RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 HIC2Q96JB3 615 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 CCDC114Q96M63 670 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 INTS2Q9H0H0 1204 aaKnown RBP18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 ABCG4Q9H172 646 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 MUC3BQ9H195 1237 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 OSBPL2Q9H1P3 480 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 DYRK4Q9NR20 520 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 CNTN6Q9UQ52 1028 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 OR51B4Q9Y5P0 310 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 HECTD1Q9ULT8 2610 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 SPTA1P02549 2419 aa18.78■□□□□ 0.6
UPK3BP1-201ENST00000428678 J3QKU1 62 aa18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 PCDH8O95206 1070 aa18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 CTSLP07711 333 aa18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 SRCP12931 536 aa18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 HNRNPA2B1P22626 353 aaKnown RBP18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 GNA15P30679 374 aa18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 CHRNA3P32297 505 aa18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 CLDN2P57739 230 aa18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 RHDQ02161 417 aa18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 CCDC15Q0P6D6 951 aa18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 NME3Q13232 169 aa18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 KLHL10Q6JEL2 608 aa18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 NEK5Q6P3R8 708 aa18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 ATP11CQ8NB49 1132 aa18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 SPATA20Q8TB22 786 aa18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 KCNE4Q8WWG9 221 aa18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 ZNF606Q8WXB4 792 aa18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 ARRDC3Q96B67 414 aa18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 APOLD1Q96LR9 279 aa18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 NOX5Q96PH1 765 aa18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 SLC2A13Q96QE2 648 aa18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 POLR1BQ9H9Y6 1135 aa18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 UBE2TQ9NPD8 197 aaPredicted RBP18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 ACP6Q9NPH0 428 aa18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 NLGN3Q9NZ94 848 aa18.77■□□□□ 0.6
UPK3BP1-201ENST00000428678 CLDN11O75508 207 aa18.76■□□□□ 0.59
UPK3BP1-201ENST00000428678 GRAP2O75791 330 aa18.76■□□□□ 0.59
UPK3BP1-201ENST00000428678 MT-CO1P00395 513 aa18.76■□□□□ 0.59
UPK3BP1-201ENST00000428678 GIMD1P0DJR0 217 aa18.76■□□□□ 0.59
UPK3BP1-201ENST00000428678 LSSP48449 732 aa18.76■□□□□ 0.59
UPK3BP1-201ENST00000428678 KRT83P78385 493 aa18.76■□□□□ 0.59
UPK3BP1-201ENST00000428678 ZNF542PQ5EBM4 170 aa18.76■□□□□ 0.59
UPK3BP1-201ENST00000428678 GCNT7Q6ZNI0 430 aa18.76■□□□□ 0.59
UPK3BP1-201ENST00000428678 PTAR1Q7Z6K3 402 aaPredicted RBP18.76■□□□□ 0.59
UPK3BP1-201ENST00000428678 EVA1BQ9NVM1 165 aa18.76■□□□□ 0.59
UPK3BP1-201ENST00000428678 DNAJC28Q9NX36 388 aa18.76■□□□□ 0.59
UPK3BP1-201ENST00000428678 HS3ST2Q9Y278 367 aa18.76■□□□□ 0.59
UPK3BP1-201ENST00000428678 HS3ST4Q9Y661 456 aa18.76■□□□□ 0.59
UPK3BP1-201ENST00000428678 GOLGA6L4A6NEF3 574 aa18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 NEMP2A6NFY4 417 aa18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 K7ERQ8 282 aa18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 KLK10O43240 276 aa18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 SNAP91O60641 907 aa18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 HSF2BPO75031 334 aa18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 DXOO77932 396 aaKnown RBP18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 GP1BAP07359 652 aa18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 GLI1P08151 1106 aa18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 CD44P16070 742 aaKnown RBP18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 RRM1P23921 792 aa18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 DUSP3P51452 185 aaPredicted RBP18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 ERVPABLB-1P60509 514 aa18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 SEL1L3Q68CR1 1132 aa18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 OR6B2Q6IFH4 312 aa18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 TTI2Q6NXR4 508 aa18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 C14orf80Q86SX3 495 aa18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 SLC22A18ASQ8N1D0 253 aa18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 OR2A12Q8NGT7 310 aa18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 GRIN3AQ8TCU5 1115 aa18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 MAPK15Q8TD08 544 aa18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 C2orf49Q9BVC5 232 aaPredicted RBP18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 SIK2Q9H0K1 926 aa18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 THSD1Q9NS62 852 aa18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 HOOK1Q9UJC3 728 aaKnown RBP18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 ZFR2Q9UPR6 939 aaKnown RBP18.75■□□□□ 0.59
UPK3BP1-201ENST00000428678 LY6G6EA0A0G2JKS1 128 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 A6NNZ2 444 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 K7ESM1 405 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 SCAMP1O15126 338 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 PAGE1O75459 146 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 NEBLO76041 1014 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 AFPP02771 609 aaKnown RBP18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 PRNPP04156 253 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 RHOCP08134 193 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 CDH4P55283 916 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 HNRNPKP61978 463 aaKnown RBP eCLIP18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 MTA1Q13330 715 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 EFHC1Q5JVL4 640 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 Q6ZSR6 202 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 ERN2Q76MJ5 926 aaKnown RBP18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 ABI3BPQ7Z7G0 1075 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 TRIM59Q8IWR1 403 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 CHST14Q8NCH0 376 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 TMIEQ8NEW7 156 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 IFI44Q8TCB0 444 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 NELFBQ8WX92 580 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 IFT43Q96FT9 208 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 WBP1Q96G27 269 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 VCPIP1Q96JH7 1222 aa18.74■□□□□ 0.59
UPK3BP1-201ENST00000428678 CPXM1Q96SM3 734 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms