RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 VPS50Q96JG6 964 aa13.97□□□□□ -0.17
SGMS1-203ENST00000429490 ZFRQ96KR1 1074 aaKnown RBP13.97□□□□□ -0.17
SGMS1-203ENST00000429490 PKP2Q99959 881 aa13.97□□□□□ -0.17
SGMS1-203ENST00000429490 CNTN3Q9P232 1028 aa13.97□□□□□ -0.17
SGMS1-203ENST00000429490 STK39Q9UEW8 545 aa13.97□□□□□ -0.17
SGMS1-203ENST00000429490 DOLKQ9UPQ8 538 aa13.97□□□□□ -0.17
SGMS1-203ENST00000429490 RAP2CQ9Y3L5 183 aa13.97□□□□□ -0.17
SGMS1-203ENST00000429490 PCDHB12Q9Y5F1 795 aa13.97□□□□□ -0.17
SGMS1-203ENST00000429490 NCF1BA6NI72 391 aaPredicted RBP13.97□□□□□ -0.17
SGMS1-203ENST00000429490 NCF1CA8MVU1 366 aaPredicted RBP13.97□□□□□ -0.17
SGMS1-203ENST00000429490 TSPAN3O60637 253 aa13.97□□□□□ -0.17
SGMS1-203ENST00000429490 USP17L7P0C7H9 530 aa13.97□□□□□ -0.17
SGMS1-203ENST00000429490 NCF1P14598 390 aaPredicted RBP13.97□□□□□ -0.17
SGMS1-203ENST00000429490 YBX3P16989 372 aaKnown RBP eCLIP13.97□□□□□ -0.177e-7■□□□□ 8.7
SGMS1-203ENST00000429490 CCDC142Q17RM4 750 aa13.97□□□□□ -0.17
SGMS1-203ENST00000429490 ACBD5Q5T8D3 534 aaPredicted RBP13.97□□□□□ -0.17
SGMS1-203ENST00000429490 TRNP1Q6NT89 227 aa13.97□□□□□ -0.17
SGMS1-203ENST00000429490 ZFP1Q6P2D0 407 aa13.97□□□□□ -0.17
SGMS1-203ENST00000429490 KLHDC10Q6PID8 442 aa13.97□□□□□ -0.17
SGMS1-203ENST00000429490 OTOP3Q7RTS5 596 aa13.97□□□□□ -0.17
SGMS1-203ENST00000429490 DENND6AQ8IWF6 608 aa13.97□□□□□ -0.17
SGMS1-203ENST00000429490 SPATA22Q8NHS9 363 aa13.97□□□□□ -0.17
SGMS1-203ENST00000429490 NXNL1Q96CM4 212 aa13.97□□□□□ -0.17
SGMS1-203ENST00000429490 ULBP1Q9BZM6 244 aa13.97□□□□□ -0.17
SGMS1-203ENST00000429490 DRC3Q9H069 523 aa13.97□□□□□ -0.17
SGMS1-203ENST00000429490 TMEM165Q9HC07 324 aa13.97□□□□□ -0.17
SGMS1-203ENST00000429490 MYRFQ9Y2G1 1151 aa13.97□□□□□ -0.17
SGMS1-203ENST00000429490 TRPC5OSA6NMA1 111 aa13.96□□□□□ -0.17
SGMS1-203ENST00000429490 H3BRB1 525 aa13.96□□□□□ -0.17
SGMS1-203ENST00000429490 INPP4BO15327 924 aa13.96□□□□□ -0.17
SGMS1-203ENST00000429490 DYNC1LI2O43237 492 aaPredicted RBP13.96□□□□□ -0.17
SGMS1-203ENST00000429490 RECQL4O94761 1208 aa13.96□□□□□ -0.17
SGMS1-203ENST00000429490 MPOP05164 745 aa13.96□□□□□ -0.17
SGMS1-203ENST00000429490 MPP1Q00013 466 aa13.96□□□□□ -0.17
SGMS1-203ENST00000429490 ILDR2Q71H61 639 aa13.96□□□□□ -0.17
SGMS1-203ENST00000429490 ZNF276Q8N554 614 aa13.96□□□□□ -0.17
SGMS1-203ENST00000429490 ZNF560Q96MR9 790 aa13.96□□□□□ -0.17
SGMS1-203ENST00000429490 GPR20Q99678 358 aa13.96□□□□□ -0.17
SGMS1-203ENST00000429490 TUT1Q9H6E5 874 aaKnown RBP13.96□□□□□ -0.17
SGMS1-203ENST00000429490 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.96□□□□□ -0.17
SGMS1-203ENST00000429490 FAM95CA0A1B0GW59 222 aa13.96□□□□□ -0.17
SGMS1-203ENST00000429490 KLHL33A6NCF5 533 aa13.96□□□□□ -0.17
SGMS1-203ENST00000429490 PSMD12O00232 456 aaPredicted RBP13.96□□□□□ -0.17
SGMS1-203ENST00000429490 CYP2C8P10632 490 aa13.96□□□□□ -0.17
SGMS1-203ENST00000429490 OAZ1P54368 228 aa13.96□□□□□ -0.17
SGMS1-203ENST00000429490 SLC44A4Q53GD3 710 aa13.96□□□□□ -0.17
SGMS1-203ENST00000429490 TEX44Q53QW1 395 aa13.96□□□□□ -0.17
SGMS1-203ENST00000429490 PNPLA1Q8N8W4 532 aa13.96□□□□□ -0.17
SGMS1-203ENST00000429490 RP9Q8TA86 221 aaKnown RBP13.96□□□□□ -0.17
SGMS1-203ENST00000429490 SDCCAG3Q96C92 435 aa13.96□□□□□ -0.17
SGMS1-203ENST00000429490 QKIQ96PU8 341 aaKnown RBP eCLIP13.96□□□□□ -0.174e-10■■■■□ 20.5
SGMS1-203ENST00000429490 GBA2Q9HCG7 927 aaPredicted RBP13.96□□□□□ -0.17
SGMS1-203ENST00000429490 DNAJC28Q9NX36 388 aa13.96□□□□□ -0.17
SGMS1-203ENST00000429490 RRN3Q9NYV6 651 aa13.96□□□□□ -0.17
SGMS1-203ENST00000429490 CACNG4Q9UBN1 327 aa13.96□□□□□ -0.17
SGMS1-203ENST00000429490 SOWAHBA6NEL2 793 aa13.96□□□□□ -0.18
SGMS1-203ENST00000429490 CCL22O00626 93 aa13.96□□□□□ -0.18
SGMS1-203ENST00000429490 TRMUO75648 421 aaKnown RBP13.96□□□□□ -0.18
SGMS1-203ENST00000429490 BAIAP3O94812 1187 aa13.96□□□□□ -0.18
SGMS1-203ENST00000429490 ATP5BP06576 529 aaKnown RBP13.96□□□□□ -0.18
SGMS1-203ENST00000429490 ZNF23P17027 643 aa13.96□□□□□ -0.18
SGMS1-203ENST00000429490 NMBRP28336 390 aa13.96□□□□□ -0.18
SGMS1-203ENST00000429490 LRPAP1P30533 357 aa13.96□□□□□ -0.18
SGMS1-203ENST00000429490 CDH5P33151 784 aaPredicted RBP13.96□□□□□ -0.18
SGMS1-203ENST00000429490 TAF6P49848 677 aa13.96□□□□□ -0.18
SGMS1-203ENST00000429490 SLC7A2P52569 658 aa13.96□□□□□ -0.18
SGMS1-203ENST00000429490 NR1H2P55055 460 aa13.96□□□□□ -0.18
SGMS1-203ENST00000429490 CELF3Q5SZQ8 465 aaKnown RBP13.96□□□□□ -0.18
SGMS1-203ENST00000429490 IL23RQ5VWK5 629 aa13.96□□□□□ -0.18
SGMS1-203ENST00000429490 LIPMQ5VYY2 423 aa13.96□□□□□ -0.18
SGMS1-203ENST00000429490 HASPINQ8TF76 798 aa13.96□□□□□ -0.18
SGMS1-203ENST00000429490 EMID1Q96A84 441 aaPredicted RBP13.96□□□□□ -0.18
SGMS1-203ENST00000429490 TSPYL2Q9H2G4 693 aaPredicted RBP13.96□□□□□ -0.18
SGMS1-203ENST00000429490 COQ10BQ9H8M1 238 aa13.96□□□□□ -0.18
SGMS1-203ENST00000429490 CRYL1Q9Y2S2 319 aa13.96□□□□□ -0.18
SGMS1-203ENST00000429490 ARFGEF1Q9Y6D6 1849 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 FOXD2O60548 495 aaPredicted RBP13.95□□□□□ -0.18
SGMS1-203ENST00000429490 MT-CYBP00156 380 aaPredicted RBP13.95□□□□□ -0.18
SGMS1-203ENST00000429490 APOA4P06727 396 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 HSPA13P48723 471 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 DHFR2Q86XF0 187 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 PCYOX1LQ8NBM8 494 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 LPGAT1Q92604 370 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 RBBP8Q99708 897 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 OCEL1Q9H607 264 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 STN1Q9H668 368 aaKnown RBP13.95□□□□□ -0.18
SGMS1-203ENST00000429490 MRPL40Q9NQ50 206 aaKnown RBP13.95□□□□□ -0.18
SGMS1-203ENST00000429490 SUN2Q9UH99 717 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 CROTQ9UKG9 612 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 ARPP19P56211 112 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 MBTD1Q05BQ5 628 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 CDH17Q12864 832 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 SEMA5AQ13591 1074 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 NCBP2-AS2Q69YL0 99 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 OLFML1Q6UWY5 402 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 LDB1Q86U70 411 aaPredicted RBP13.95□□□□□ -0.18
SGMS1-203ENST00000429490 APOBEC3FQ8IUX4 373 aaKnown RBP13.95□□□□□ -0.18
SGMS1-203ENST00000429490 CLEC4FQ8N1N0 589 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 FSTL5Q8N475 847 aaPredicted RBP13.95□□□□□ -0.18
SGMS1-203ENST00000429490 C1orf21Q9H246 121 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms