RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 RETREG1Q9H6L5 497 aa14.15□□□□□ -0.14
PTPRE-203ENST00000442830 KLHL11Q9NVR0 708 aa14.15□□□□□ -0.14
PTPRE-203ENST00000442830 ARHGEF38Q9NXL2 777 aa14.15□□□□□ -0.14
PTPRE-203ENST00000442830 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.15□□□□□ -0.14
PTPRE-203ENST00000442830 KIAA1468Q9P260 1216 aa14.15□□□□□ -0.14
PTPRE-203ENST00000442830 AK5Q9Y6K8 562 aa14.15□□□□□ -0.14
PTPRE-203ENST00000442830 TDRD6O60522 2096 aaKnown RBP14.14□□□□□ -0.15
PTPRE-203ENST00000442830 NEMP2A6NFY4 417 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 SRCP12931 536 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 SLC9A1P19634 815 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 HNRNPA2B1P22626 353 aaKnown RBP14.14□□□□□ -0.15
PTPRE-203ENST00000442830 PON1P27169 355 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 MAT2AP31153 395 aaKnown RBP14.14□□□□□ -0.15
PTPRE-203ENST00000442830 CHRNA3P32297 505 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 ACTN2P35609 894 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 ETFBP38117 255 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 CXCR3P49682 368 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 DNAJC3Q13217 504 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 MAN2A1Q16706 1144 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 RETSATQ6NUM9 610 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 HORMAD1Q86X24 394 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 SPATS2Q86XZ4 545 aaKnown RBP14.14□□□□□ -0.15
PTPRE-203ENST00000442830 CREBRFQ8IUR6 639 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 PASD1Q8IV76 773 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 WDTC1Q8N5D0 677 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 MLKLQ8NB16 471 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 LSM14AQ8ND56 463 aaKnown RBP14.14□□□□□ -0.15
PTPRE-203ENST00000442830 NPY6RQ99463 290 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 DUSP23Q9BVJ7 150 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 HDAC8Q9BY41 377 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 CEP44Q9C0F1 390 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 TKTL2Q9H0I9 626 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 PDCL3Q9H2J4 239 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 NCKIPSDQ9NZQ3 722 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 SARDHQ9UL12 918 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 CLCA2Q9UQC9 943 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 PTPRQQ9UMZ3 2332 aa14.14□□□□□ -0.15
PTPRE-203ENST00000442830 KPNA3O00505 521 aaPredicted RBP14.13□□□□□ -0.15
PTPRE-203ENST00000442830 WNT9AO14904 365 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 GRAP2O75791 330 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 LSM8O95777 96 aaKnown RBP14.13□□□□□ -0.15
PTPRE-203ENST00000442830 ERBB2P04626 1255 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 THEGLP0DJG4 465 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 GLDCP23378 1020 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 CDH5P33151 784 aaPredicted RBP14.13□□□□□ -0.15
PTPRE-203ENST00000442830 EIF2S3P41091 472 aaKnown RBP14.13□□□□□ -0.15
PTPRE-203ENST00000442830 GABRB2P47870 512 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 DUSP3P51452 185 aaPredicted RBP14.13□□□□□ -0.15
PTPRE-203ENST00000442830 DAB2P98082 770 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 DEUP1Q05D60 604 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 KCNMA1Q12791 1236 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 BNIP3Q12983 259 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 TARDBPQ13148 414 aaKnown RBP eCLIP14.13□□□□□ -0.15
PTPRE-203ENST00000442830 PROX2Q3B8N5 592 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 SLC25A52Q3SY17 297 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 PTPN20Q4JDL3 420 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 PRAMEF14Q5SWL7 426 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 PIP5KL1Q5T9C9 394 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 KIAA1161Q6NSJ0 714 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 ARCQ7LC44 396 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 OR4C6Q8NH72 309 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 NT5C3BQ969T7 300 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 DCBLD2Q96PD2 775 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 HAPLN3Q96S86 360 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 SIK2Q9H0K1 926 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 ACP6Q9NPH0 428 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 IL36AQ9UHA7 158 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 DACH1Q9UI36 760 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 VPS51Q9UID3 782 aa14.13□□□□□ -0.15
PTPRE-203ENST00000442830 SMG1Q96Q15 3661 aaKnown RBP14.12□□□□□ -0.15
PTPRE-203ENST00000442830 IGLV3-10A0A075B6K4 115 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 A0A1W2PQU0 124 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 ILVBLA1L0T0 632 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 DRGXA6NNA5 263 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 A6NNZ2 444 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 H3BM21 787 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 BNIP3LO60238 219 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 GP1BAP07359 652 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 OR1E1P30953 314 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 SULT1E1P49888 294 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 NEK3P51956 506 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 GEMIN4P57678 1058 aaKnown RBP14.12□□□□□ -0.15
PTPRE-203ENST00000442830 HNRNPKP61978 463 aaKnown RBP eCLIP14.12□□□□□ -0.15
PTPRE-203ENST00000442830 UBE2HP62256 183 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 RPS21P63220 83 aaKnown RBP14.12□□□□□ -0.15
PTPRE-203ENST00000442830 C22orf39Q6P5X5 142 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 GJB7Q6PEY0 223 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 ERN2Q76MJ5 926 aaKnown RBP14.12□□□□□ -0.15
PTPRE-203ENST00000442830 FAM71AQ8IYT1 594 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 LSMEM2Q8N112 164 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 PCDH20Q8N6Y1 951 aaKnown RBP14.12□□□□□ -0.15
PTPRE-203ENST00000442830 DCBLD1Q8N8Z6 715 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 OR2A12Q8NGT7 310 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 FGF11Q92914 225 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 C18orf8Q96DM3 657 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 PIGVQ9NUD9 493 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 NLGN3Q9NZ94 848 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 DNAJC12Q9UKB3 198 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 HS3ST3A1Q9Y663 406 aa14.12□□□□□ -0.15
PTPRE-203ENST00000442830 CHD5Q8TDI0 1954 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms