RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 M0QYT0 321 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 WNT9AO14904 365 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SLC7A4O43246 635 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TNFSF14O43557 240 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CLDN11O75508 207 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TFE3P19532 575 aaPredicted RBP9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 KRT9P35527 623 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 GABRB2P47870 512 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CXCR3P49682 368 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 NUMBP49757 651 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 C21orf59P57076 290 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 WDR4P57081 412 aaKnown RBP9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SNX16P57768 344 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PPP2CBP62714 309 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PPP2CAP67775 309 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 IL9RQ01113 521 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 NME3Q13232 169 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SHBQ15464 509 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 INAVAQ3KP66 663 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 DPCR1Q3MIW9 517 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 VWA3BQ502W6 1294 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ARTNQ5T4W7 220 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 OR6B2Q6IFH4 312 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TMPRSS7Q7RTY8 843 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 DSG4Q86SJ6 1040 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 C14orf80Q86SX3 495 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 FAM114A1Q8IWE2 563 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ZNF683Q8IZ20 524 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 OR14C36Q8NHC7 312 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 RNF34Q969K3 372 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PGAP3Q96FM1 320 aaPredicted RBP9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PPP1R9BQ96SB3 815 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ELF4Q99607 663 aaPredicted RBP9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 NDST4Q9H3R1 872 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CLSTN2Q9H4D0 955 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SYNCQ9H7C4 482 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PLCB1Q9NQ66 1216 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ANLNQ9NQW6 1124 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ARHGEF38Q9NXL2 777 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 RRN3Q9NYV6 651 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SARDHQ9UL12 918 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PPM1HQ9ULR3 514 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 HS3ST2Q9Y278 367 aa9.67□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 MCF2LO15068 1137 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ALOX15BO15296 676 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PLRG1O43660 514 aaKnown RBP9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ADCY5O95622 1261 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CYP11B1P15538 503 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TIMP2P16035 220 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ERCC5P28715 1186 aaPredicted RBP9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CD38P28907 300 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SCNN1AP37088 669 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CDH4P55283 916 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 NXPH1P58417 271 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 BPIFB4P59827 614 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ZNF177Q13360 481 aaPredicted RBP9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SMAD1Q15797 465 aaKnown RBP9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TMEM259Q4ZIN3 620 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 BRMS1LQ5PSV4 323 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 AGBL4Q5VU57 503 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 NAPEPLDQ6IQ20 393 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 Q6ZVU0 165 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 VASH1Q7L8A9 365 aaPredicted RBP9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SH2D3CQ8N5H7 860 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TMEM35BQ8NCS4 154 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SAP25Q8TEE9 199 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 OR8D1Q8WZ84 308 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SKA1Q96BD8 255 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SERAC1Q96JX3 654 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TUBGCP2Q9BSJ2 902 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 NAA15Q9BXJ9 866 aaKnown RBP9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 AASDHPPTQ9NRN7 309 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ARHGAP20Q9P2F6 1191 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 DKK4Q9UBT3 224 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SLC25A13Q9UJS0 675 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 VPS28Q9UK41 221 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 STAP1Q9ULZ2 295 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 FHOD1Q9Y613 1164 aa9.66□□□□□ -0.86
CDC42-IT1-201ENST00000431803 IGLV3-10A0A075B6K4 115 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TBC1D3DA0A087WVF3 549 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TBC1D3IA0A087WXS9 549 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TBC1D3EA0A087X179 549 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TBC1D3KA0A087X1G2 549 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TBC1D3FA6NER0 549 aaPredicted RBP9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 DRGXA6NNA5 263 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TBC1D3LB9A6J9 549 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TLR4O00206 839 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PLK4O00444 970 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 YKT6O15498 198 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 RTN2O75298 545 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CNTN5O94779 1100 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 LSM8O95777 96 aaKnown RBP9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TBC1D3HP0C7X1 549 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SNRPBP14678 240 aaKnown RBP9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 EPHA8P29322 1005 aaPredicted RBP9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 NUDT1P36639 197 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SULT1E1P49888 294 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 KCNMA1Q12791 1236 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CNTN1Q12860 1018 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms