RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 RAD17O75943 681 aa16.29■□□□□ 0.2
CNOT3-204ENST00000447684 LDHAP00338 332 aaKnown RBP16.29■□□□□ 0.2
CNOT3-204ENST00000447684 ARSAP15289 507 aa16.29■□□□□ 0.2
CNOT3-204ENST00000447684 CCNA2P20248 432 aa16.29■□□□□ 0.2
CNOT3-204ENST00000447684 CDH5P33151 784 aaPredicted RBP16.29■□□□□ 0.2
CNOT3-204ENST00000447684 GP5P40197 560 aa16.29■□□□□ 0.2
CNOT3-204ENST00000447684 GRM5P41594 1212 aa16.29■□□□□ 0.2
CNOT3-204ENST00000447684 OSTNP61366 133 aa16.29■□□□□ 0.2
CNOT3-204ENST00000447684 KRT76Q01546 638 aa16.29■□□□□ 0.2
CNOT3-204ENST00000447684 NFATC3Q12968 1075 aa16.29■□□□□ 0.2
CNOT3-204ENST00000447684 TREML2Q5T2D2 321 aa16.29■□□□□ 0.2
CNOT3-204ENST00000447684 IGFN1Q86VF2 1251 aa16.29■□□□□ 0.2
CNOT3-204ENST00000447684 SNX29P2Q8IUI4 249 aa16.29■□□□□ 0.2
CNOT3-204ENST00000447684 CDKL3Q8IVW4 592 aaPredicted RBP16.29■□□□□ 0.2
CNOT3-204ENST00000447684 CANT1Q8WVQ1 401 aa16.29■□□□□ 0.2
CNOT3-204ENST00000447684 KCNN1Q92952 543 aa16.29■□□□□ 0.2
CNOT3-204ENST00000447684 ACDQ96AP0 544 aa16.29■□□□□ 0.2
CNOT3-204ENST00000447684 SGF29Q96ES7 293 aa16.29■□□□□ 0.2
CNOT3-204ENST00000447684 UNKQ9C0B0 810 aaKnown RBP16.29■□□□□ 0.2
CNOT3-204ENST00000447684 TASP1Q9H6P5 420 aa16.29■□□□□ 0.2
CNOT3-204ENST00000447684 SEPT10Q9P0V9 454 aa16.29■□□□□ 0.2
CNOT3-204ENST00000447684 RAP2CQ9Y3L5 183 aa16.29■□□□□ 0.2
CNOT3-204ENST00000447684 PRORSD1PA6NEY8 169 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 TMEM114B3SHH9 223 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 AQP9O43315 295 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 TADA2AO75478 443 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 NR4A1P22736 598 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 IL4RP24394 825 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 CSE1LP55060 971 aaKnown RBP16.28■□□□□ 0.2
CNOT3-204ENST00000447684 FSTL1Q12841 308 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 PDK2Q15119 407 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 ZNF618Q5T7W0 954 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 HEATR6Q6AI08 1181 aaKnown RBP16.28■□□□□ 0.2
CNOT3-204ENST00000447684 TMEM130Q8N3G9 435 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 RTP4Q96DX8 246 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 CCDC138Q96M89 665 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 SLC39A3Q9BRY0 314 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 HERC2P3Q9BVR0 1158 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 SOX17Q9H6I2 414 aaPredicted RBP16.28■□□□□ 0.2
CNOT3-204ENST00000447684 ZFYVE28Q9HCC9 887 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 SYBUQ9NX95 663 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 TUBA8Q9NY65 449 aaPredicted RBP16.28■□□□□ 0.2
CNOT3-204ENST00000447684 CCDC167Q9P0B6 97 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 PCDHGA7Q9Y5G6 932 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 KLRG2A4D1S0 409 aaPredicted RBP16.28■□□□□ 0.2
CNOT3-204ENST00000447684 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.28■□□□□ 0.2
CNOT3-204ENST00000447684 CLOCKO15516 846 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 GRID2O43424 1007 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 PABPC1P11940 636 aaKnown RBP16.28■□□□□ 0.2
CNOT3-204ENST00000447684 DCKP27707 260 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 SLC7A1P30825 629 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 ZNF143P52747 638 aaPredicted RBP16.28■□□□□ 0.2
CNOT3-204ENST00000447684 PLCL1Q15111 1095 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 BCL2A1Q16548 175 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 SLC27A3Q5K4L6 730 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 SLFN12LQ6IEE8 588 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 BPIFB6Q8NFQ5 453 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 MUC3BQ9H195 1237 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 VPS33BQ9H267 617 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 STYXL1Q9Y6J8 313 aa16.28■□□□□ 0.2
CNOT3-204ENST00000447684 H0YCG3 227 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 KPNA4O00629 521 aaPredicted RBP16.27■□□□□ 0.2
CNOT3-204ENST00000447684 MED7O43513 233 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 TPSB2P20231 275 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 TGM2P21980 687 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 NME5P56597 212 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 PRKCEQ02156 737 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 BFSP2Q13515 415 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 OLIG2Q13516 323 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 TPSAB1Q15661 275 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 CYP4V2Q6ZWL3 525 aaPredicted RBP16.27■□□□□ 0.2
CNOT3-204ENST00000447684 EEPD1Q7L9B9 569 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 BTLAQ7Z6A9 289 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 ZNF420Q8TAQ5 688 aaPredicted RBP16.27■□□□□ 0.2
CNOT3-204ENST00000447684 TCF12Q99081 682 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 AGAP2Q99490 1192 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 CNPY3Q9BT09 278 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 MAGEB5Q9BZ81 275 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 UPF3AQ9H1J1 476 aaKnown RBP16.27■□□□□ 0.2
CNOT3-204ENST00000447684 MTMR10Q9NXD2 777 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 SUCOQ9UBS9 1254 aaKnown RBP16.27■□□□□ 0.2
CNOT3-204ENST00000447684 IPO11Q9UI26 975 aaKnown RBP16.27■□□□□ 0.2
CNOT3-204ENST00000447684 TRPC5Q9UL62 973 aaPredicted RBP16.27■□□□□ 0.2
CNOT3-204ENST00000447684 DGKBQ9Y6T7 804 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 LY75O60449 1722 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 CLASP2O75122 1294 aaKnown RBP16.27■□□□□ 0.2
CNOT3-204ENST00000447684 EDN1P05305 212 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 EEF1DP29692 281 aaKnown RBP16.27■□□□□ 0.2
CNOT3-204ENST00000447684 CA8P35219 290 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 MAGEA6P43360 314 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 TGFB2P61812 414 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 MERTKQ12866 999 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 FSTL4Q6MZW2 842 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 TRNP1Q6NT89 227 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 CNTD1Q8N815 330 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 ATP6V0A1Q93050 837 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 RMDN3Q96TC7 470 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 TPK1Q9H3S4 243 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 PRDM16Q9HAZ2 1276 aa16.27■□□□□ 0.2
CNOT3-204ENST00000447684 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms