RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 PYROXD2Q8N2H3 581 aa25.29■■□□□ 1.64
RAPGEF1-206ENST00000438647 HDDC3Q8N4P3 179 aa25.29■■□□□ 1.64
RAPGEF1-206ENST00000438647 ACE2Q9BYF1 805 aaPredicted RBP25.29■■□□□ 1.64
RAPGEF1-206ENST00000438647 MAGEB5Q9BZ81 275 aa25.29■■□□□ 1.64
RAPGEF1-206ENST00000438647 C6orf106Q9H6K1 298 aaPredicted RBP25.29■■□□□ 1.64
RAPGEF1-206ENST00000438647 CAPN10Q9HC96 672 aa25.29■■□□□ 1.64
RAPGEF1-206ENST00000438647 HPCAL4Q9UM19 191 aa25.29■■□□□ 1.64
RAPGEF1-206ENST00000438647 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.29■■□□□ 1.64
RAPGEF1-206ENST00000438647 A0A087X0T9 212 aa25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 A0A1B0GTW7 788 aa25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 LRRC72A6NJI9 287 aa25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 FGF10O15520 208 aaPredicted RBP25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 BNIP3LO60238 219 aa25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 PRPSAP2O60256 369 aa25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 SYPP08247 313 aa25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 FAM228BP0C875 321 aa25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 GOT1P17174 413 aa25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 ENGP17813 658 aa25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 GLDCP23378 1020 aa25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 RECQLP46063 649 aaPredicted RBP25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 ATXN3P54252 364 aaPredicted RBP25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 FOXK2Q01167 660 aa25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 ACAP1Q15027 740 aa25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 DAB2IPQ5VWQ8 1189 aa25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 ALKBH5Q6P6C2 394 aaKnown RBP25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 VSTM4Q8IW00 320 aa25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 RTL3Q8N8U3 475 aaKnown RBP25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 OR8K1Q8NGG5 319 aa25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 SNX19Q92543 992 aa25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 CEP44Q9C0F1 390 aa25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 MIR1-1HGQ9H1L0 117 aa25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 NEUROG2Q9H2A3 272 aa25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 NDFIP2Q9NV92 336 aa25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 ZNHIT6Q9NWK9 470 aaKnown RBP25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 ARHGAP20Q9P2F6 1191 aa25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 SERGEFQ9UGK8 458 aa25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 AP4E1Q9UPM8 1137 aa25.28■■□□□ 1.64
RAPGEF1-206ENST00000438647 NUMA1Q14980 2115 aa25.27■■□□□ 1.64
RAPGEF1-206ENST00000438647 ZMPSTE24O75844 475 aa25.27■■□□□ 1.64
RAPGEF1-206ENST00000438647 SERPINH1P50454 418 aaKnown RBP25.27■■□□□ 1.64
RAPGEF1-206ENST00000438647 ZNF252P-AS1Q0IIN9 211 aa25.27■■□□□ 1.64
RAPGEF1-206ENST00000438647 SEMA3BQ13214 749 aa25.27■■□□□ 1.64
RAPGEF1-206ENST00000438647 POLD3Q15054 466 aaPredicted RBP25.27■■□□□ 1.64
RAPGEF1-206ENST00000438647 ERMARDQ5T6L9 678 aa25.27■■□□□ 1.64
RAPGEF1-206ENST00000438647 C22orf39Q6P5X5 142 aa25.27■■□□□ 1.64
RAPGEF1-206ENST00000438647 PSTKQ8IV42 348 aaKnown RBP25.27■■□□□ 1.64
RAPGEF1-206ENST00000438647 AADATQ8N5Z0 425 aa25.27■■□□□ 1.64
RAPGEF1-206ENST00000438647 ARHGEF2Q92974 986 aaKnown RBP25.27■■□□□ 1.64
RAPGEF1-206ENST00000438647 TRIM7Q9C029 511 aa25.27■■□□□ 1.64
RAPGEF1-206ENST00000438647 EIF2B4Q9UI10 523 aaKnown RBP25.27■■□□□ 1.64
RAPGEF1-206ENST00000438647 PPM1HQ9ULR3 514 aa25.27■■□□□ 1.64
RAPGEF1-206ENST00000438647 NYNRINQ9P2P1 1898 aaKnown RBP25.27■■□□□ 1.64
RAPGEF1-206ENST00000438647 DCDC2BA2VCK2 349 aa25.26■■□□□ 1.63
RAPGEF1-206ENST00000438647 C4orf47A7E2U8 309 aa25.26■■□□□ 1.63
RAPGEF1-206ENST00000438647 K7ERQ8 282 aa25.26■■□□□ 1.63
RAPGEF1-206ENST00000438647 ACVRL1P37023 503 aa25.26■■□□□ 1.63
RAPGEF1-206ENST00000438647 TPI1P60174 286 aa25.26■■□□□ 1.63
RAPGEF1-206ENST00000438647 ARF5P84085 180 aa25.26■■□□□ 1.63
RAPGEF1-206ENST00000438647 CCDC122Q5T0U0 273 aa25.26■■□□□ 1.63
RAPGEF1-206ENST00000438647 ZCCHC9Q8N567 271 aaKnown RBP25.26■■□□□ 1.63
RAPGEF1-206ENST00000438647 PCDH20Q8N6Y1 951 aaKnown RBP25.26■■□□□ 1.63
RAPGEF1-206ENST00000438647 OR2A12Q8NGT7 310 aa25.26■■□□□ 1.63
RAPGEF1-206ENST00000438647 OR2T34Q8NGX1 318 aa25.26■■□□□ 1.63
RAPGEF1-206ENST00000438647 PIP4K2CQ8TBX8 421 aa25.26■■□□□ 1.63
RAPGEF1-206ENST00000438647 DNAJC7Q99615 494 aa25.26■■□□□ 1.63
RAPGEF1-206ENST00000438647 THAP2Q9H0W7 228 aa25.26■■□□□ 1.63
RAPGEF1-206ENST00000438647 PCSK1NQ9UHG2 260 aa25.26■■□□□ 1.63
RAPGEF1-206ENST00000438647 TPX2Q9ULW0 747 aaKnown RBP25.26■■□□□ 1.63
RAPGEF1-206ENST00000438647 ZSCAN5CA6NGD5 496 aaPredicted RBP25.25■■□□□ 1.63
RAPGEF1-206ENST00000438647 FAM47DPA6NHR8 397 aa25.25■■□□□ 1.63
RAPGEF1-206ENST00000438647 WASH4PA8MWX3 477 aa25.25■■□□□ 1.63
RAPGEF1-206ENST00000438647 ARHGAP33O14559 1287 aa25.25■■□□□ 1.63
RAPGEF1-206ENST00000438647 CDX4O14627 284 aaPredicted RBP25.25■■□□□ 1.63
RAPGEF1-206ENST00000438647 BCAT2O15382 392 aaPredicted RBP25.25■■□□□ 1.63
RAPGEF1-206ENST00000438647 SLC7A4O43246 635 aa25.25■■□□□ 1.63
RAPGEF1-206ENST00000438647 SMAD6O43541 496 aaKnown RBP25.25■■□□□ 1.63
RAPGEF1-206ENST00000438647 FSBPO95073 299 aa25.25■■□□□ 1.63
RAPGEF1-206ENST00000438647 MIPP30301 263 aa25.25■■□□□ 1.63
RAPGEF1-206ENST00000438647 PCK1P35558 622 aa25.25■■□□□ 1.63
RAPGEF1-206ENST00000438647 GALCP54803 685 aa25.25■■□□□ 1.63
RAPGEF1-206ENST00000438647 YBEYP58557 167 aaPredicted RBP25.25■■□□□ 1.63
RAPGEF1-206ENST00000438647 KIAA0895LQ68EN5 471 aa25.25■■□□□ 1.63
RAPGEF1-206ENST00000438647 BIRC7Q96CA5 298 aa25.25■■□□□ 1.63
RAPGEF1-206ENST00000438647 ZDHHC5Q9C0B5 715 aa25.25■■□□□ 1.63
RAPGEF1-206ENST00000438647 DHX35Q9H5Z1 703 aaKnown RBP25.25■■□□□ 1.63
RAPGEF1-206ENST00000438647 LRCH4O75427 683 aa25.24■■□□□ 1.63
RAPGEF1-206ENST00000438647 PRNPP04156 253 aa25.24■■□□□ 1.63
RAPGEF1-206ENST00000438647 CD27P26842 260 aa25.24■■□□□ 1.63
RAPGEF1-206ENST00000438647 CHRNA3P32297 505 aa25.24■■□□□ 1.63
RAPGEF1-206ENST00000438647 DRD3P35462 400 aa25.24■■□□□ 1.63
RAPGEF1-206ENST00000438647 MAPK8P45983 427 aa25.24■■□□□ 1.63
RAPGEF1-206ENST00000438647 ZNF135P52742 658 aaPredicted RBP25.24■■□□□ 1.63
RAPGEF1-206ENST00000438647 ADPRHP54922 357 aa25.24■■□□□ 1.63
RAPGEF1-206ENST00000438647 CCDC15Q0P6D6 951 aa25.24■■□□□ 1.63
RAPGEF1-206ENST00000438647 PIGHQ14442 188 aaPredicted RBP25.24■■□□□ 1.63
RAPGEF1-206ENST00000438647 PARP15Q460N3 678 aa25.24■■□□□ 1.63
RAPGEF1-206ENST00000438647 NCEH1Q6PIU2 408 aa25.24■■□□□ 1.63
RAPGEF1-206ENST00000438647 ZNF354CQ86Y25 554 aa25.24■■□□□ 1.63
RAPGEF1-206ENST00000438647 ARFGAP1Q8N6T3 406 aa25.24■■□□□ 1.63
RAPGEF1-206ENST00000438647 TMIEQ8NEW7 156 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms