RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 EPHA3P29320 983 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 DSC2Q02487 901 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 STX3Q13277 289 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 GRM3Q14832 879 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 MUM1Q2TAK8 710 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 TCHHL1Q5QJ38 904 aaPredicted RBP8.53□□□□□ -1.04
CD44-208ENST00000428726 C10orf120Q5SQS8 335 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 LINGO4Q6UY18 593 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 RAET1EQ8TD07 263 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 PPP4R1Q8TF05 950 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 CFAP54Q96N23 3096 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 SENP6Q9GZR1 1112 aaPredicted RBP8.53□□□□□ -1.04
CD44-208ENST00000428726 TASP1Q9H6P5 420 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 ARHGEF3Q9NR81 526 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 GDAP2Q9NXN4 497 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 GIMAP2Q9UG22 337 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 WASF2Q9Y6W5 498 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 SCN4AP35499 1836 aa8.52□□□□□ -1.04
CD44-208ENST00000428726 DPPA5A6NC42 116 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 CAPN15O75808 1086 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 KRT38O76015 456 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 ACVRL1P37023 503 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 PNPLA4P41247 253 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 ETV4P43268 484 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 ACADSBP45954 432 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 PSEN1P49768 467 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 SLC10A7Q0GE19 358 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 GALNT3Q14435 633 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 USP10Q14694 798 aaKnown RBP8.52□□□□□ -1.05
CD44-208ENST00000428726 CLLU1OSQ5K130 101 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 SPOUT1Q5T280 376 aaKnown RBP8.52□□□□□ -1.05
CD44-208ENST00000428726 RNF220Q5VTB9 566 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 LAYNQ6UX15 382 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 ABI1Q8IZP0 508 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 FAM156AQ8NDB6 213 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 RSPH1Q8WYR4 309 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 PSMG2Q969U7 264 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 NAF1Q96HR8 494 aaKnown RBP8.52□□□□□ -1.05
CD44-208ENST00000428726 HSFY1Q96LI6 401 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 FSD1LQ9BXM9 530 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 TRIM8Q9BZR9 551 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 EBF2Q9HAK2 575 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 SNX15Q9NRS6 342 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 FBXW11Q9UKB1 542 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 EMCNQ9ULC0 261 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 PCDHA11Q9Y5I1 949 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 A0A096LPK6 155 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 NCF1BA6NI72 391 aaPredicted RBP8.52□□□□□ -1.05
CD44-208ENST00000428726 NCF1CA8MVU1 366 aaPredicted RBP8.52□□□□□ -1.05
CD44-208ENST00000428726 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.52□□□□□ -1.05
CD44-208ENST00000428726 DCXO43602 365 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 STK10O94804 968 aaKnown RBP8.52□□□□□ -1.05
CD44-208ENST00000428726 UBTFL6P0CB48 400 aaPredicted RBP8.52□□□□□ -1.05
CD44-208ENST00000428726 NCF1P14598 390 aaPredicted RBP8.52□□□□□ -1.05
CD44-208ENST00000428726 CCNB1P14635 433 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 GJA1P17302 382 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 MAGEA6P43360 314 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 PTDSS1P48651 473 aaKnown RBP8.52□□□□□ -1.05
CD44-208ENST00000428726 NAGLUP54802 743 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 IRF5Q13568 498 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 THOC5Q13769 683 aaKnown RBP8.52□□□□□ -1.05
CD44-208ENST00000428726 PDK1Q15118 436 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 RCN1Q15293 331 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 PPM1LQ5SGD2 360 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 SCD5Q86SK9 330 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 METTL23Q86XA0 190 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 PHTF2Q8N3S3 785 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 ZNF781Q8N8C0 355 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 SPDYE1Q8NFV5 336 aaPredicted RBP8.52□□□□□ -1.05
CD44-208ENST00000428726 BLOC1S5Q8TDH9 187 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 CENPIQ92674 756 aaPredicted RBP8.52□□□□□ -1.05
CD44-208ENST00000428726 CERS2Q96G23 380 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 SMARCD1Q96GM5 515 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 C11orf84Q9BUA3 381 aaPredicted RBP8.52□□□□□ -1.05
CD44-208ENST00000428726 CADM1Q9BY67 442 aaKnown RBP8.52□□□□□ -1.05
CD44-208ENST00000428726 NUF2Q9BZD4 464 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 FAM96AQ9H5X1 160 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 BPIFA1Q9NP55 256 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 PNPLA8Q9NP80 782 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 DLGAP2Q9P1A6 1054 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 FAM8A1Q9UBU6 413 aa8.52□□□□□ -1.05
CD44-208ENST00000428726 A0A0D9SEW6 157 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 SLC12A8A0AV02 714 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 HHLA1C9JL84 531 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 GABRDO14764 452 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 DCLK1O15075 740 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 DLDP09622 509 aaKnown RBP8.51□□□□□ -1.05
CD44-208ENST00000428726 CYBAP13498 195 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 MPSTP25325 297 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 CD86P42081 329 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 SKIV2L2P42285 1042 aaKnown RBP8.51□□□□□ -1.05
CD44-208ENST00000428726 NR2C2P49116 596 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 RPL34P49207 117 aaKnown RBP8.51□□□□□ -1.05
CD44-208ENST00000428726 PAPOLAP51003 745 aaKnown RBP8.51□□□□□ -1.05
CD44-208ENST00000428726 CSE1LP55060 971 aaKnown RBP8.51□□□□□ -1.05
CD44-208ENST00000428726 FKBP1BP68106 108 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 TAF10Q12962 218 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 IHHQ14623 411 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 TCTN1Q2MV58 587 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 CTXN3Q4LDR2 81 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms