RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 ZBTB14O43829 449 aa18.46■□□□□ 0.55
HPS3-202ENST00000460120 MGEA5O60502 916 aa18.46■□□□□ 0.55
HPS3-202ENST00000460120 GRK2P25098 689 aa18.46■□□□□ 0.55
HPS3-202ENST00000460120 CHRNA4P43681 627 aa18.46■□□□□ 0.55
HPS3-202ENST00000460120 RAP1GDS1P52306 607 aa18.46■□□□□ 0.55
HPS3-202ENST00000460120 DNAL1Q4LDG9 190 aa18.46■□□□□ 0.55
HPS3-202ENST00000460120 ZNF280DQ6N043 979 aa18.46■□□□□ 0.55
HPS3-202ENST00000460120 TMEM154Q6P9G4 183 aa18.46■□□□□ 0.55
HPS3-202ENST00000460120 SCN4BQ8IWT1 228 aa18.46■□□□□ 0.55
HPS3-202ENST00000460120 UPF1Q92900 1129 aaKnown RBP eCLIP18.46■□□□□ 0.55
HPS3-202ENST00000460120 SLC9A7Q96T83 725 aa18.46■□□□□ 0.55
HPS3-202ENST00000460120 TLK1Q9UKI8 766 aa18.46■□□□□ 0.55
HPS3-202ENST00000460120 ANPEPP15144 967 aa18.46■□□□□ 0.55
HPS3-202ENST00000460120 SERPINB6P35237 376 aa18.46■□□□□ 0.55
HPS3-202ENST00000460120 CPOXP36551 454 aa18.46■□□□□ 0.55
HPS3-202ENST00000460120 CXCR3P49682 368 aa18.46■□□□□ 0.55
HPS3-202ENST00000460120 SCAPQ12770 1279 aa18.46■□□□□ 0.55
HPS3-202ENST00000460120 RAB41Q5JT25 222 aa18.46■□□□□ 0.55
HPS3-202ENST00000460120 FAM91A1Q658Y4 838 aa18.46■□□□□ 0.55
HPS3-202ENST00000460120 FRMD7Q6ZUT3 714 aa18.46■□□□□ 0.55
HPS3-202ENST00000460120 DEFB107AQ8IZN7 70 aa18.46■□□□□ 0.55
HPS3-202ENST00000460120 ATPAF2Q8N5M1 289 aa18.46■□□□□ 0.55
HPS3-202ENST00000460120 SLC26A7Q8TE54 656 aa18.46■□□□□ 0.55
HPS3-202ENST00000460120 GATA5Q9BWX5 397 aaPredicted RBP18.46■□□□□ 0.55
HPS3-202ENST00000460120 YIPF3Q9GZM5 350 aa18.46■□□□□ 0.55
HPS3-202ENST00000460120 TTC24A2A3L6 582 aaPredicted RBP18.45■□□□□ 0.54
HPS3-202ENST00000460120 DPPA5A6NC42 116 aa18.45■□□□□ 0.54
HPS3-202ENST00000460120 TNPO2O14787 897 aaKnown RBP18.45■□□□□ 0.54
HPS3-202ENST00000460120 AOC1P19801 751 aa18.45■□□□□ 0.54
HPS3-202ENST00000460120 EPHA3P29320 983 aa18.45■□□□□ 0.54
HPS3-202ENST00000460120 ATXN3P54252 364 aaPredicted RBP18.45■□□□□ 0.54
HPS3-202ENST00000460120 NAB1Q13506 487 aa18.45■□□□□ 0.54
HPS3-202ENST00000460120 PRPSAP1Q14558 356 aa18.45■□□□□ 0.54
HPS3-202ENST00000460120 UPP1Q16831 310 aa18.45■□□□□ 0.54
HPS3-202ENST00000460120 CCDC153Q494R4 210 aa18.45■□□□□ 0.54
HPS3-202ENST00000460120 ESRP1Q6NXG1 681 aaKnown RBP18.45■□□□□ 0.54
HPS3-202ENST00000460120 RUVBL2Q9Y230 463 aaKnown RBP18.45■□□□□ 0.54
HPS3-202ENST00000460120 ZNF195O14628 629 aa18.45■□□□□ 0.54
HPS3-202ENST00000460120 PCSK1P29120 753 aa18.45■□□□□ 0.54
HPS3-202ENST00000460120 GRIK1P39086 918 aa18.45■□□□□ 0.54
HPS3-202ENST00000460120 CDH17Q12864 832 aa18.45■□□□□ 0.54
HPS3-202ENST00000460120 PPM1LQ5SGD2 360 aa18.45■□□□□ 0.54
HPS3-202ENST00000460120 STXBP5Q5T5C0 1151 aa18.45■□□□□ 0.54
HPS3-202ENST00000460120 NXNQ6DKJ4 435 aa18.45■□□□□ 0.54
HPS3-202ENST00000460120 NET1Q7Z628 596 aaPredicted RBP18.45■□□□□ 0.54
HPS3-202ENST00000460120 HPS6Q86YV9 775 aa18.45■□□□□ 0.54
HPS3-202ENST00000460120 RNF135Q8IUD6 432 aa18.45■□□□□ 0.54
HPS3-202ENST00000460120 TMEM86AQ8N2M4 240 aa18.45■□□□□ 0.54
HPS3-202ENST00000460120 TRPV1Q8NER1 839 aa18.45■□□□□ 0.54
HPS3-202ENST00000460120 ZSCAN18Q8TBC5 510 aaPredicted RBP18.45■□□□□ 0.54
HPS3-202ENST00000460120 ACE2Q9BYF1 805 aaPredicted RBP18.45■□□□□ 0.54
HPS3-202ENST00000460120 DLGAP2Q9P1A6 1054 aa18.45■□□□□ 0.54
HPS3-202ENST00000460120 NCAM2O15394 837 aa18.44■□□□□ 0.54
HPS3-202ENST00000460120 UBTFL6P0CB48 400 aaPredicted RBP18.44■□□□□ 0.54
HPS3-202ENST00000460120 ACADSP16219 412 aa18.44■□□□□ 0.54
HPS3-202ENST00000460120 MSX2P35548 267 aaPredicted RBP18.44■□□□□ 0.54
HPS3-202ENST00000460120 NAGLUP54802 743 aa18.44■□□□□ 0.54
HPS3-202ENST00000460120 TAF2Q6P1X5 1199 aa18.44■□□□□ 0.54
HPS3-202ENST00000460120 IZUMO2Q6UXV1 221 aa18.44■□□□□ 0.54
HPS3-202ENST00000460120 ZNF354CQ86Y25 554 aa18.44■□□□□ 0.54
HPS3-202ENST00000460120 CCNYL1Q8N7R7 359 aa18.44■□□□□ 0.54
HPS3-202ENST00000460120 DDX50Q9BQ39 737 aaKnown RBP18.44■□□□□ 0.54
HPS3-202ENST00000460120 NUF2Q9BZD4 464 aa18.44■□□□□ 0.54
HPS3-202ENST00000460120 IL22Q9GZX6 179 aa18.44■□□□□ 0.54
HPS3-202ENST00000460120 CDH19Q9H159 772 aa18.44■□□□□ 0.54
HPS3-202ENST00000460120 PAGE1O75459 146 aa18.44■□□□□ 0.54
HPS3-202ENST00000460120 KLHL2O95198 593 aa18.44■□□□□ 0.54
HPS3-202ENST00000460120 AHSGP02765 367 aa18.44■□□□□ 0.54
HPS3-202ENST00000460120 ODC1P11926 461 aa18.44■□□□□ 0.54
HPS3-202ENST00000460120 INSCQ1MX18 579 aa18.44■□□□□ 0.54
HPS3-202ENST00000460120 TFAP2DQ7Z6R9 452 aa18.44■□□□□ 0.54
HPS3-202ENST00000460120 GPR152Q8TDT2 470 aa18.44■□□□□ 0.54
HPS3-202ENST00000460120 HTTP42858 3142 aa18.44■□□□□ 0.54
HPS3-202ENST00000460120 AIM2O14862 343 aa18.43■□□□□ 0.54
HPS3-202ENST00000460120 TRIM13O60858 407 aa18.43■□□□□ 0.54
HPS3-202ENST00000460120 F9P00740 461 aa18.43■□□□□ 0.54
HPS3-202ENST00000460120 GABRB3P28472 473 aa18.43■□□□□ 0.54
HPS3-202ENST00000460120 GRIA4P48058 902 aa18.43■□□□□ 0.54
HPS3-202ENST00000460120 HARS2P49590 506 aaKnown RBP18.43■□□□□ 0.54
HPS3-202ENST00000460120 ZNF157P51786 506 aaPredicted RBP18.43■□□□□ 0.54
HPS3-202ENST00000460120 ACTR3P61158 418 aa18.43■□□□□ 0.54
HPS3-202ENST00000460120 KLC1Q07866 573 aa18.43■□□□□ 0.54
HPS3-202ENST00000460120 TRMT5Q32P41 509 aaKnown RBP18.43■□□□□ 0.54
HPS3-202ENST00000460120 TMEM198Q66K66 360 aa18.43■□□□□ 0.54
HPS3-202ENST00000460120 METTL23Q86XA0 190 aa18.43■□□□□ 0.54
HPS3-202ENST00000460120 CASP10Q92851 521 aa18.43■□□□□ 0.54
HPS3-202ENST00000460120 SLC39A8Q9C0K1 460 aa18.43■□□□□ 0.54
HPS3-202ENST00000460120 RRAGCQ9HB90 399 aa18.43■□□□□ 0.54
HPS3-202ENST00000460120 NDE1Q9NXR1 346 aa18.43■□□□□ 0.54
HPS3-202ENST00000460120 TRHDEQ9UKU6 1024 aa18.43■□□□□ 0.54
HPS3-202ENST00000460120 PADI3Q9ULW8 664 aa18.43■□□□□ 0.54
HPS3-202ENST00000460120 PCDHB12Q9Y5F1 795 aa18.43■□□□□ 0.54
HPS3-202ENST00000460120 PTCH2Q9Y6C5 1203 aa18.43■□□□□ 0.54
HPS3-202ENST00000460120 PDCD11Q14690 1871 aaKnown RBP18.43■□□□□ 0.54
HPS3-202ENST00000460120 C9IYK1 514 aa18.43■□□□□ 0.54
HPS3-202ENST00000460120 CCL22O00626 93 aa18.43■□□□□ 0.54
HPS3-202ENST00000460120 GJA9P57773 515 aa18.43■□□□□ 0.54
HPS3-202ENST00000460120 ITKQ08881 620 aa18.43■□□□□ 0.54
HPS3-202ENST00000460120 PDCD2Q16342 344 aaPredicted RBP18.43■□□□□ 0.54
HPS3-202ENST00000460120 BTBD8Q5XKL5 378 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms