RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 RETSATQ6NUM9 610 aa16.5■□□□□ 0.23
SNRPB-202ENST00000438552 C22orf39Q6P5X5 142 aa16.5■□□□□ 0.23
SNRPB-202ENST00000438552 Q6ZVU0 165 aa16.5■□□□□ 0.23
SNRPB-202ENST00000438552 RASSF3Q86WH2 238 aa16.5■□□□□ 0.23
SNRPB-202ENST00000438552 FRS2Q8WU20 508 aa16.5■□□□□ 0.23
SNRPB-202ENST00000438552 NELL1Q92832 810 aa16.5■□□□□ 0.23
SNRPB-202ENST00000438552 RNF25Q96BH1 459 aaPredicted RBP16.5■□□□□ 0.23
SNRPB-202ENST00000438552 PRSS16Q9NQE7 514 aa16.5■□□□□ 0.23
SNRPB-202ENST00000438552 FAM86C1Q9NVL1 165 aa16.5■□□□□ 0.23
SNRPB-202ENST00000438552 HPCAL4Q9UM19 191 aa16.5■□□□□ 0.23
SNRPB-202ENST00000438552 ARHGAP42A6NI28 874 aa16.49■□□□□ 0.23
SNRPB-202ENST00000438552 AXIN1O15169 862 aa16.49■□□□□ 0.23
SNRPB-202ENST00000438552 KDELR3O43731 214 aa16.49■□□□□ 0.23
SNRPB-202ENST00000438552 CD160O95971 181 aa16.49■□□□□ 0.23
SNRPB-202ENST00000438552 CTNNA1P35221 906 aaKnown RBP16.49■□□□□ 0.23
SNRPB-202ENST00000438552 SERPINB6P35237 376 aa16.49■□□□□ 0.23
SNRPB-202ENST00000438552 VASPP50552 380 aaPredicted RBP16.49■□□□□ 0.23
SNRPB-202ENST00000438552 NRLP54845 237 aa16.49■□□□□ 0.23
SNRPB-202ENST00000438552 CCDC173Q0VFZ6 552 aa16.49■□□□□ 0.23
SNRPB-202ENST00000438552 DLG2Q15700 870 aa16.49■□□□□ 0.23
SNRPB-202ENST00000438552 C9orf64Q5T6V5 341 aa16.49■□□□□ 0.23
SNRPB-202ENST00000438552 MFSD7Q6UXD7 560 aa16.49■□□□□ 0.23
SNRPB-202ENST00000438552 KIAA1324Q6UXG2 1013 aaKnown RBP16.49■□□□□ 0.23
SNRPB-202ENST00000438552 ARHGAP36Q6ZRI8 547 aa16.49■□□□□ 0.23
SNRPB-202ENST00000438552 NT5DC3Q86UY8 548 aa16.49■□□□□ 0.23
SNRPB-202ENST00000438552 WDR5BQ86VZ2 330 aa16.49■□□□□ 0.23
SNRPB-202ENST00000438552 KATNAL2Q8IYT4 538 aa16.49■□□□□ 0.23
SNRPB-202ENST00000438552 PGBD3Q8N328 593 aa16.49■□□□□ 0.23
SNRPB-202ENST00000438552 PQLC3Q8N755 202 aa16.49■□□□□ 0.23
SNRPB-202ENST00000438552 MRGPRX1Q96LB2 322 aa16.49■□□□□ 0.23
SNRPB-202ENST00000438552 FAM126AQ9BYI3 521 aaPredicted RBP16.49■□□□□ 0.23
SNRPB-202ENST00000438552 MKRN2Q9H000 416 aaKnown RBP16.49■□□□□ 0.23
SNRPB-202ENST00000438552 TNKS2Q9H2K2 1166 aa16.49■□□□□ 0.23
SNRPB-202ENST00000438552 ZSCAN32Q9NX65 697 aa16.49■□□□□ 0.23
SNRPB-202ENST00000438552 EBF1Q9UH73 591 aa16.49■□□□□ 0.23
SNRPB-202ENST00000438552 SUN2Q9UH99 717 aa16.49■□□□□ 0.23
SNRPB-202ENST00000438552 PACSIN2Q9UNF0 486 aaPredicted RBP16.49■□□□□ 0.23
SNRPB-202ENST00000438552 FCF1Q9Y324 198 aaKnown RBP16.49■□□□□ 0.23
SNRPB-202ENST00000438552 R4GN57 208 aa16.49■□□□□ 0.23
SNRPB-202ENST00000438552 VPS13AQ96RL7 3174 aa16.48■□□□□ 0.23
SNRPB-202ENST00000438552 ZNF487B1APH4 448 aa16.48■□□□□ 0.23
SNRPB-202ENST00000438552 J3KR12 359 aa16.48■□□□□ 0.23
SNRPB-202ENST00000438552 BNIP3LO60238 219 aa16.48■□□□□ 0.23
SNRPB-202ENST00000438552 MAP3K6O95382 1288 aa16.48■□□□□ 0.23
SNRPB-202ENST00000438552 SRSF5Q13243 272 aaKnown RBP16.48■□□□□ 0.23
SNRPB-202ENST00000438552 PEX26Q7Z412 305 aa16.48■□□□□ 0.23
SNRPB-202ENST00000438552 LONP2Q86WA8 852 aa16.48■□□□□ 0.23
SNRPB-202ENST00000438552 RFX6Q8HWS3 928 aa16.48■□□□□ 0.23
SNRPB-202ENST00000438552 SYCE1Q8N0S2 351 aa16.48■□□□□ 0.23
SNRPB-202ENST00000438552 STK40Q8N2I9 435 aa16.48■□□□□ 0.23
SNRPB-202ENST00000438552 RNF10Q8N5U6 811 aaKnown RBP16.48■□□□□ 0.23
SNRPB-202ENST00000438552 LZTR1Q8N653 840 aa16.48■□□□□ 0.23
SNRPB-202ENST00000438552 OR2T3Q8NH03 318 aa16.48■□□□□ 0.23
SNRPB-202ENST00000438552 PTPRN2Q92932 1015 aa16.48■□□□□ 0.23
SNRPB-202ENST00000438552 RNF157Q96PX1 679 aa16.48■□□□□ 0.23
SNRPB-202ENST00000438552 PDFQ9HBH1 243 aa16.48■□□□□ 0.23
SNRPB-202ENST00000438552 CD93Q9NPY3 652 aa16.48■□□□□ 0.23
SNRPB-202ENST00000438552 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.48■□□□□ 0.23
SNRPB-202ENST00000438552 CACNA1HO95180 2353 aa16.48■□□□□ 0.23
SNRPB-202ENST00000438552 ZSCAN5CA6NGD5 496 aaPredicted RBP16.47■□□□□ 0.23
SNRPB-202ENST00000438552 PRAMEF11O60813 436 aa16.47■□□□□ 0.23
SNRPB-202ENST00000438552 TMCC1O94876 653 aa16.47■□□□□ 0.23
SNRPB-202ENST00000438552 CTNNA2P26232 953 aa16.47■□□□□ 0.23
SNRPB-202ENST00000438552 CDKN2BP42772 138 aa16.47■□□□□ 0.23
SNRPB-202ENST00000438552 CLCN6P51797 869 aa16.47■□□□□ 0.23
SNRPB-202ENST00000438552 GEMIN4P57678 1058 aaKnown RBP16.47■□□□□ 0.23
SNRPB-202ENST00000438552 DYNLT1P63172 113 aa16.47■□□□□ 0.23
SNRPB-202ENST00000438552 PAFAH1B3Q15102 231 aaKnown RBP16.47■□□□□ 0.23
SNRPB-202ENST00000438552 LLGL1Q15334 1064 aa16.47■□□□□ 0.23
SNRPB-202ENST00000438552 SPOCD1Q6ZMY3 1216 aa16.47■□□□□ 0.23
SNRPB-202ENST00000438552 ZNF662Q6ZS27 426 aa16.47■□□□□ 0.23
SNRPB-202ENST00000438552 VSIG1Q86XK7 387 aa16.47■□□□□ 0.23
SNRPB-202ENST00000438552 TMPRSS6Q8IU80 811 aa16.47■□□□□ 0.23
SNRPB-202ENST00000438552 CCDC50Q8IVM0 306 aa16.47■□□□□ 0.23
SNRPB-202ENST00000438552 ZBTB44Q8NCP5 570 aa16.47■□□□□ 0.23
SNRPB-202ENST00000438552 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.47■□□□□ 0.23
SNRPB-202ENST00000438552 ALG3Q92685 438 aa16.47■□□□□ 0.23
SNRPB-202ENST00000438552 ATOH1Q92858 354 aaPredicted RBP16.47■□□□□ 0.23
SNRPB-202ENST00000438552 TM6SF2Q9BZW4 377 aa16.47■□□□□ 0.23
SNRPB-202ENST00000438552 FBRSQ9HAH7 460 aa16.47■□□□□ 0.23
SNRPB-202ENST00000438552 PRDM16Q9HAZ2 1276 aa16.47■□□□□ 0.23
SNRPB-202ENST00000438552 SP110Q9HB58 689 aa16.47■□□□□ 0.23
SNRPB-202ENST00000438552 UBA2Q9UBT2 640 aaPredicted RBP16.47■□□□□ 0.23
SNRPB-202ENST00000438552 AMFRQ9UKV5 643 aa16.47■□□□□ 0.23
SNRPB-202ENST00000438552 INVSQ9Y283 1065 aa16.47■□□□□ 0.23
SNRPB-202ENST00000438552 PCDHGA2Q9Y5H1 932 aa16.47■□□□□ 0.23
SNRPB-202ENST00000438552 PCDHA3Q9Y5H8 950 aa16.47■□□□□ 0.23
SNRPB-202ENST00000438552 CCDC163A0A0D9SF12 145 aa16.46■□□□□ 0.23
SNRPB-202ENST00000438552 TARSL2A2RTX5 802 aaKnown RBP16.46■□□□□ 0.23
SNRPB-202ENST00000438552 CCDC66A2RUB6 948 aa16.46■□□□□ 0.23
SNRPB-202ENST00000438552 APOL1O14791 398 aa16.46■□□□□ 0.23
SNRPB-202ENST00000438552 ZBTB24O43167 697 aaPredicted RBP16.46■□□□□ 0.23
SNRPB-202ENST00000438552 KRT10P13645 584 aa16.46■□□□□ 0.23
SNRPB-202ENST00000438552 DNA2P51530 1060 aa16.46■□□□□ 0.23
SNRPB-202ENST00000438552 GBE1Q04446 702 aa16.46■□□□□ 0.23
SNRPB-202ENST00000438552 SLC20A2Q08357 652 aa16.46■□□□□ 0.23
SNRPB-202ENST00000438552 ELAVL3Q14576 367 aaKnown RBP16.46■□□□□ 0.23
SNRPB-202ENST00000438552 KAZNQ674X7 775 aa16.46■□□□□ 0.23
SNRPB-202ENST00000438552 ZNF776Q68DI1 518 aaPredicted RBP16.46■□□□□ 0.23
SNRPB-202ENST00000438552 SLC9A4Q6AI14 798 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms