RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 KCNK16Q96T55 309 aa8.23□□□□□ -1.09
VTI1A-202ENST00000432306 PARK7Q99497 189 aaKnown RBP8.23□□□□□ -1.09
VTI1A-202ENST00000432306 IQCGQ9H095 443 aaKnown RBP8.23□□□□□ -1.09
VTI1A-202ENST00000432306 PDLIM7Q9NR12 457 aa8.23□□□□□ -1.09
VTI1A-202ENST00000432306 KCNH7Q9NS40 1196 aa8.23□□□□□ -1.09
VTI1A-202ENST00000432306 MTMR10Q9NXD2 777 aa8.23□□□□□ -1.09
VTI1A-202ENST00000432306 PRPF19Q9UMS4 504 aaKnown RBP8.23□□□□□ -1.09
VTI1A-202ENST00000432306 PCDHB11Q9Y5F2 797 aa8.23□□□□□ -1.09
VTI1A-202ENST00000432306 SQORQ9Y6N5 450 aa8.23□□□□□ -1.09
VTI1A-202ENST00000432306 A0A0C4DFX4 3053 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 TCRBV7S3A2A0A539 114 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 TMEM221A6NGB7 291 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 C2orf71A6NGG8 1288 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 FAM159BA6NKW6 160 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 TRIM49D1C9J1S8 452 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 E9PBE3 544 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 F8VP50 259 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 PI4K2BG5E9Z4 385 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 ZNF701M0R085 212 aaPredicted RBP8.22□□□□□ -1.09
VTI1A-202ENST00000432306 ZNF195O14628 629 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 SLC22A2O15244 555 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 KRT38O76015 456 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 VNN1O95497 513 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 IFNB1P01574 187 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 HLA-DRAP01903 254 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 C6orf222P0C671 652 aaPredicted RBP8.22□□□□□ -1.09
VTI1A-202ENST00000432306 PROZP22891 400 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 SFNP31947 248 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 IRS1P35568 1242 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 CRKP46108 304 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 GABRB2P47870 512 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 JAK3P52333 1124 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 OGDHQ02218 1023 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 TLR1Q15399 786 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 CHI3L2Q15782 390 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 ABCB5Q2M3G0 1257 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 SLC10A6Q3KNW5 377 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 BBS9Q3SYG4 887 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 NADK2Q4G0N4 442 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 INTS6LQ5JSJ4 861 aaKnown RBP8.22□□□□□ -1.09
VTI1A-202ENST00000432306 HP1BP3Q5SSJ5 553 aaPredicted RBP8.22□□□□□ -1.09
VTI1A-202ENST00000432306 FAXCQ5TGI0 409 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 KAZNQ674X7 775 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 C4orf22Q6V702 233 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 SLC30A10Q6XR72 485 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 FAM83AQ86UY5 434 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 ZNF410Q86VK4 478 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 NUDCD3Q8IVD9 361 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 IGDCC3Q8IVU1 814 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.22□□□□□ -1.09
VTI1A-202ENST00000432306 BBS5Q8N3I7 341 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 FBXW8Q8N3Y1 598 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 LILRB1Q8NHL6 650 aaPredicted RBP8.22□□□□□ -1.09
VTI1A-202ENST00000432306 ZFP28Q8NHY6 868 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 GSDMBQ8TAX9 411 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 FNDC8Q8TC99 324 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 ZNF606Q8WXB4 792 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 POMGNT1Q8WZA1 660 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 DLG3Q92796 817 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 KLF6Q99612 283 aaPredicted RBP8.22□□□□□ -1.09
VTI1A-202ENST00000432306 KATNAL1Q9BW62 490 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 ZNF341Q9BYN7 854 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 WDR12Q9GZL7 423 aaKnown RBP8.22□□□□□ -1.09
VTI1A-202ENST00000432306 PLAC1Q9HBJ0 212 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 APOBEC3GQ9HC16 384 aaKnown RBP8.22□□□□□ -1.09
VTI1A-202ENST00000432306 XAB2Q9HCS7 855 aaKnown RBP8.22□□□□□ -1.09
VTI1A-202ENST00000432306 FAIMQ9NVQ4 179 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 STK39Q9UEW8 545 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 ITGB1BP2Q9UKP3 347 aa8.22□□□□□ -1.09
VTI1A-202ENST00000432306 DDTLA6NHG4 134 aaPredicted RBP8.21□□□□□ -1.09
VTI1A-202ENST00000432306 HNRNPRO43390 633 aaKnown RBP8.21□□□□□ -1.09
VTI1A-202ENST00000432306 SIN3BO75182 1162 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 B3GALNT1O75752 331 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 OR6B1O95007 311 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 IL33O95760 270 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 CFBP00751 764 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 PCSK2P16519 638 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 RHCEP18577 417 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 CDH2P19022 906 aaPredicted RBP8.21□□□□□ -1.09
VTI1A-202ENST00000432306 KDELR1P24390 212 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 ADSLP30566 484 aaPredicted RBP8.21□□□□□ -1.09
VTI1A-202ENST00000432306 ALDH1A3P47895 512 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 ALDH3B2P48448 385 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 CD97P48960 835 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 AP3M2P53677 418 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 RHDQ02161 417 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 MRPL28Q13084 256 aaKnown RBP8.21□□□□□ -1.09
VTI1A-202ENST00000432306 EIF2B5Q13144 721 aaKnown RBP8.21□□□□□ -1.09
VTI1A-202ENST00000432306 STX3Q13277 289 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 NOMO1Q15155 1222 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 INSCQ1MX18 579 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 FAM26DQ5JW98 314 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 TMEM240Q5SV17 173 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 TEDDM1Q5T9Z0 273 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 FKBP1CQ5VVH2 108 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 IRAK1BP1Q5VVH5 260 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 TDRD10Q5VZ19 366 aaKnown RBP8.21□□□□□ -1.09
VTI1A-202ENST00000432306 LPCAT4Q643R3 524 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 MBLAC2Q68D91 279 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 TXNRD3NBQ6F5E7 133 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms