RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 TBC1D3CQ6IPX1 549 aa13.27□□□□□ -0.29
TREX1-203ENST00000456089 LRRC31Q6UY01 552 aa13.27□□□□□ -0.29
TREX1-203ENST00000456089 Q6ZVU0 165 aa13.27□□□□□ -0.29
TREX1-203ENST00000456089 PHLDB2Q86SQ0 1253 aa13.27□□□□□ -0.29
TREX1-203ENST00000456089 PROSER1Q86XN7 944 aa13.27□□□□□ -0.29
TREX1-203ENST00000456089 TBC1D3Q8IZP1 549 aaPredicted RBP13.27□□□□□ -0.29
TREX1-203ENST00000456089 SERAC1Q96JX3 654 aa13.27□□□□□ -0.29
TREX1-203ENST00000456089 NPY6RQ99463 290 aa13.27□□□□□ -0.29
TREX1-203ENST00000456089 CDC6Q99741 560 aa13.27□□□□□ -0.29
TREX1-203ENST00000456089 FEM1AQ9BSK4 669 aa13.27□□□□□ -0.29
TREX1-203ENST00000456089 SELENOOQ9BVL4 669 aa13.27□□□□□ -0.29
TREX1-203ENST00000456089 TKTL2Q9H0I9 626 aa13.27□□□□□ -0.29
TREX1-203ENST00000456089 METTL5Q9NRN9 209 aaKnown RBP13.27□□□□□ -0.29
TREX1-203ENST00000456089 SLC25A13Q9UJS0 675 aa13.27□□□□□ -0.29
TREX1-203ENST00000456089 FZD4Q9ULV1 537 aa13.27□□□□□ -0.29
TREX1-203ENST00000456089 CA5BQ9Y2D0 317 aa13.27□□□□□ -0.29
TREX1-203ENST00000456089 ITPR1Q14643 2758 aa13.27□□□□□ -0.29
TREX1-203ENST00000456089 ARID1BQ8NFD5 2236 aaPredicted RBP13.27□□□□□ -0.29
TREX1-203ENST00000456089 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.26□□□□□ -0.29
TREX1-203ENST00000456089 A0A1B0GTH6 734 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 A0A1B0GTQ1 180 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 A0A1W2PR77 199 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 RNF103O00237 685 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 SNAP91O60641 907 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 MT-CO1P00395 513 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 TPM3P06753 285 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 SDC4P31431 198 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 NNMTP40261 264 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 GRK6P43250 576 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 UBASH3AP57075 661 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 FANCCQ00597 558 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 CNTN1Q12860 1018 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 DNAJC3Q13217 504 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 ZNF177Q13360 481 aaPredicted RBP13.26□□□□□ -0.29
TREX1-203ENST00000456089 SLC12A1Q13621 1099 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 ELAVL3Q14576 367 aaKnown RBP13.26□□□□□ -0.29
TREX1-203ENST00000456089 DLG2Q15700 870 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 ASIC2Q16515 512 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 CLEC16AQ2KHT3 1053 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 ACBD5Q5T8D3 534 aaPredicted RBP13.26□□□□□ -0.29
TREX1-203ENST00000456089 SFMBT2Q5VUG0 894 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 PPP1R2P3Q6NXS1 205 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 LRSAM1Q6UWE0 723 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 DHRS13Q6UX07 377 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 ARCQ7LC44 396 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 PGAP3Q96FM1 320 aaPredicted RBP13.26□□□□□ -0.29
TREX1-203ENST00000456089 CFAP57Q96MR6 1250 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 NAP1L5Q96NT1 182 aaPredicted RBP13.26□□□□□ -0.29
TREX1-203ENST00000456089 TBCBQ99426 244 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 MYOCQ99972 504 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 MUC3BQ9H195 1237 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 CAAP1Q9H8G2 361 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 VPS28Q9UK41 221 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 LHX6Q9UPM6 363 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 OR51B4Q9Y5P0 310 aa13.26□□□□□ -0.29
TREX1-203ENST00000456089 LRRC53A6NM62 1247 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 C10orf142B7Z368 130 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 K7ERQ8 282 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 TNFSF14O43557 240 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 PCDHGA12O60330 932 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 DKK1O94907 266 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 KRT3P12035 628 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 UNGP13051 313 aaPredicted RBP13.25□□□□□ -0.29
TREX1-203ENST00000456089 GLDCP23378 1020 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 FLT3P36888 993 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 CXCR3P49682 368 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 CCR5P51681 352 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 PLK1P53350 603 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 ATP11AP98196 1134 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 SULT2A1Q06520 285 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 SFSWAPQ12872 951 aaKnown RBP13.25□□□□□ -0.29
TREX1-203ENST00000456089 BNIP3Q12983 259 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 NR1I3Q14994 352 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 ARL13BQ3SXY8 428 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 LINGO4Q6UY18 593 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 TMPRSS7Q7RTY8 843 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 TFAP2DQ7Z6R9 452 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 PIP4K2CQ8TBX8 421 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 OR8D1Q8WZ84 308 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 KLK6Q92876 244 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 PCDHB18PQ96TA0 734 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 PSMB7Q99436 277 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 ELF4Q99607 663 aaPredicted RBP13.25□□□□□ -0.29
TREX1-203ENST00000456089 CCDC86Q9H6F5 360 aaKnown RBP13.25□□□□□ -0.29
TREX1-203ENST00000456089 MPP6Q9NZW5 540 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 FTSJ1Q9UET6 329 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 TMEM59LQ9UK28 342 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 TRPM6Q9BX84 2022 aa13.25□□□□□ -0.29
TREX1-203ENST00000456089 CHD5Q8TDI0 1954 aa13.24□□□□□ -0.29
TREX1-203ENST00000456089 SMAD6O43541 496 aaKnown RBP13.24□□□□□ -0.29
TREX1-203ENST00000456089 ATP9BO43861 1147 aa13.24□□□□□ -0.29
TREX1-203ENST00000456089 CLDN11O75508 207 aa13.24□□□□□ -0.29
TREX1-203ENST00000456089 ITGAVP06756 1048 aa13.24□□□□□ -0.29
TREX1-203ENST00000456089 CTSLP07711 333 aa13.24□□□□□ -0.29
TREX1-203ENST00000456089 RHOCP08134 193 aa13.24□□□□□ -0.29
TREX1-203ENST00000456089 SRCP12931 536 aa13.24□□□□□ -0.29
TREX1-203ENST00000456089 RRM1P23921 792 aa13.24□□□□□ -0.29
TREX1-203ENST00000456089 C1QBPQ07021 282 aaKnown RBP13.24□□□□□ -0.29
TREX1-203ENST00000456089 CDO1Q16878 200 aa13.24□□□□□ -0.29
TREX1-203ENST00000456089 RAB6CQ53S08 254 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms