RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 CA5BQ9Y2D0 317 aa11.97□□□□□ -0.49
HERC3-207ENST00000452979 SSUH2Q9Y2M2 353 aa11.97□□□□□ -0.49
HERC3-207ENST00000452979 PCDHB1Q9Y5F3 818 aa11.97□□□□□ -0.49
HERC3-207ENST00000452979 TDRD6O60522 2096 aaKnown RBP11.97□□□□□ -0.49
HERC3-207ENST00000452979 MGAQ8IWI9 3026 aa11.97□□□□□ -0.49
HERC3-207ENST00000452979 COL27A1Q8IZC6 1860 aaPredicted RBP11.96□□□□□ -0.49
HERC3-207ENST00000452979 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.96□□□□□ -0.49
HERC3-207ENST00000452979 PPP1R3GB7ZBB8 358 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 CLDN11O75508 207 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 PIAS2O75928 621 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 CTSLP07711 333 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 SRCP12931 536 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 KRT5P13647 590 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 PPP1R2P41236 205 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 UCNP55089 124 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 MARSP56192 900 aaKnown RBP11.96□□□□□ -0.49
HERC3-207ENST00000452979 PCBP4P57723 403 aaKnown RBP11.96□□□□□ -0.49
HERC3-207ENST00000452979 TMPRSS3P57727 454 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 CDK17Q00537 523 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 ZNF177Q13360 481 aaPredicted RBP11.96□□□□□ -0.49
HERC3-207ENST00000452979 PDCLQ13371 301 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 STIM1Q13586 685 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 CCDC40Q4G0X9 1142 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 EFHC1Q5JVL4 640 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 TTI2Q6NXR4 508 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 IGF2-ASQ6U949 168 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 C11orf57Q6ZUT1 292 aaPredicted RBP11.96□□□□□ -0.49
HERC3-207ENST00000452979 Q6ZVU0 165 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 ABI3BPQ7Z7G0 1075 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 HORMAD1Q86X24 394 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 DCP2Q8IU60 420 aaKnown RBP11.96□□□□□ -0.49
HERC3-207ENST00000452979 TRIM59Q8IWR1 403 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 OR2A12Q8NGT7 310 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 SNRNP27Q8WVK2 155 aaKnown RBP11.96□□□□□ -0.49
HERC3-207ENST00000452979 APOLD1Q96LR9 279 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 DEPDC7Q96QD5 511 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 LGMNQ99538 433 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 FAM204AQ9H8W3 233 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 GPR27Q9NS67 375 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 DDIT4Q9NX09 232 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 NLGN3Q9NZ94 848 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 VANGL2Q9ULK5 521 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 HS3ST4Q9Y661 456 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 HS3ST3A1Q9Y663 406 aa11.96□□□□□ -0.49
HERC3-207ENST00000452979 TENM4Q6N022 2769 aa11.96□□□□□ -0.5
HERC3-207ENST00000452979 LY6G6EA0A0G2JKS1 128 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 NEMP2A6NFY4 417 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 SCAMP1O15126 338 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 SLC31A1O15431 190 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 HSF2BPO75031 334 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 LETM1O95202 739 aaPredicted RBP11.95□□□□□ -0.5
HERC3-207ENST00000452979 MT-CO1P00395 513 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 MPOP05164 745 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 ALPPL2P10696 532 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 PRLRP16471 622 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 HNRNPA2B1P22626 353 aaKnown RBP11.95□□□□□ -0.5
HERC3-207ENST00000452979 AKT2P31751 481 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 CHRNA3P32297 505 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 IRAK1P51617 712 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 CDH4P55283 916 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 RHDQ02161 417 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 CENPCQ03188 943 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 STX1AQ16623 288 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 POM121L1PQ3SYA9 428 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 BROXQ5VW32 411 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 SMYD5Q6GMV2 418 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 SASS6Q6UVJ0 657 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 ENOSF1Q7L5Y1 443 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 TMC6Q7Z403 805 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 SLC22A18ASQ8N1D0 253 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 OR13H1Q8NG92 308 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 RNF34Q969K3 372 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 ARRDC3Q96B67 414 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 HDAC8Q9BY41 377 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 DPH1Q9BZG8 443 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 INTS2Q9H0H0 1204 aaKnown RBP11.95□□□□□ -0.5
HERC3-207ENST00000452979 POLR1BQ9H9Y6 1135 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 UBE2TQ9NPD8 197 aaPredicted RBP11.95□□□□□ -0.5
HERC3-207ENST00000452979 ACP6Q9NPH0 428 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 VPS28Q9UK41 221 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 CTNND2Q9UQB3 1225 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 U3KQA8 63 aa11.95□□□□□ -0.5
HERC3-207ENST00000452979 RNF103O00237 685 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 KPNA3O00505 521 aaPredicted RBP11.94□□□□□ -0.5
HERC3-207ENST00000452979 RIOK3O14730 519 aaKnown RBP11.94□□□□□ -0.5
HERC3-207ENST00000452979 FFAR2O15552 330 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 THAP12O43422 761 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 USP12O75317 370 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 CSO75390 466 aaKnown RBP11.94□□□□□ -0.5
HERC3-207ENST00000452979 PAGE1O75459 146 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 GNA14O95837 355 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 AFPP02771 609 aaKnown RBP11.94□□□□□ -0.5
HERC3-207ENST00000452979 PRNPP04156 253 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 GNA15P30679 374 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 DUSP3P51452 185 aaPredicted RBP11.94□□□□□ -0.5
HERC3-207ENST00000452979 GABREP78334 506 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 KRT83P78385 493 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 TMEM259Q4ZIN3 620 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 GCNT7Q6ZNI0 430 aa11.94□□□□□ -0.5
HERC3-207ENST00000452979 C14orf80Q86SX3 495 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms