RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 HP1BP3Q5SSJ5 553 aaPredicted RBP9.06□□□□□ -0.96
SMC6-204ENST00000428868 ACBD5Q5T8D3 534 aaPredicted RBP9.06□□□□□ -0.96
SMC6-204ENST00000428868 TANGO2Q6ICL3 276 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 EMBQ6PCB8 327 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 VITQ6UXI7 678 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 LINGO4Q6UY18 593 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 PID1Q7Z2X4 250 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 C12orf40Q86WS4 652 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 PPIL6Q8IXY8 311 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 SPATA22Q8NHS9 363 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 MYLIPQ8WY64 445 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 PABPC5Q96DU9 382 aaKnown RBP9.06□□□□□ -0.96
SMC6-204ENST00000428868 OXNAD1Q96HP4 312 aaPredicted RBP9.06□□□□□ -0.96
SMC6-204ENST00000428868 TEKT5Q96M29 485 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 NSMCE3Q96MG7 304 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 GUCD1Q96NT3 240 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 DDX50Q9BQ39 737 aaKnown RBP9.06□□□□□ -0.96
SMC6-204ENST00000428868 SPON2Q9BUD6 331 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 FUT8Q9BYC5 575 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 ACE2Q9BYF1 805 aaPredicted RBP9.06□□□□□ -0.96
SMC6-204ENST00000428868 BRD8Q9H0E9 1235 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 GBA3Q9H227 469 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 SP110Q9HB58 689 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 ARFGAP3Q9NP61 516 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 NT5MQ9NPB1 228 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 PIH1D1Q9NWS0 290 aaKnown RBP9.06□□□□□ -0.96
SMC6-204ENST00000428868 UBP1Q9NZI7 540 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 LMCD1Q9NZU5 365 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 IGSF9Q9P2J2 1179 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 INTS6Q9UL03 887 aaKnown RBP9.06□□□□□ -0.96
SMC6-204ENST00000428868 ZNF510Q9Y2H8 683 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 ATP8A1Q9Y2Q0 1164 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 OR51B4Q9Y5P0 310 aa9.06□□□□□ -0.96
SMC6-204ENST00000428868 DOCK9Q9BZ29 2069 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 TMEM265A0A087WTH1 108 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 ILVBLA1L0T0 632 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 OTOL1A6NHN0 477 aaPredicted RBP9.05□□□□□ -0.96
SMC6-204ENST00000428868 HEPACAM2A8MVW5 462 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 NEDD8-MDP1E9PL57 170 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 H3BQ06 376 aaPredicted RBP9.05□□□□□ -0.96
SMC6-204ENST00000428868 CHADO15335 359 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 OPHN1O60890 802 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 USP12O75317 370 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 PPFIA2O75334 1257 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 AVILO75366 819 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 ZMPSTE24O75844 475 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 MT-CYBP00156 380 aaPredicted RBP9.05□□□□□ -0.96
SMC6-204ENST00000428868 PENKP01210 267 aaPredicted RBP9.05□□□□□ -0.96
SMC6-204ENST00000428868 TUBBP07437 444 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 APRTP07741 180 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 BMP1P13497 986 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 POU3F3P20264 500 aaPredicted RBP9.05□□□□□ -0.96
SMC6-204ENST00000428868 WEE1P30291 646 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 HSPA9P38646 679 aaKnown RBP9.05□□□□□ -0.96
SMC6-204ENST00000428868 CTSOP43234 321 aaPredicted RBP9.05□□□□□ -0.96
SMC6-204ENST00000428868 MAGEA6P43360 314 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 RGRP47804 291 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 YBEYP58557 167 aaPredicted RBP9.05□□□□□ -0.96
SMC6-204ENST00000428868 DSC2Q02487 901 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 DHX9Q08211 1270 aaKnown RBP9.05□□□□□ -0.96
SMC6-204ENST00000428868 IL10RBQ08334 325 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 NIPAL4Q0D2K0 466 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 MESP2Q0VG99 397 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 CASP8Q14790 479 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 MORF4L2Q15014 288 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 GAB4Q2WGN9 574 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 EML3Q32P44 896 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 MAP9Q49MG5 647 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 MPPE1Q53F39 396 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 C6orf118Q5T5N4 469 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 TTC39BQ5VTQ0 682 aaPredicted RBP9.05□□□□□ -0.96
SMC6-204ENST00000428868 NAIF1Q69YI7 327 aaPredicted RBP9.05□□□□□ -0.96
SMC6-204ENST00000428868 IL31Q6EBC2 164 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 SETD3Q86TU7 594 aaPredicted RBP9.05□□□□□ -0.96
SMC6-204ENST00000428868 CAND1Q86VP6 1230 aaKnown RBP9.05□□□□□ -0.96
SMC6-204ENST00000428868 IGDCC3Q8IVU1 814 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 MFN1Q8IWA4 741 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 MPP5Q8N3R9 675 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 ZCCHC9Q8N567 271 aaKnown RBP9.05□□□□□ -0.96
SMC6-204ENST00000428868 CELF5Q8N6W0 485 aaKnown RBP9.05□□□□□ -0.96
SMC6-204ENST00000428868 PDCD7Q8N8D1 485 aaKnown RBP9.05□□□□□ -0.96
SMC6-204ENST00000428868 NAT16Q8N8M0 369 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 EIF1ADQ8N9N8 165 aaKnown RBP9.05□□□□□ -0.96
SMC6-204ENST00000428868 UHMK1Q8TAS1 419 aaKnown RBP9.05□□□□□ -0.96
SMC6-204ENST00000428868 CCHCR1Q8TD31 782 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 SMARCD2Q92925 531 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 IRF7Q92985 503 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 KXD1Q9BQD3 176 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 TRIM56Q9BRZ2 755 aaKnown RBP9.05□□□□□ -0.96
SMC6-204ENST00000428868 RPP25Q9BUL9 199 aaKnown RBP9.05□□□□□ -0.96
SMC6-204ENST00000428868 MUC3BQ9H195 1237 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 MAGEH1Q9H213 219 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 CDC42EP4Q9H3Q1 356 aaKnown RBP9.05□□□□□ -0.96
SMC6-204ENST00000428868 SEMA4AQ9H3S1 761 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 KIF9Q9HAQ2 790 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 GLOD4Q9HC38 313 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 ATP13A1Q9HD20 1204 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 HPS4Q9NQG7 708 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 SPHK2Q9NRA0 654 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 RBM22Q9NW64 420 aaKnown RBP eCLIP9.05□□□□□ -0.969e-20■■■■■ 33.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms