RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 CSPG4P5Q96PW8 444 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 FAM129BQ96TA1 746 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 DUSP15Q9H1R2 295 aaPredicted RBP12.07□□□□□ -0.48
HSPG2-206ENST00000439717 MTG2Q9H4K7 406 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 INVSQ9Y283 1065 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 FARP1Q9Y4F1 1045 aaPredicted RBP12.07□□□□□ -0.48
HSPG2-206ENST00000439717 VPS13AQ96RL7 3174 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 ARHGAP42A6NI28 874 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 K7ERQ8 282 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 MCF2LO15068 1137 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 PJA2O43164 708 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 BUB1O43683 1085 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 GFRA3O60609 400 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 ADH1BP00325 375 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 VAV1P15498 845 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 BCKDHBP21953 392 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 CD6P30203 668 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 MRE11P49959 708 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 TPMTP51580 245 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 VAV2P52735 878 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 CST6Q15828 149 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 TTC31Q49AM3 519 aaPredicted RBP12.06□□□□□ -0.48
HSPG2-206ENST00000439717 PMS2CLQ68D20 193 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 C22orf39Q6P5X5 142 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 TMCO3Q6UWJ1 677 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 Q6ZVU0 165 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 USP30Q70CQ3 517 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 LPCAT2Q7L5N7 544 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 ZNF354CQ86Y25 554 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 CPNE8Q86YQ8 564 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 PLPP6Q8IY26 295 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 STK40Q8N2I9 435 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 PCDH20Q8N6Y1 951 aaKnown RBP12.06□□□□□ -0.48
HSPG2-206ENST00000439717 KCTD6Q8NC69 237 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 CCDC112Q8NEF3 446 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 OR8D1Q8WZ84 308 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 RUBCNQ92622 972 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 HMCESQ96FZ2 354 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 ZNF670Q9BS34 389 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 SLC39A8Q9C0K1 460 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 KLC2Q9H0B6 622 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 PABPC3Q9H361 631 aaKnown RBP12.06□□□□□ -0.48
HSPG2-206ENST00000439717 MBD1Q9UIS9 605 aaPredicted RBP12.06□□□□□ -0.48
HSPG2-206ENST00000439717 GMEB2Q9UKD1 530 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 CYP8B1Q9UNU6 501 aa12.06□□□□□ -0.48
HSPG2-206ENST00000439717 REXO2Q9Y3B8 237 aaKnown RBP12.06□□□□□ -0.48
HSPG2-206ENST00000439717 PLXND1Q9Y4D7 1925 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 EML5Q05BV3 1969 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 CHD5Q8TDI0 1954 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 ZNF487B1APH4 448 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 SMAD6O43541 496 aaKnown RBP12.05□□□□□ -0.48
HSPG2-206ENST00000439717 BUB1BO60566 1050 aaPredicted RBP12.05□□□□□ -0.48
HSPG2-206ENST00000439717 CD160O95971 181 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 RETP07949 1114 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 C5AR1P21730 350 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 COMTP21964 271 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 AMPD1P23109 780 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 IL4RP24394 825 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 SERPINB6P35237 376 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 GJC1P36383 396 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 RECQLP46063 649 aaPredicted RBP12.05□□□□□ -0.48
HSPG2-206ENST00000439717 DPYSL3Q14195 570 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 LPAL2Q16609 132 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 ATP13A4Q4VNC1 1196 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 INO80DQ53TQ3 878 aaPredicted RBP12.05□□□□□ -0.48
HSPG2-206ENST00000439717 FAM46CQ5VWP2 391 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 C11orf63Q6NUN7 778 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 KIAA1328Q86T90 577 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 VSIG1Q86XK7 387 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 MMAAQ8IVH4 418 aaKnown RBP12.05□□□□□ -0.48
HSPG2-206ENST00000439717 ARHGAP12Q8IWW6 846 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 RHOT1Q8IXI2 618 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 FRMD1Q8N878 549 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 ACRBPQ8NEB7 543 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 OR2A12Q8NGT7 310 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 CELF6Q96J87 481 aaKnown RBP12.05□□□□□ -0.48
HSPG2-206ENST00000439717 DDX56Q9NY93 547 aaKnown RBP12.05□□□□□ -0.48
HSPG2-206ENST00000439717 WSB2Q9NYS7 404 aaPredicted RBP12.05□□□□□ -0.48
HSPG2-206ENST00000439717 NCDNQ9UBB6 729 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 PPM1HQ9ULR3 514 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 TFR2Q9UP52 801 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 NCKAP1Q9Y2A7 1128 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 PCDHGA5Q9Y5G8 931 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 ALG6Q9Y672 507 aa12.05□□□□□ -0.48
HSPG2-206ENST00000439717 RCCD1A6NED2 376 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 C1QTNF3-AMACRE9PGA6 284 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 MID1O15344 667 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 PSTPIP1O43586 416 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 SPOPO43791 374 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 PRAMEF11O60813 436 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 LRP3O75074 770 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 NDUFS2O75306 463 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 ZNF821O75541 412 aaPredicted RBP12.04□□□□□ -0.48
HSPG2-206ENST00000439717 EPN2O95208 641 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 GSRP00390 522 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 IL1BP01584 269 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 CD48P09326 243 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 KDELR1P24390 212 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 SLC8A1P32418 973 aa12.04□□□□□ -0.48
HSPG2-206ENST00000439717 DPP6P42658 865 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms