RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 EDEM3Q9BZQ6 932 aa18.28■□□□□ 0.52
MSH6-207ENST00000456246 ATP13A1Q9HD20 1204 aa18.28■□□□□ 0.52
MSH6-207ENST00000456246 TM7SF3Q9NS93 570 aa18.28■□□□□ 0.52
MSH6-207ENST00000456246 PCDHB9Q9Y5E1 797 aa18.28■□□□□ 0.52
MSH6-207ENST00000456246 A0A1B0GTH6 734 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 CBX4O00257 560 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 FLRT2O43155 660 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 LATO43561 262 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 PLRG1O43660 514 aaKnown RBP18.27■□□□□ 0.52
MSH6-207ENST00000456246 SH3BP5O60239 455 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 MT-CO1P00395 513 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 TNFAIP3P21580 790 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 SERPINH1P50454 418 aaKnown RBP18.27■□□□□ 0.52
MSH6-207ENST00000456246 BNC1Q01954 994 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 FOXC1Q12948 553 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 ZNF423Q2M1K9 1284 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 KIF19Q2TAC6 998 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 SLC45A4Q5BKX6 768 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 EFHC2Q5JST6 749 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 ARTNQ5T4W7 220 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 RWDD4Q6NW29 188 aaKnown RBP18.27■□□□□ 0.52
MSH6-207ENST00000456246 C22orf39Q6P5X5 142 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.27■□□□□ 0.52
MSH6-207ENST00000456246 DRC7Q8IY82 874 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 PCDH20Q8N6Y1 951 aaKnown RBP18.27■□□□□ 0.52
MSH6-207ENST00000456246 TMIEQ8NEW7 156 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 OR7D4Q8NG98 312 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 OR2A12Q8NGT7 310 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 TBC1D31Q96DN5 1066 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 CNPY3Q9BT09 278 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 FUCA2Q9BTY2 467 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 SPON2Q9BUD6 331 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 PREBQ9HCU5 417 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 DYRK4Q9NR20 520 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 TMEM248Q9NWD8 314 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 DMTF1Q9Y222 760 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 FNDC3AQ9Y2H6 1198 aaKnown RBP18.27■□□□□ 0.52
MSH6-207ENST00000456246 CABIN1Q9Y6J0 2220 aa18.27■□□□□ 0.52
MSH6-207ENST00000456246 TBC1D3DA0A087WVF3 549 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 TBC1D3IA0A087WXS9 549 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 TBC1D3EA0A087X179 549 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 TBC1D3KA0A087X1G2 549 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 TCRBV5S1A1TA0A578 114 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 TBC1D3FA6NER0 549 aaPredicted RBP18.26■□□□□ 0.51
MSH6-207ENST00000456246 TBC1D3LB9A6J9 549 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 BNIP3LO60238 219 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 LRIG2O94898 1065 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 GJB6O95452 261 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 SERPINC1P01008 464 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 PLEKP08567 350 aaPredicted RBP18.26■□□□□ 0.51
MSH6-207ENST00000456246 TBC1D3HP0C7X1 549 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 RRM1P23921 792 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 CHRNA3P32297 505 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 CCT8P50990 548 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 ASIC2Q16515 512 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 AGBL4Q5VU57 503 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 TBC1D3GQ6DHY5 549 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 TBC1D3CQ6IPX1 549 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 DCUN1D2Q6PH85 259 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 SLFN11Q7Z7L1 901 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 PRPF39Q86UA1 669 aaKnown RBP18.26■□□□□ 0.51
MSH6-207ENST00000456246 TRIM69Q86WT6 500 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 MCOLN2Q8IZK6 566 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 TBC1D3Q8IZP1 549 aaPredicted RBP18.26■□□□□ 0.51
MSH6-207ENST00000456246 PPP1R16AQ96I34 528 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 MCEEQ96PE7 176 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 SYT11Q9BT88 431 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 MAGEH1Q9H213 219 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 AIPL1Q9NZN9 384 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 SARDHQ9UL12 918 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 HPCAL4Q9UM19 191 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 SNX11Q9Y5W9 270 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 SLCO1B1Q9Y6L6 691 aa18.26■□□□□ 0.51
MSH6-207ENST00000456246 SPAARA0A1B0GVQ0 90 aa18.25■□□□□ 0.51
MSH6-207ENST00000456246 LRRC53A6NM62 1247 aa18.25■□□□□ 0.51
MSH6-207ENST00000456246 ZMPSTE24O75844 475 aa18.25■□□□□ 0.51
MSH6-207ENST00000456246 L1CAMP32004 1257 aa18.25■□□□□ 0.51
MSH6-207ENST00000456246 CTSKP43235 329 aa18.25■□□□□ 0.51
MSH6-207ENST00000456246 CNTN1Q12860 1018 aa18.25■□□□□ 0.51
MSH6-207ENST00000456246 IQCB1Q15051 598 aa18.25■□□□□ 0.51
MSH6-207ENST00000456246 TRIP6Q15654 476 aaKnown RBP18.25■□□□□ 0.51
MSH6-207ENST00000456246 INAVAQ3KP66 663 aa18.25■□□□□ 0.51
MSH6-207ENST00000456246 FIGNQ5HY92 759 aa18.25■□□□□ 0.51
MSH6-207ENST00000456246 PPP1R15BQ5SWA1 713 aa18.25■□□□□ 0.51
MSH6-207ENST00000456246 NEK5Q6P3R8 708 aa18.25■□□□□ 0.51
MSH6-207ENST00000456246 LINGO4Q6UY18 593 aa18.25■□□□□ 0.51
MSH6-207ENST00000456246 DBX2Q6ZNG2 339 aa18.25■□□□□ 0.51
MSH6-207ENST00000456246 GLRX5Q86SX6 157 aa18.25■□□□□ 0.51
MSH6-207ENST00000456246 NLRP14Q86W24 1093 aa18.25■□□□□ 0.51
MSH6-207ENST00000456246 CCDC185Q8N715 623 aa18.25■□□□□ 0.51
MSH6-207ENST00000456246 SLC6A18Q96N87 628 aa18.25■□□□□ 0.51
MSH6-207ENST00000456246 CDC6Q99741 560 aa18.25■□□□□ 0.51
MSH6-207ENST00000456246 AASDHPPTQ9NRN7 309 aa18.25■□□□□ 0.51
MSH6-207ENST00000456246 PARVAQ9NVD7 372 aa18.25■□□□□ 0.51
MSH6-207ENST00000456246 DONSONQ9NYP3 566 aa18.25■□□□□ 0.51
MSH6-207ENST00000456246 IL36AQ9UHA7 158 aa18.25■□□□□ 0.51
MSH6-207ENST00000456246 PLXNA2O75051 1894 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 CHD5Q8TDI0 1954 aa18.24■□□□□ 0.51
MSH6-207ENST00000456246 ZSCAN5CA6NGD5 496 aaPredicted RBP18.24■□□□□ 0.51
MSH6-207ENST00000456246 K7ERQ8 282 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms