RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 PLA2G4BP0C869 781 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 GHRP10912 638 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 VDRP11473 427 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 CKBP12277 381 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 HNRNPLP14866 589 aaKnown RBP eCLIP5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 RPL17P18621 184 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 RPA1P27694 616 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 SFNP31947 248 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 UBA7P41226 1012 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 SLC6A9P48067 706 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 RARRES1P49788 294 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 CASP5P51878 434 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 NDUFA8P51970 172 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 NHLH1Q02575 133 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 GRIK3Q13003 919 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 EMC2Q15006 297 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 TMEM119Q4V9L6 283 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 C19orf54Q5BKX5 351 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 XKR3Q5GH77 459 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 ZNF484Q5JVG2 852 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 KRT79Q5XKE5 535 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 SYT10Q6XYQ8 523 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 KRBA2Q6ZNG9 492 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 SDCCAG8Q86SQ7 713 aaPredicted RBP5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 SERINC5Q86VE9 423 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 SESTD1Q86VW0 696 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 CDR2LQ86X02 465 aaPredicted RBP5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 C4orf19Q8IY42 314 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 C10orf67Q8IYJ2 551 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 DAW1Q8N136 415 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 OR2C3Q8N628 320 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 FSIP1Q8NA03 581 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 RASSF8Q8NHQ8 419 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 NEU4Q8WWR8 484 aaPredicted RBP5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 PRPF31Q8WWY3 499 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 RAB24Q969Q5 203 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 EXOC4Q96A65 974 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 DHX58Q96C10 678 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 MTFMTQ96DP5 389 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 SLC35A4Q96G79 324 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 FAM167AQ96KS9 214 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 MRGPRX4Q96LA9 322 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 NAP1L4Q99733 375 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 VRK1Q99986 396 aaPredicted RBP5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 POLR3CQ9BUI4 534 aaPredicted RBP5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 FGFBP2Q9BYJ0 223 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 BTBD1Q9H0C5 482 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 POLR3FQ9H1D9 316 aaPredicted RBP5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 BLZF1Q9H2G9 400 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 MMRN2Q9H8L6 949 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 MINDY3Q9H8M7 445 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 KIAA1586Q9HCI6 787 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 ARFGAP3Q9NP61 516 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 NRBP2Q9NSY0 501 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 PNPOQ9NVS9 261 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 PARPBPQ9NWS1 579 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 ZNF446Q9NWS9 450 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 CPSF2Q9P2I0 782 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 THEGQ9P2T0 379 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 HECAQ9UBI9 543 aaPredicted RBP5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 CORO2BQ9UQ03 480 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 SIK3Q9Y2K2 1263 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 SNX13Q9Y5W8 968 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 XIRP2A4UGR9 3374 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 ANKRD11Q6UB99 2663 aaPredicted RBP5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 CHD9Q3L8U1 2897 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 PTPRSQ13332 1948 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 A0A087WZ62 844 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 A0A1W2PPL8 197 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 MBLAC1A4D2B0 266 aaPredicted RBP5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 ARHGEF35A5YM69 484 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 MYMKA6NI61 221 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 LAD1O00515 517 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 POLR2DO15514 142 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 DAPK3O43293 454 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 PIP5K1CO60331 668 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 PRAMEF4O60810 478 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 LYPLA2O95372 231 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 YEATS4O95619 227 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 TIMP1P01033 207 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 IQCF3P0C7M6 154 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 FAM200BP0CF97 657 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 GAAP10253 952 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 PFKFB1P16118 471 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 TYRP1P17643 537 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 GLRA2P23416 452 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 TNFSF4P23510 183 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 ECHS1P30084 290 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 CD52P31358 61 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 LONP1P36776 959 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 PPM1FP49593 454 aaPredicted RBP5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 GATMP50440 423 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 POLGP54098 1239 aaPredicted RBP5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 SLC12A3P55017 1021 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 PER3P56645 1201 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 NLRP11P59045 1033 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 MRPS6P82932 125 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 MGAT3Q09327 533 aa5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 TARDBPQ13148 414 aaKnown RBP eCLIP5.11□□□□□ -1.59
ATPAF1-203ENST00000460928 MAPK7Q13164 816 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms