RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 USP33Q8TEY7 942 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 CASP10Q92851 521 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 VPS39Q96JC1 886 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 AGAP2Q99490 1192 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 ZCWPW1Q9H0M4 648 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 FBXO44Q9H4M3 255 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 ZNF395Q9H8N7 513 aaPredicted RBP13.93□□□□□ -0.18
THBS3-202ENST00000428962 CHRAC1Q9NRG0 131 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 IARS2Q9NSE4 1012 aaKnown RBP13.93□□□□□ -0.18
THBS3-202ENST00000428962 TRMT13Q9NUP7 481 aaKnown RBP13.93□□□□□ -0.18
THBS3-202ENST00000428962 DNAJC28Q9NX36 388 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 DONSONQ9NYP3 566 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 UBP1Q9NZI7 540 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 ARMCX1Q9P291 453 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 MYO16Q9Y6X6 1858 aa13.93□□□□□ -0.18
THBS3-202ENST00000428962 WASH4PA8MWX3 477 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 TMEM114B3SHH9 223 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 MAFKO60675 156 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 PRKCGP05129 697 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 PAMP19021 973 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 DNAJB1P25685 340 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 HARS2P49590 506 aaKnown RBP13.92□□□□□ -0.18
THBS3-202ENST00000428962 HSF5Q4G112 596 aaPredicted RBP13.92□□□□□ -0.18
THBS3-202ENST00000428962 MSANTD2Q6P1R3 559 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 PKN3Q6P5Z2 889 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 POTEHQ6S545 545 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 SCD5Q86SK9 330 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 CLEC14AQ86T13 490 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 TMPRSS6Q8IU80 811 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 RDH11Q8TC12 318 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 ATXN7L3BQ96GX2 97 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 GPR22Q99680 433 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 RHOJQ9H4E5 214 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 DENND2DQ9H6A0 471 aaPredicted RBP13.92□□□□□ -0.18
THBS3-202ENST00000428962 DCLRE1BQ9H816 532 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 MRM3Q9HC36 420 aaKnown RBP13.92□□□□□ -0.18
THBS3-202ENST00000428962 ENTPD7Q9NQZ7 604 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 ABI2Q9NYB9 513 aaPredicted RBP13.92□□□□□ -0.18
THBS3-202ENST00000428962 TAS2R1Q9NYW7 299 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 SFMBT1Q9UHJ3 866 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 SCML2Q9UQR0 700 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 APOBEC2Q9Y235 224 aaKnown RBP13.92□□□□□ -0.18
THBS3-202ENST00000428962 CDY1Q9Y6F8 540 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 FRMPD3Q5JV73 1810 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 A0A1W2PQH9 124 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 KCNU1A8MYU2 1149 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 E9PAM4 449 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 MSI1O43347 362 aaKnown RBP13.92□□□□□ -0.18
THBS3-202ENST00000428962 ITM2AO43736 263 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 LYPLA1O75608 230 aaPredicted RBP13.92□□□□□ -0.18
THBS3-202ENST00000428962 OAZ2O95190 189 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 KLHL2O95198 593 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 ENO1P06733 434 aaKnown RBP13.92□□□□□ -0.18
THBS3-202ENST00000428962 ALOX15P16050 662 aaPredicted RBP13.92□□□□□ -0.18
THBS3-202ENST00000428962 TPH1P17752 444 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 NMBRP28336 390 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 POLD2P49005 469 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 TUBP50607 506 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 PRKAA2P54646 552 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 ALDH18A1P54886 795 aaKnown RBP13.92□□□□□ -0.18
THBS3-202ENST00000428962 DSC1Q08554 894 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 NOMO2Q5JPE7 1267 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 AFMIDQ63HM1 303 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 SLC24A5Q71RS6 500 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 OTOP3Q7RTS5 596 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 MON1AQ86VX9 555 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 ZNF296Q8WUU4 475 aaPredicted RBP13.92□□□□□ -0.18
THBS3-202ENST00000428962 NSMCE1Q8WV22 266 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 C8orf48Q96LL4 319 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 C1orf74Q96LT6 269 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 MCMBPQ9BTE3 642 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 CCDC106Q9BWC9 280 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 FSD1LQ9BXM9 530 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 SLC39A8Q9C0K1 460 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 MCOLN1Q9GZU1 580 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 TBC1D13Q9NVG8 400 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 GEMIN8Q9NWZ8 242 aaKnown RBP13.92□□□□□ -0.18
THBS3-202ENST00000428962 TLK1Q9UKI8 766 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 TLR6Q9Y2C9 796 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 PCDHB12Q9Y5F1 795 aa13.92□□□□□ -0.18
THBS3-202ENST00000428962 MAGEC1O60732 1142 aa13.91□□□□□ -0.18
THBS3-202ENST00000428962 DIAPH2O60879 1101 aa13.91□□□□□ -0.18
THBS3-202ENST00000428962 AOC1P19801 751 aa13.91□□□□□ -0.18
THBS3-202ENST00000428962 RCN2Q14257 317 aa13.91□□□□□ -0.18
THBS3-202ENST00000428962 ACCSLQ4AC99 568 aa13.91□□□□□ -0.18
THBS3-202ENST00000428962 ARHGAP36Q6ZRI8 547 aa13.91□□□□□ -0.18
THBS3-202ENST00000428962 CNTN4Q8IWV2 1026 aa13.91□□□□□ -0.18
THBS3-202ENST00000428962 NUP93Q8N1F7 819 aa13.91□□□□□ -0.18
THBS3-202ENST00000428962 PLCD3Q8N3E9 789 aa13.91□□□□□ -0.18
THBS3-202ENST00000428962 IPMKQ8NFU5 416 aa13.91□□□□□ -0.18
THBS3-202ENST00000428962 GABPB2Q8TAK5 448 aaPredicted RBP13.91□□□□□ -0.18
THBS3-202ENST00000428962 ABHD8Q96I13 439 aa13.91□□□□□ -0.18
THBS3-202ENST00000428962 PGLYRP2Q96PD5 576 aa13.91□□□□□ -0.18
THBS3-202ENST00000428962 FAM193BQ96PV7 902 aaPredicted RBP13.91□□□□□ -0.18
THBS3-202ENST00000428962 SORT1Q99523 831 aa13.91□□□□□ -0.18
THBS3-202ENST00000428962 FICDQ9BVA6 458 aa13.91□□□□□ -0.18
THBS3-202ENST00000428962 NMRAL1Q9HBL8 299 aa13.91□□□□□ -0.18
THBS3-202ENST00000428962 MAGED2Q9UNF1 606 aaPredicted RBP13.91□□□□□ -0.18
THBS3-202ENST00000428962 PLXNA3P51805 1871 aa13.91□□□□□ -0.18
THBS3-202ENST00000428962 FNDC1Q4ZHG4 1894 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms