q13002 908 aa13.54□□□□□ -0.24
RAB11FIP3-207ENST00000461009 MESDQ14696 234 aa13.54□□□□□ -0.24
RAB11FIP3-207ENST00000461009 TXLNBQ8N3L3 684 aa13.54□□□□□ -0.24
RAB11FIP3-207ENST00000461009 TEKT4Q8WW24 435 aa13.54□□□□□ -0.24
RAB11FIP3-207ENST00000461009 RFFLQ8WZ73 363 aa13.54□□□□□ -0.24
RAB11FIP3-207ENST00000461009 SKA1Q96BD8 255 aa13.54□□□□□ -0.24
RAB11FIP3-207ENST00000461009 ALG14Q96F25 216 aa13.54□□□□□ -0.24
RAB11FIP3-207ENST00000461009 CALR3Q96L12 384 aaKnown RBP13.54□□□□□ -0.24
RAB11FIP3-207ENST00000461009 SPON2Q9BUD6 331 aa13.54□□□□□ -0.24
RAB11FIP3-207ENST00000461009 MAGEB5Q9BZ81 275 aa13.54□□□□□ -0.24
RAB11FIP3-207ENST00000461009 MAGEH1Q9H213 219 aa13.54□□□□□ -0.24
RAB11FIP3-207ENST00000461009 PABPC3Q9H361 631 aaKnown RBP13.54□□□□□ -0.24
RAB11FIP3-207ENST00000461009 ZWILCHQ9H900 591 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms