RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 TUBB2BQ9BVA1 445 aa11.23□□□□□ -0.61
CHD4-202ENST00000430771 CINPQ9BW66 212 aaPredicted RBP11.23□□□□□ -0.61
CHD4-202ENST00000430771 OSBPL6Q9BZF3 934 aa11.23□□□□□ -0.61
CHD4-202ENST00000430771 PDFQ9HBH1 243 aa11.23□□□□□ -0.61
CHD4-202ENST00000430771 PLA2G4CQ9UP65 541 aa11.23□□□□□ -0.61
CHD4-202ENST00000430771 ERVW-1Q9UQF0 538 aa11.23□□□□□ -0.61
CHD4-202ENST00000430771 HS3ST2Q9Y278 367 aa11.23□□□□□ -0.61
CHD4-202ENST00000430771 SHISA7A6NL88 538 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 STK25O00506 426 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 ZNF185O15231 689 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 MAFKO60675 156 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 RNF40O75150 1001 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 ZMPSTE24O75844 475 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 URI1O94763 535 aaPredicted RBP11.22□□□□□ -0.61
CHD4-202ENST00000430771 STK10O94804 968 aaKnown RBP11.22□□□□□ -0.61
CHD4-202ENST00000430771 RBP3P10745 1247 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 F5P12259 2224 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 HNRNPLP14866 589 aaKnown RBP eCLIP11.22□□□□□ -0.61
CHD4-202ENST00000430771 GLDCP23378 1020 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 HSPA9P38646 679 aaKnown RBP11.22□□□□□ -0.61
CHD4-202ENST00000430771 NUMBP49757 651 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 SEC13P55735 322 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 MESP2Q0VG99 397 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 SLC10A2Q12908 348 aaPredicted RBP11.22□□□□□ -0.61
CHD4-202ENST00000430771 ZNF235Q14590 738 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 PRKD1Q15139 912 aaPredicted RBP11.22□□□□□ -0.61
CHD4-202ENST00000430771 INO80DQ53TQ3 878 aaPredicted RBP11.22□□□□□ -0.61
CHD4-202ENST00000430771 DNTTIP2Q5QJE6 756 aaKnown RBP11.22□□□□□ -0.61
CHD4-202ENST00000430771 EGFLAMQ63HQ2 1017 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 TMEM215Q68D42 235 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 SDE2Q6IQ49 451 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 C22orf39Q6P5X5 142 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 SERPINA13PQ6UXR4 307 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 ARHGAP36Q6ZRI8 547 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 TRIM67Q6ZTA4 783 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 ADAT2Q7Z6V5 191 aaKnown RBP11.22□□□□□ -0.61
CHD4-202ENST00000430771 TP53INP2Q8IXH6 220 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 CHPFQ8IZ52 775 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 SH2D3CQ8N5H7 860 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 CCDC33Q8N5R6 958 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 ATP11CQ8NB49 1132 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 NETO2Q8NC67 525 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 PJA1Q8NG27 643 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 CYB5D2Q8WUJ1 264 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 MS4A14Q96JA4 679 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 CCDC114Q96M63 670 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 TSGA13Q96PP4 275 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 FOXQ1Q9C009 403 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 CEP44Q9C0F1 390 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 FBRSL1Q9HCM7 1045 aaKnown RBP11.22□□□□□ -0.61
CHD4-202ENST00000430771 THAP10Q9P2Z0 257 aaPredicted RBP11.22□□□□□ -0.61
CHD4-202ENST00000430771 SAE1Q9UBE0 346 aaPredicted RBP11.22□□□□□ -0.61
CHD4-202ENST00000430771 SEPT3Q9UH03 358 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 VCANP13611 3396 aa11.22□□□□□ -0.61
CHD4-202ENST00000430771 CKAP5Q14008 2032 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 TCRBV7S2A1N4TA0A589 114 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 CCDC188H7C350 402 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 J3KR12 359 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 K7EQS6 105 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 KRIT1O00522 736 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 LIASO43766 372 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 PHF2O75151 1096 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 TMCC1O94876 653 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 IGSF6O95976 241 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 CHRNB1P11230 501 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 SRCP12931 536 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 CD72P21854 359 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 TIE1P35590 1138 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 CTSOP43234 321 aaPredicted RBP11.21□□□□□ -0.61
CHD4-202ENST00000430771 KIR2DL1P43626 348 aaPredicted RBP11.21□□□□□ -0.61
CHD4-202ENST00000430771 MMP13P45452 471 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 STK19P49842 368 aaPredicted RBP11.21□□□□□ -0.61
CHD4-202ENST00000430771 RENBPP51606 427 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 IFI35P80217 286 aaPredicted RBP11.21□□□□□ -0.61
CHD4-202ENST00000430771 BYSLQ13895 437 aaKnown RBP11.21□□□□□ -0.61
CHD4-202ENST00000430771 HNRNPDQ14103 355 aaKnown RBP11.21□□□□□ -0.61
CHD4-202ENST00000430771 ZNF234Q14588 700 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 LBRQ14739 615 aaKnown RBP11.21□□□□□ -0.61
CHD4-202ENST00000430771 STARD3Q14849 445 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 SIX1Q15475 284 aaPredicted RBP11.21□□□□□ -0.61
CHD4-202ENST00000430771 CCNG2Q16589 344 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 PTPRNQ16849 979 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 WHAMMP3Q1A5X7 153 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 EOGTQ5NDL2 527 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 DRICH1Q6PGQ1 229 aaPredicted RBP11.21□□□□□ -0.61
CHD4-202ENST00000430771 DARS2Q6PI48 645 aaKnown RBP11.21□□□□□ -0.61
CHD4-202ENST00000430771 LINGO4Q6UY18 593 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 CREG2Q8IUH2 290 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 CCDC105Q8IYK2 499 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 PCDH20Q8N6Y1 951 aaKnown RBP11.21□□□□□ -0.61
CHD4-202ENST00000430771 C12orf50Q8NA57 414 aaPredicted RBP11.21□□□□□ -0.61
CHD4-202ENST00000430771 FLCNQ8NFG4 579 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 RPLP0P6Q8NHW5 317 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 SLC35B2Q8TB61 432 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 USP33Q8TEY7 942 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 HTR3CQ8WXA8 447 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 SORCS1Q8WY21 1168 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 ATG4AQ8WYN0 398 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 MAML1Q92585 1016 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 EZH1Q92800 747 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms