RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 H7C0C1 242 aa15.72■□□□□ 0.11
COL11A1-204ENST00000427239 LIASO43766 372 aa15.72■□□□□ 0.11
COL11A1-204ENST00000427239 SNAP91O60641 907 aa15.72■□□□□ 0.11
COL11A1-204ENST00000427239 HNRNPLP14866 589 aaKnown RBP eCLIP15.72■□□□□ 0.11
COL11A1-204ENST00000427239 GLDCP23378 1020 aa15.72■□□□□ 0.11
COL11A1-204ENST00000427239 STIP1P31948 543 aaKnown RBP15.72■□□□□ 0.11
COL11A1-204ENST00000427239 ATP5OP48047 213 aa15.72■□□□□ 0.11
COL11A1-204ENST00000427239 RENBPP51606 427 aa15.72■□□□□ 0.11
COL11A1-204ENST00000427239 ST8SIA6P61647 398 aa15.72■□□□□ 0.11
COL11A1-204ENST00000427239 ARF5P84085 180 aa15.72■□□□□ 0.11
COL11A1-204ENST00000427239 SIGLEC14Q08ET2 396 aa15.72■□□□□ 0.11
COL11A1-204ENST00000427239 AP1B1Q10567 949 aa15.72■□□□□ 0.11
COL11A1-204ENST00000427239 CCINQ13939 588 aa15.72■□□□□ 0.11
COL11A1-204ENST00000427239 WHAMMP3Q1A5X7 153 aa15.72■□□□□ 0.11
COL11A1-204ENST00000427239 SLC45A4Q5BKX6 768 aa15.72■□□□□ 0.11
COL11A1-204ENST00000427239 DGKKQ5KSL6 1271 aa15.72■□□□□ 0.11
COL11A1-204ENST00000427239 ARHGAP36Q6ZRI8 547 aa15.72■□□□□ 0.11
COL11A1-204ENST00000427239 CCDC13Q8IYE1 715 aa15.72■□□□□ 0.11
COL11A1-204ENST00000427239 SYNPOQ8N3V7 929 aa15.72■□□□□ 0.11
COL11A1-204ENST00000427239 CCDC33Q8N5R6 958 aa15.72■□□□□ 0.11
COL11A1-204ENST00000427239 C1orf54Q8WWF1 131 aa15.72■□□□□ 0.11
COL11A1-204ENST00000427239 NKD2Q969F2 451 aaPredicted RBP15.72■□□□□ 0.11
COL11A1-204ENST00000427239 AP1M1Q9BXS5 423 aa15.72■□□□□ 0.11
COL11A1-204ENST00000427239 PDFQ9HBH1 243 aa15.72■□□□□ 0.11
COL11A1-204ENST00000427239 SLC8A2Q9UPR5 921 aa15.72■□□□□ 0.11
COL11A1-204ENST00000427239 DRG1Q9Y295 367 aaKnown RBP15.72■□□□□ 0.11
COL11A1-204ENST00000427239 NUP205Q92621 2012 aa15.72■□□□□ 0.11
COL11A1-204ENST00000427239 COL4A3Q01955 1670 aa15.71■□□□□ 0.11
COL11A1-204ENST00000427239 EGFP01133 1207 aa15.71■□□□□ 0.11
COL11A1-204ENST00000427239 CCNB1P14635 433 aa15.71■□□□□ 0.11
COL11A1-204ENST00000427239 CLCN6P51797 869 aa15.71■□□□□ 0.11
COL11A1-204ENST00000427239 PRKD1Q15139 912 aaPredicted RBP15.71■□□□□ 0.11
COL11A1-204ENST00000427239 CYP1B1Q16678 543 aa15.71■□□□□ 0.11
COL11A1-204ENST00000427239 MARC1Q5VT66 337 aa15.71■□□□□ 0.11
COL11A1-204ENST00000427239 DARS2Q6PI48 645 aaKnown RBP15.71■□□□□ 0.11
COL11A1-204ENST00000427239 CDKL3Q8IVW4 592 aaPredicted RBP15.71■□□□□ 0.11
COL11A1-204ENST00000427239 PRELID2Q8N945 189 aa15.71■□□□□ 0.11
COL11A1-204ENST00000427239 ATP11CQ8NB49 1132 aa15.71■□□□□ 0.11
COL11A1-204ENST00000427239 RPL10LQ96L21 214 aaKnown RBP15.71■□□□□ 0.11
COL11A1-204ENST00000427239 QKIQ96PU8 341 aaKnown RBP eCLIP15.71■□□□□ 0.11
COL11A1-204ENST00000427239 OSBPL6Q9BZF3 934 aa15.71■□□□□ 0.11
COL11A1-204ENST00000427239 THAP10Q9P2Z0 257 aaPredicted RBP15.71■□□□□ 0.11
COL11A1-204ENST00000427239 UBA2Q9UBT2 640 aaPredicted RBP15.71■□□□□ 0.11
COL11A1-204ENST00000427239 AMACRQ9UHK6 382 aa15.71■□□□□ 0.11
COL11A1-204ENST00000427239 FEZ2Q9UHY8 353 aaPredicted RBP15.71■□□□□ 0.11
COL11A1-204ENST00000427239 DNPEPQ9ULA0 475 aa15.71■□□□□ 0.11
COL11A1-204ENST00000427239 CHD5Q8TDI0 1954 aa15.71■□□□□ 0.11
COL11A1-204ENST00000427239 CFAP69A5D8W1 941 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 PEX11BO96011 259 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 MT-CO1P00395 513 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 ITGAVP06756 1048 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 CTSOP43234 321 aaPredicted RBP15.71■□□□□ 0.1
COL11A1-204ENST00000427239 KIR2DL1P43626 348 aaPredicted RBP15.71■□□□□ 0.1
COL11A1-204ENST00000427239 NUMBP49757 651 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 SERPINH1P50454 418 aaKnown RBP15.71■□□□□ 0.1
COL11A1-204ENST00000427239 MRPS21P82921 87 aaKnown RBP15.71■□□□□ 0.1
COL11A1-204ENST00000427239 LMNB2Q03252 620 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 CKAP4Q07065 602 aaKnown RBP15.71■□□□□ 0.1
COL11A1-204ENST00000427239 PTPRNQ16849 979 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 HEATR6Q6AI08 1181 aaKnown RBP15.71■□□□□ 0.1
COL11A1-204ENST00000427239 LINGO4Q6UY18 593 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 TRMT11Q7Z4G4 463 aaKnown RBP15.71■□□□□ 0.1
COL11A1-204ENST00000427239 SFTPA1Q8IWL2 248 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 ZNF687Q8N1G0 1237 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 BBS5Q8N3I7 341 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 SH2D3CQ8N5H7 860 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 C12orf50Q8NA57 414 aaPredicted RBP15.71■□□□□ 0.1
COL11A1-204ENST00000427239 CYB5D2Q8WUJ1 264 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 HTR3CQ8WXA8 447 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 SORCS1Q8WY21 1168 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 ATG4AQ8WYN0 398 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 MAML1Q92585 1016 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 EZH1Q92800 747 aaPredicted RBP15.71■□□□□ 0.1
COL11A1-204ENST00000427239 MAGOHBQ96A72 148 aaKnown RBP15.71■□□□□ 0.1
COL11A1-204ENST00000427239 ISG20Q96AZ6 181 aaKnown RBP15.71■□□□□ 0.1
COL11A1-204ENST00000427239 PKNOX2Q96KN3 472 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 VAT1Q99536 393 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 FAM118BQ9BPY3 351 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 LTB4R2Q9NPC1 389 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 HAUS2Q9NVX0 235 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 SMARCAL1Q9NZC9 954 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 NDRG2Q9UN36 371 aaKnown RBP15.71■□□□□ 0.1
COL11A1-204ENST00000427239 ZNF148Q9UQR1 794 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 MRFAP1Q9Y605 127 aa15.71■□□□□ 0.1
COL11A1-204ENST00000427239 CCDC188H7C350 402 aa15.7■□□□□ 0.1
COL11A1-204ENST00000427239 PDE2AO00408 941 aaPredicted RBP15.7■□□□□ 0.1
COL11A1-204ENST00000427239 ATP9BO43861 1147 aa15.7■□□□□ 0.1
COL11A1-204ENST00000427239 CD160O95971 181 aa15.7■□□□□ 0.1
COL11A1-204ENST00000427239 SRCP12931 536 aa15.7■□□□□ 0.1
COL11A1-204ENST00000427239 LRRC32Q14392 662 aa15.7■□□□□ 0.1
COL11A1-204ENST00000427239 LBRQ14739 615 aaKnown RBP15.7■□□□□ 0.1
COL11A1-204ENST00000427239 OASLQ15646 514 aaKnown RBP15.7■□□□□ 0.1
COL11A1-204ENST00000427239 HSF5Q4G112 596 aaPredicted RBP15.7■□□□□ 0.1
COL11A1-204ENST00000427239 TEX26Q8N6G2 289 aa15.7■□□□□ 0.1
COL11A1-204ENST00000427239 ZNF513Q8N8E2 541 aaPredicted RBP15.7■□□□□ 0.1
COL11A1-204ENST00000427239 MRGPRX3Q96LB0 322 aa15.7■□□□□ 0.1
COL11A1-204ENST00000427239 CEP44Q9C0F1 390 aa15.7■□□□□ 0.1
COL11A1-204ENST00000427239 SLCO3A1Q9UIG8 710 aa15.7■□□□□ 0.1
COL11A1-204ENST00000427239 KIAA1549LQ6ZVL6 1849 aa15.69■□□□□ 0.1
COL11A1-204ENST00000427239 FAM170BA6NMN3 283 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms